ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl40g05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxyl... 78 3e-11
2dbj|AB182944.1| Triticum aestivum Wknox1b gene for KN1 homeobox ... 78 3e-11
3gb|AF277239.1|AF277239 Heteranthelium piliferum isolate H5557 di... 66 1e-07
4gb|AY821733.1| Triticum monococcum beta amylase gene, partial cds 64 4e-07
5gb|AY821732.1| Triticum baeoticum beta amylase gene, partial cds 64 4e-07
6gb|AF459639.1| Triticum monococcum BAC clones 116F2 and 115G1 ge... 62 2e-06
7gb|DQ146421.1| Triticum monococcum strain PI503874 VRN1 (VRN1) g... 60 7e-06
8gb|DQ146422.1| Triticum monococcum strain PI326317 VRN1 (VRN1) g... 60 7e-06
9gb|DQ146423.1| Triticum monococcum strain PI306540 VRN1 (VRN1) g... 60 7e-06
10gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A1... 60 7e-06
11gb|U60755.1|TAU60755 Triticum aestivum delta-24-sterol methyltra... 60 7e-06
12gb|DQ123819.1| Triticum turgidum floral homeotic homeoallele (q)... 56 1e-04
13gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence 52 0.002
14gb|DQ316901.1| Hordeum vulgare subsp. vulgare cultivar Priekulu ... 52 0.002
15gb|DQ316900.1| Hordeum vulgare subsp. vulgare cultivar Malva bet... 52 0.002
16gb|DQ316899.1| Hordeum vulgare subsp. vulgare cultivar Rasa beta... 52 0.002
17gb|DQ316898.1| Hordeum vulgare subsp. vulgare cultivar Kombainie... 52 0.002
18gb|DQ316897.1| Hordeum vulgare subsp. vulgare cultivar Ansis bet... 52 0.002
19gb|AF061203.1|AF061203 Hordeum vulgare cultivar Adorra beta-amyl... 52 0.002
20emb|X80068.1|HVBLZ1 H.vulgare blz-1 gene 50 0.006
21gb|DQ267106.1| Triticum urartu clone BAC 210J24 chromosome 4A, c... 48 0.025
22gb|AY848951.1| Thinopyrum elongatum Na+/H+ antiporter (NHX1) mRN... 44 0.40
23gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence 44 0.40
24gb|DQ175899.1| Hordeum vulgare subsp. vulgare clone 28-36A-RB fl... 44 0.40
25gb|AC112898.5| Rattus norvegicus 2 BAC CH230-157M2 (Children's H... 42 1.6
26gb|AE006816.1| Sulfolobus solfataricus P2 section 175 of 272 of ... 42 1.6
27gb|AC134166.2| Rattus norvegicus 2 BAC CH230-355N20 (Children's ... 42 1.6
28emb|Y08256.1|SS100KBFR S.solfataricus 100 kbp DNA fragment 42 1.6
29gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, geno... 42 1.6
30gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome 40 6.2
31ref|XM_732093.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 6.2
32ref|XM_739904.1| Plasmodium chabaudi chabaudi phosphatidylinosit... 40 6.2
33emb|AL391819.6| Human DNA sequence from clone RP11-8L13 on chrom... 40 6.2
34emb|AL161577.2|ATCHRIV73 Arabidopsis thaliana DNA chromosome 4, ... 40 6.2
35gb|AE009990.1| Streptococcus pyogenes strain MGAS8232, section 3... 40 6.2
36gb|AC068405.5| Homo sapiens chromosome 11, clone RP11-71F16, com... 40 6.2
37gb|AC092784.2| Homo sapiens chromosome 1 clone RP5-833A20, compl... 40 6.2
38dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
39dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
40gb|AC087549.2|AC087549 Oryza sativa (japonica cultivar-group) ch... 40 6.2
41gb|AC013595.11| Homo sapiens chromosome 11, clone RP11-8L12, com... 40 6.2
42dbj|AP001539.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
43gb|AF446141.1| Aegilops tauschii LZ-NBS-LRR class RGA, NBS-LRR c... 40 6.2
44gb|AF160182.1|F17I23 Arabidopsis thaliana BAC F17I23 40 6.2
45gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
46gb|AC131699.4| Mus musculus BAC clone RP23-440F17 from 1, comple... 40 6.2
47gb|AC167197.6| Mus musculus chromosome 1, clone RP23-62B14, comp... 40 6.2
48gb|M62740.1|BLYGLB2 Hordeum vulgare 1,3-1,4-beta-D glucan 4-gluc... 40 6.2 
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and
             SNF2P genes, complete cds; nucellin pseudogene, complete
             sequence; putative transposase, phosphatidylinositol
             phosphatidylcholine transfer protein sec14 cytosolic-like
             protein, and phytochrome P450-like protein genes, complete
             cds; and unknown genes
          Length = 438828

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 42/43 (97%)
 Strand = Plus / Minus

                                                        
Query: 131   ttgtcttagatttgtttagatacggatgtatctaacactaaaa 173
             |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 84399 ttgtcttacatttgtttagatacggatgtatctaacactaaaa 84357



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                               
Query: 125    aattagttgtcttagatttgtttagatacggatgtatctaacactaaaa 173
              ||||| ||||||||||||||| |||||||||| ||||||| ||||||||
Sbjct: 179941 aattacttgtcttagatttgtctagatacggaggtatctagcactaaaa 179893



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                         
Query: 122    ccaaattagttgtcttagatttgtttagatacggatgtatcta 164
              |||||||| |||| || ||||||| ||||||||||||||||||
Sbjct: 179796 ccaaattacttgttttggatttgtctagatacggatgtatcta 179838
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>dbj|AB182944.1| Triticum aestivum Wknox1b gene for KN1 homeobox protein, complete cds
          Length = 10847

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 45/47 (95%)
 Strand = Plus / Plus

                                                           
Query: 131  ttgtcttagatttgtttagatacggatgtatctaacactaaaacatg 177
            ||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 7277 ttgtcttagatttgtctagatacggatgtatctaatactaaaacatg 7323



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 131  ttgtcttagatttgtttagatacggatgtatc 162
            |||||||||| |||| || |||||||||||||
Sbjct: 7359 ttgtcttagaattgtctaaatacggatgtatc 7328
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>gb|AF277239.1|AF277239 Heteranthelium piliferum isolate H5557 disrupted meiotic cDNA 1
            protein (DMC1) gene, partial cds
          Length = 1293

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                         
Query: 133  gtcttagatttgtttagatacggatgtatctaacactaaaacatg 177
            |||||||||||||||||||| | |||| |||||||||||||||||
Sbjct: 1162 gtcttagatttgtttagatatgaatgtgtctaacactaaaacatg 1118



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                              
Query: 131  ttgtcttagatttgtttagatacggatgtatcta 164
            ||||| ||||||||| || |||||||||||||||
Sbjct: 1082 ttgtcatagatttgtctaaatacggatgtatcta 1115
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>gb|AY821733.1| Triticum monococcum beta amylase gene, partial cds
          Length = 1489

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                       
Query: 131 ttgtcttagatttgtttagatacggatgtatctaacactaaaac 174
           ||||||||||||||  ||||||||||||||||||| ||||||||
Sbjct: 513 ttgtcttagatttgcctagatacggatgtatctaatactaaaac 556



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 131 ttgtcttagatttgtttagatacggatgtatc 162
           ||||||||||||||| || |||||||||||||
Sbjct: 595 ttgtcttagatttgtctaaatacggatgtatc 564
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>gb|AY821732.1| Triticum baeoticum beta amylase gene, partial cds
          Length = 1536

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                       
Query: 131 ttgtcttagatttgtttagatacggatgtatctaacactaaaac 174
           ||||||||||||||  ||||||||||||||||||| ||||||||
Sbjct: 562 ttgtcttagatttgcctagatacggatgtatctaatactaaaac 605



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 131 ttgtcttagatttgtttagatacggatgtatc 162
           ||||||||||||||| || |||||||||||||
Sbjct: 644 ttgtcttagatttgtctaaatacggatgtatc 613
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>gb|AF459639.1| Triticum monococcum BAC clones 116F2 and 115G1 gene sequence
          Length = 215241

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                         
Query: 122    ccaaattagttgtcttagatttgtttagatacggatgtatcta 164
              |||||||| ||||||| ||||||| ||||||||||||||||||
Sbjct: 190938 ccaaattacttgtcttggatttgtctagatacggatgtatcta 190980



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                               
Query: 125    aattagttgtcttagatttgtttagatacggatgtatctaacactaaaa 173
              ||||| ||||||||||||||| ||||||||||  |||||| ||||||||
Sbjct: 191035 aattacttgtcttagatttgtctagatacggagatatctagcactaaaa 190987
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>gb|DQ146421.1| Triticum monococcum strain PI503874 VRN1 (VRN1) gene, complete cds
          Length = 16224

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                       
Query: 110 attaccttcctcccaaattagttgtcttagatttgtttagatacggatgtatctaacact 169
           ||||||| | ||| |||||| || ||||| |||||| ||||||||||  |||||||||||
Sbjct: 430 attacctccgtcctaaattatttatcttaaatttgtctagatacggagatatctaacact 371

                     
Query: 170 aaaacatgtc 179
           ||||| ||||
Sbjct: 370 aaaacgtgtc 361
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>gb|DQ146422.1| Triticum monococcum strain PI326317 VRN1 (VRN1) gene, complete cds
          Length = 15688

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                       
Query: 110 attaccttcctcccaaattagttgtcttagatttgtttagatacggatgtatctaacact 169
           ||||||| | ||| |||||| || ||||| |||||| ||||||||||  |||||||||||
Sbjct: 430 attacctccgtcctaaattatttatcttaaatttgtctagatacggagatatctaacact 371

                     
Query: 170 aaaacatgtc 179
           ||||| ||||
Sbjct: 370 aaaacgtgtc 361
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>gb|DQ146423.1| Triticum monococcum strain PI306540 VRN1 (VRN1) gene, complete cds
          Length = 16209

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                       
Query: 110 attaccttcctcccaaattagttgtcttagatttgtttagatacggatgtatctaacact 169
           ||||||| | ||| |||||| || ||||| |||||| ||||||||||  |||||||||||
Sbjct: 430 attacctccgtcctaaattatttatcttaaatttgtctagatacggagatatctaacact 371

                     
Query: 170 aaaacatgtc 179
           ||||| ||||
Sbjct: 370 aaaacgtgtc 361
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>gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A16, complete sequence
          Length = 133625

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                         
Query: 110   attaccttcctcccaaattagttgtcttagatttgtttagatacggatgtatctaacact 169
             ||||||| | ||| |||||| || ||||| |||||| ||||||||||  |||||||||||
Sbjct: 67468 attacctccgtcctaaattatttatcttaaatttgtctagatacggagatatctaacact 67409

                       
Query: 170   aaaacatgtc 179
             ||||| ||||
Sbjct: 67408 aaaacgtgtc 67399
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>gb|U60755.1|TAU60755 Triticum aestivum delta-24-sterol methyltransferase (TA-MT) gene,
           complete cds
          Length = 4749

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                 
Query: 136 ttagatttgtttagatacggatgtatctaacactaaaa 173
           |||||||||| ||||||||||||||||||||| |||||
Sbjct: 844 ttagatttgtctagatacggatgtatctaacattaaaa 807
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>gb|DQ123819.1| Triticum turgidum floral homeotic homeoallele (q) gene, complete
            sequence
          Length = 3321

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                    
Query: 125  aattagttgtcttagatttgtttagatacggatgtatcta 164
            ||||| |||||||| |||||| ||||||||||||||||||
Sbjct: 2852 aattacttgtcttaaatttgtctagatacggatgtatcta 2891
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>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence
          Length = 261265

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                
Query: 131    ttgtcttagatttgtttagatacggatgtatcta 164
              |||||||||||||||||||||| | |||||||||
Sbjct: 222812 ttgtcttagatttgtttagatatgaatgtatcta 222845
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>gb|DQ316901.1| Hordeum vulgare subsp. vulgare cultivar Priekulu 1 beta-amylase
           (Bmy1) gene, intron III
          Length = 1087

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 131 ttgtcttagatttgtttagatacggatgtatcta 164
           |||||||||||||||||||||| | |||||||||
Sbjct: 157 ttgtcttagatttgtttagatatgaatgtatcta 124
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>gb|DQ316900.1| Hordeum vulgare subsp. vulgare cultivar Malva beta-amylase (Bmy1)
           gene, intron III
          Length = 1083

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 131 ttgtcttagatttgtttagatacggatgtatcta 164
           |||||||||||||||||||||| | |||||||||
Sbjct: 157 ttgtcttagatttgtttagatatgaatgtatcta 124
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>gb|DQ316899.1| Hordeum vulgare subsp. vulgare cultivar Rasa beta-amylase (Bmy1)
           gene, intron III
          Length = 1081

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 131 ttgtcttagatttgtttagatacggatgtatcta 164
           |||||||||||||||||||||| | |||||||||
Sbjct: 157 ttgtcttagatttgtttagatatgaatgtatcta 124
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>gb|DQ316898.1| Hordeum vulgare subsp. vulgare cultivar Kombainieris beta-amylase
           (Bmy1) gene, intron III
          Length = 1081

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 131 ttgtcttagatttgtttagatacggatgtatcta 164
           |||||||||||||||||||||| | |||||||||
Sbjct: 157 ttgtcttagatttgtttagatatgaatgtatcta 124
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>gb|DQ316897.1| Hordeum vulgare subsp. vulgare cultivar Ansis beta-amylase (Bmy1)
           gene, intron III
          Length = 1081

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 131 ttgtcttagatttgtttagatacggatgtatcta 164
           |||||||||||||||||||||| | |||||||||
Sbjct: 157 ttgtcttagatttgtttagatatgaatgtatcta 124
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>gb|AF061203.1|AF061203 Hordeum vulgare cultivar Adorra beta-amylase (beta-amy1) gene,
            complete cds
          Length = 5126

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                              
Query: 131  ttgtcttagatttgtttagatacggatgtatcta 164
            |||||||||||||||||||||| | |||||||||
Sbjct: 2706 ttgtcttagatttgtttagatatgaatgtatcta 2673
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>emb|X80068.1|HVBLZ1 H.vulgare blz-1 gene
          Length = 4027

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 135  cttagatttgtttagatacggatgtatctaaca 167
            ||||||||| | |||||||||||||||||||||
Sbjct: 2883 cttagatttatctagatacggatgtatctaaca 2851
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>gb|DQ267106.1| Triticum urartu clone BAC 210J24 chromosome 4A, complete sequence
          Length = 111912

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 134   tcttagatttgtttagatacggatgtatctaacactaaaa 173
             ||||| |||| |||| ||||| ||||||||||||||||||
Sbjct: 58502 tcttaaatttatttaaatacgaatgtatctaacactaaaa 58541
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>gb|AY848951.1| Thinopyrum elongatum Na+/H+ antiporter (NHX1) mRNA, complete cds
          Length = 2024

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 134  tcttagatttgtttagatacggatgtatct 163
            |||||||||||| ||||||| |||||||||
Sbjct: 1964 tcttagatttgtctagatacagatgtatct 1935
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>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence
          Length = 211664

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 131   ttgtcttagatttgtttagatacggatgtatcta 164
             ||||||||||||||| || ||| |||||||||||
Sbjct: 30479 ttgtcttagatttgtctatatatggatgtatcta 30512
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>gb|DQ175899.1| Hordeum vulgare subsp. vulgare clone 28-36A-RB flanking T-DNA
           insertion sequence
          Length = 246

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 131 ttgtcttagatttgtttagatacggatgtatcta 164
           |||||||| ||||||||||||| | |||||||||
Sbjct: 102 ttgtcttacatttgtttagatatgaatgtatcta 69
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>gb|AC112898.5| Rattus norvegicus 2 BAC CH230-157M2 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 213379

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 388   tgggatccagacatcagaagt 408
             |||||||||||||||||||||
Sbjct: 77156 tgggatccagacatcagaagt 77176
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>gb|AE006816.1| Sulfolobus solfataricus P2 section 175 of 272 of the complete
           genome
          Length = 10029

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 140 atttgtttagatacggatgta 160
           |||||||||||||||||||||
Sbjct: 649 atttgtttagatacggatgta 669
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>gb|AC134166.2| Rattus norvegicus 2 BAC CH230-355N20 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 191583

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 388   tgggatccagacatcagaagt 408
             |||||||||||||||||||||
Sbjct: 25813 tgggatccagacatcagaagt 25793
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>emb|Y08256.1|SS100KBFR S.solfataricus 100 kbp DNA fragment
          Length = 100389

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 140   atttgtttagatacggatgta 160
             |||||||||||||||||||||
Sbjct: 22982 atttgtttagatacggatgta 23002
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>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence
          Length = 190469

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 122   ccaaattagttgtcttagatttgtttagatacg 154
             |||||||| | ||||||||||||| ||||||||
Sbjct: 93141 ccaaattactcgtcttagatttgtctagatacg 93109
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>gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome
          Length = 1937111

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 354    agcatatctacctccacttc 373
              ||||||||||||||||||||
Sbjct: 396697 agcatatctacctccacttc 396678
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>ref|XM_732093.1| Plasmodium chabaudi chabaudi hypothetical protein (PC300966.00.0)
           partial mRNA
          Length = 675

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 99  tattctgtagaattaccttc 118
           ||||||||||||||||||||
Sbjct: 94  tattctgtagaattaccttc 113
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>ref|XM_739904.1| Plasmodium chabaudi chabaudi phosphatidylinositol 4-kinase,
            (PC000459.02.0) partial mRNA
          Length = 2079

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 99   tattctgtagaattaccttc 118
            ||||||||||||||||||||
Sbjct: 1114 tattctgtagaattaccttc 1133
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>emb|AL391819.6| Human DNA sequence from clone RP11-8L13 on chromosome 9 Contains the 5'
             end of the TRPM3 gene for transient receptor potential
             cation channel subfamily M, member 3 (MLSN2, LTRPC3,
             FLJ11726) and a CpG island, complete sequence
          Length = 161802

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 329   ctaagttgaagatgcacaaa 348
             ||||||||||||||||||||
Sbjct: 94074 ctaagttgaagatgcacaaa 94093
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>emb|AL161577.2|ATCHRIV73 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 73
          Length = 194862

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 135   cttagatttgtttagatacg 154
             ||||||||||||||||||||
Sbjct: 49421 cttagatttgtttagatacg 49440
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>gb|AE009990.1| Streptococcus pyogenes strain MGAS8232, section 38 of 173 of the
            complete genome
          Length = 10729

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 354  agcatatctacctccacttc 373
            ||||||||||||||||||||
Sbjct: 7542 agcatatctacctccacttc 7523
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>gb|AC068405.5| Homo sapiens chromosome 11, clone RP11-71F16, complete sequence
          Length = 154774

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 331   aagttgaagatgcacaaactctaagcat 358
             |||||||||||||||| |||||| ||||
Sbjct: 85354 aagttgaagatgcacatactctatgcat 85381
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>gb|AC092784.2| Homo sapiens chromosome 1 clone RP5-833A20, complete sequence
          Length = 117613

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    ggtgccaagaaaaaagaggt 48
             ||||||||||||||||||||
Sbjct: 67859 ggtgccaagaaaaaagaggt 67878
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 211      ggaaggagggagtacttcct 230
                ||||||||||||||||||||
Sbjct: 16093183 ggaaggagggagtacttcct 16093164
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 124     aaattagttgtcttagatttgttt 147
               ||||||||||| ||||||||||||
Sbjct: 7486996 aaattagttgttttagatttgttt 7487019
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>gb|AC087549.2|AC087549 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0039C14,
              complete sequence
          Length = 135098

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 211    ggaaggagggagtacttcct 230
              ||||||||||||||||||||
Sbjct: 108288 ggaaggagggagtacttcct 108269
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>gb|AC013595.11| Homo sapiens chromosome 11, clone RP11-8L12, complete sequence
          Length = 92999

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 331   aagttgaagatgcacaaactctaagcat 358
             |||||||||||||||| |||||| ||||
Sbjct: 89420 aagttgaagatgcacatactctatgcat 89447
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>dbj|AP001539.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0708G02
          Length = 168976

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 124   aaattagttgtcttagatttgttt 147
             ||||||||||| ||||||||||||
Sbjct: 35788 aaattagttgttttagatttgttt 35811
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>gb|AF446141.1| Aegilops tauschii LZ-NBS-LRR class RGA, NBS-LRR class RGA, HCBT-like
             putative defense response protein, and putative alliin
             lyase genes, complete cds; and unknown genes
          Length = 106618

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 151   tacggatgtatctaacactaaaac 174
             ||||||| ||||||||||||||||
Sbjct: 54631 tacggatatatctaacactaaaac 54608
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>gb|AF160182.1|F17I23 Arabidopsis thaliana BAC F17I23
          Length = 134784

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 135   cttagatttgtttagatacg 154
             ||||||||||||||||||||
Sbjct: 51896 cttagatttgtttagatacg 51877
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 211      ggaaggagggagtacttcct 230
                ||||||||||||||||||||
Sbjct: 16101424 ggaaggagggagtacttcct 16101405
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>gb|AC131699.4| Mus musculus BAC clone RP23-440F17 from 1, complete sequence
          Length = 200544

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 335    tgaagatgcacaaactctaa 354
              ||||||||||||||||||||
Sbjct: 172065 tgaagatgcacaaactctaa 172046
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>gb|AC167197.6| Mus musculus chromosome 1, clone RP23-62B14, complete sequence
          Length = 220763

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 335    tgaagatgcacaaactctaa 354
              ||||||||||||||||||||
Sbjct: 154587 tgaagatgcacaaactctaa 154568
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>gb|M62740.1|BLYGLB2 Hordeum vulgare 1,3-1,4-beta-D glucan 4-glucanohydrolase (Glb 2)
            gene, intron 1
          Length = 5159

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 120  tcccaaattagttgtcttagattt 143
            |||||||||| |||||||||||||
Sbjct: 2687 tcccaaattaattgtcttagattt 2664


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,500,299
Number of Sequences: 3902068
Number of extensions: 4500299
Number of successful extensions: 78114
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77857
Number of HSP's gapped (non-prelim): 257
length of query: 461
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 439
effective length of database: 17,147,199,772
effective search space: 7527620699908
effective search space used: 7527620699908
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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