>gb|AY483155.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA6)
            mRNA, complete cds
          Length = 3745

 Score =  198 bits (100), Expect = 2e-48
 Identities = 103/104 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    gatgcaacagctgccttatataaatagttggtgtcatagtgtataaatacaattctgaca 60
            ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 3729 gatgcaacagctgccttatataaattgttggtgtcatagtgtataaatacaattctgaca 3670

                                                        
Query: 61   tgatatactctaagcaacaaagaacaggtaccacaaatgggggc 104
            ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3669 tgatatactctaagcaacaaagaacaggtaccacaaatgggggc 3626

>emb|AL355333.18| Human DNA sequence from clone RP11-575N15 on chromosome 10, complete
              sequence
          Length = 180545

 Score = 42.1 bits (21), Expect = 0.34
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 70     ctaagcaacaaagaacaggta 90
              |||||||||||||||||||||
Sbjct: 106696 ctaagcaacaaagaacaggta 106716

>emb|AL353764.9| Human DNA sequence from clone RP11-440G5 on chromosome 9 Contains the
              NFIL3 gene for interleukin 3 regulated nuclear factor, a
              novel gene and two CpG islands, complete sequence
          Length = 170898

 Score = 42.1 bits (21), Expect = 0.34
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 18     atataaatagttggtgtcata 38
              |||||||||||||||||||||
Sbjct: 112748 atataaatagttggtgtcata 112768

>gb|AC147054.4| Pan troglodytes BAC clone RP43-145A1 from 7, complete sequence
          Length = 153627

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    ataaatagttggtgtcatag 39
             ||||||||||||||||||||
Sbjct: 64706 ataaatagttggtgtcatag 64687

>emb|AL353709.15| Human DNA sequence from clone RP11-379L12 on chromosome 1, complete
             sequence
          Length = 133418

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    tgtcatagtgtataaataca 51
             ||||||||||||||||||||
Sbjct: 55070 tgtcatagtgtataaataca 55089

>emb|AL157814.14| Human DNA sequence from clone RP11-285E18 on chromosome 13q22.1-22.3
             Contains a novel gene, complete sequence
          Length = 111350

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    taaatacaattctgacatga 63
             ||||||||||||||||||||
Sbjct: 28757 taaatacaattctgacatga 28776

>gb|AC097520.2| Homo sapiens BAC clone RP11-562F9 from 4, complete sequence
          Length = 173479

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 43    ataaatacaattctgacatgatat 66
             |||||||||||| |||||||||||
Sbjct: 81415 ataaatacaattatgacatgatat 81392

>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome
          Length = 2201561

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 79      aaagaacaggtaccacaaatggg 101
               ||||||||| |||||||||||||
Sbjct: 1875864 aaagaacagataccacaaatggg 1875886

>gb|AC113968.12| Mus musculus chromosome 8, clone RP23-120M17, complete sequence
          Length = 220191

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 5     caacagctgccttatataa 23
             |||||||||||||||||||
Sbjct: 39182 caacagctgccttatataa 39164

>emb|BX571867.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment
              9/17
          Length = 336609

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 8      cagctgccttatataaata 26
              |||||||||||||||||||
Sbjct: 203680 cagctgccttatataaata 203698

>emb|AJ427478.2|SSC427478 Sus scrofa ASIP gene for agouti signalling protein and AHCY gene for
              S-adenosylhomocysteine hydrolase
          Length = 204138

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 81     agaacaggtaccacaaatggggg 103
              |||||||| ||||||||||||||
Sbjct: 187688 agaacaggcaccacaaatggggg 187710

>gb|AC079601.25| Homo sapiens 12 BAC RP11-328C8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 96201

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 24    atagttggtgtcatagtgtataa 46
             ||||||||| |||||||||||||
Sbjct: 48624 atagttggtatcatagtgtataa 48602

>gb|DQ020207.1| Bambusa oldhamii cellulose synthase BoCesA1a mRNA, complete cds
          Length = 3547

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 31/35 (88%)
 Strand = Plus / Minus

                                               
Query: 63   atatactctaagcaacaaagaacaggtaccacaaa 97
            ||||||||||||||| | | |||||||| ||||||
Sbjct: 3507 atatactctaagcaatagacaacaggtatcacaaa 3473

>dbj|AB206998.1| Sus scrofa ASIP and AHCY genes for agouti signaling protein and
             S-adenosylhomocysteine hydrolase, complete cds
          Length = 127234

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 81    agaacaggtaccacaaatggggg 103
             |||||||| ||||||||||||||
Sbjct: 68706 agaacaggcaccacaaatggggg 68728

>gb|AC079227.12| Homo sapiens BAC clone RP11-80B23 from 4, complete sequence
          Length = 181942

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 40    tgtataaatacaattctga 58
             |||||||||||||||||||
Sbjct: 21595 tgtataaatacaattctga 21613

>gb|AC013437.8| Homo sapiens BAC clone RP11-190J23 from 2, complete sequence
          Length = 167424

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 50    caattctgacatgatatac 68
             |||||||||||||||||||
Sbjct: 28355 caattctgacatgatatac 28337

>emb|AL954149.19| Zebrafish DNA sequence from clone CH211-146G19 in linkage group 2,
             complete sequence
          Length = 163971

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 34    tcatagtgtataaatacaattct 56
             ||||||||||||||| |||||||
Sbjct: 12078 tcatagtgtataaatgcaattct 12056

>emb|BX088554.8| Zebrafish DNA sequence from clone DKEYP-4F12 in linkage group 20,
              complete sequence
          Length = 160766

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 42     tataaatacaattctgaca 60
              |||||||||||||||||||
Sbjct: 157067 tataaatacaattctgaca 157085

>emb|BX119992.6| Zebrafish DNA sequence from clone CH211-225H9 in linkage group 20,
            complete sequence
          Length = 174275

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 42   tataaatacaattctgaca 60
            |||||||||||||||||||
Sbjct: 1027 tataaatacaattctgaca 1045

>emb|CR954185.2| Medicago truncatula chromosome 5 clone mth4-20m5, COMPLETE SEQUENCE
          Length = 210708

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 77     acaaagaacaggtaccaca 95
              |||||||||||||||||||
Sbjct: 122952 acaaagaacaggtaccaca 122934

>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome
          Length = 2902619

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 48      tacaattctgacatgatat 66
               |||||||||||||||||||
Sbjct: 1885111 tacaattctgacatgatat 1885129


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,052,522
Number of Sequences: 3902068
Number of extensions: 1052522
Number of successful extensions: 69868
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69810
Number of HSP's gapped (non-prelim): 58
length of query: 117
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 96
effective length of database: 17,151,101,840
effective search space: 1646505776640
effective search space used: 1646505776640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)