Clone Name | rbastl40g04 |
---|---|
Clone Library Name | barley_pub |
>PEM3_PHACH (P78733) Peroxidase manganese-dependent H3 precursor (EC 1.11.1.13)| Length = 380 Score = 30.0 bits (66), Expect = 2.4 Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 6/63 (9%) Frame = -3 Query: 362 DASKLLFPSVERAFSAGTG----ANHLT--VEMHLL*DSELLSTQTLFLAVCICPGLPYI 201 D S LLFP++E FSA G N+L ++ H + + T +A+ CPG P + Sbjct: 88 DGSMLLFPTIEPNFSANNGIDDSVNNLIPFMQKHNTISAGDIVQFTGAVALTNCPGAPQL 147 Query: 200 CFL 192 FL Sbjct: 148 EFL 150
>PEM1_PHACH (Q02567) Peroxidase manganese-dependent 1 precursor (EC 1.11.1.13)| (Peroxidase manganese-dependent I) (MnP-1) (MnP1) (Manganese peroxidase isozyme 1) Length = 378 Score = 29.3 bits (64), Expect = 4.1 Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 6/63 (9%) Frame = -3 Query: 362 DASKLLFPSVERAFSAGTG----ANHLT--VEMHLL*DSELLSTQTLFLAVCICPGLPYI 201 D S LLFP+VE FSA G N+L ++ H + L +A+ CPG P + Sbjct: 85 DGSMLLFPTVEPNFSANNGIDDSVNNLIPFMQKHNTISAADLVQFAGAVALSNCPGAPRL 144 Query: 200 CFL 192 FL Sbjct: 145 EFL 147
>TSN8_HUMAN (P19075) Tetraspanin-8 (Tspan-8) (Transmembrane 4 superfamily| member 3) (Tumor-associated antigen CO-029) Length = 237 Score = 29.3 bits (64), Expect = 4.1 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -1 Query: 202 FVFSFLFWLCHVGILLLEI 146 F F+FLFWLC + IL L I Sbjct: 13 FTFNFLFWLCGILILALAI 31
>ALF_BUCAP (Q8K9B2) Fructose-bisphosphate aldolase class 2 (EC 4.1.2.13)| (Fructose-bisphosphate aldolase class II) (FBP aldolase) Length = 359 Score = 28.9 bits (63), Expect = 5.4 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +3 Query: 36 TQRTTEINKESSTGNIAICANRIKQSKMIKM 128 T +++KE NIAIC+N +K+ K I M Sbjct: 140 TSHMIDLSKEHLKENIAICSNYLKKIKKINM 170
>METX_CHLCH (Q3ARA7) Homoserine O-acetyltransferase (EC 2.3.1.31) (Homoserine| O-trans-acetylase) (Homoserine transacetylase) (HTA) Length = 357 Score = 28.1 bits (61), Expect = 9.2 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = +2 Query: 314 QQRRHAPLMEIEAWMHHQGTK 376 QQ R L IE+++HHQG K Sbjct: 238 QQGRQGALFSIESYLHHQGRK 258 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,266,484 Number of Sequences: 219361 Number of extensions: 1091254 Number of successful extensions: 2616 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 2586 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2614 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2395157885 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)