Clone Name | rbastl40g05 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | RNF14_HUMAN (Q9UBS8) RING finger protein 14 (Androgen receptor-a... | 28 | 8.7 | 2 | JAK3_MOUSE (Q62137) Tyrosine-protein kinase JAK3 (EC 2.7.10.2) (... | 28 | 8.7 | 3 | NRX2A_HUMAN (Q9P2S2) Neurexin-2-alpha precursor (Neurexin II-alpha) | 28 | 8.7 | 4 | MATK_WELMI (Q8MEW9) Maturase K (Intron maturase) | 28 | 8.7 |
---|
>RNF14_HUMAN (Q9UBS8) RING finger protein 14 (Androgen receptor-associated| protein 54) (Triad2 protein) (HFB30) Length = 474 Score = 28.5 bits (62), Expect = 8.7 Identities = 23/76 (30%), Positives = 34/76 (44%) Frame = +1 Query: 190 KSESTNSGRREYFLDLPRQFSEKKFLLLFQDLCLENLCPQICKVCYPKLKMHKL*AYLPP 369 K+ES G +LDLP+ F K F+ + CL+N + +C +LPP Sbjct: 27 KAESVQGGETRIYLDLPQNF--KIFVSGNSNECLQNSGFEY-TIC-----------FLPP 72 Query: 370 LHIHCVWDPDIRSRHP 417 L ++ PD S P Sbjct: 73 LVLNFELPPDYPSSSP 88
>JAK3_MOUSE (Q62137) Tyrosine-protein kinase JAK3 (EC 2.7.10.2) (Janus kinase| 3) (JAK-3) Length = 1299 Score = 28.5 bits (62), Expect = 8.7 Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 8/50 (16%) Frame = +1 Query: 274 FQDLCLENLCPQICKVCYPKLKMHKL*A--------YLPPLHIHCVWDPD 399 F D E+LC + K C H L A + PP HI C+ D D Sbjct: 45 FGDYLAEDLCVRAAKACAILPVYHSLFALATEDFSCWFPPSHIFCIEDVD 94
>NRX2A_HUMAN (Q9P2S2) Neurexin-2-alpha precursor (Neurexin II-alpha)| Length = 1712 Score = 28.5 bits (62), Expect = 8.7 Identities = 18/64 (28%), Positives = 30/64 (46%) Frame = -2 Query: 415 GGDF*CLDPTHNGCEVEVDMLRVCASST*GNKLYIFEDTSSPGINLGIAAGIFFPRIDVA 236 G +F C D +HN + D + + + N L + S+ +NL + +G + V Sbjct: 294 GNEFFCYDLSHNPIQSSTDEITLAFRTLQRNGLMLHTGKSADYVNLSLKSGAVWL---VI 350 Query: 235 NLGS 224 NLGS Sbjct: 351 NLGS 354
>MATK_WELMI (Q8MEW9) Maturase K (Intron maturase)| Length = 524 Score = 28.5 bits (62), Expect = 8.7 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = -3 Query: 126 FGRKVILQNTQMLVRKKEYADASIQQTSFFLA 31 FG K +L T +L++K Y QTSFF + Sbjct: 268 FGEKSVLIGTPILIKKYRYFFCHFWQTSFFFS 299 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,106,288 Number of Sequences: 219361 Number of extensions: 1345986 Number of successful extensions: 2330 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 2286 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2330 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2968155324 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)