>VG12_SHV21 (P24915) Hypothetical gene 12 protein|
          Length = 169

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = -3

Query: 198 SC*C*KRQMHCAAVESCMCFSAFHSFFCLDNICCKMNVMLYCKSIGRATARRVVPVLQE 22
           +C C  R  H        CF + H  FC      K  +M+ C S+ + ++    PVL++
Sbjct: 22  ACDCPSRVHHTCLQSHIQCFKSSHCTFCEK----KYKIMVMCNSLKKCSS----PVLEQ 72

>V55B_HHV7J (P52518) Hypothetical protein U55B|
          Length = 430

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 8/82 (9%)
 Frame = +3

Query: 12  K*GFPEELVPPCVLWLYLSTYSTALHSFYNKCCPSKRKNERPKNTYMIL------QLHNA 173
           K GF  E++P        +  S  +H  Y K C  KRK +      M+       +LH  
Sbjct: 243 KLGFVNEIIP--------NEISLTVHMHYFKICSDKRKIDVFFQDTMLFDEGETKKLHFK 294

Query: 174 FAFFSINKNHVLI--PRAEIQS 233
             F++ N N + +  P +++QS
Sbjct: 295 GTFYNFNANALYVPDPNSKVQS 316

>AT11B_RABIT (Q9N0Z4) Probable phospholipid-transporting ATPase IF (EC 3.6.3.1)|
            (ATPase class I type 11B) (ATPase IR)
            (RING-finger-binding protein) (Fragment)
          Length = 1169

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 13/45 (28%), Positives = 19/45 (42%)
 Frame = -3

Query: 180  RQMHCAAVESCMCFSAFHSFFCLDNICCKMNVMLYCKSIGRATAR 46
            RQ+H  + E         S  C+D++CC       C S+ R   R
Sbjct: 1087 RQLHPTSTEKAQLTETNSSIKCVDSLCCFPEGETTCTSVRRMLER 1131

>AT11B_HUMAN (Q9Y2G3) Probable phospholipid-transporting ATPase IF (EC 3.6.3.1)|
            (ATPase class I type 11B) (ATPase IR)
          Length = 1177

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 13/45 (28%), Positives = 18/45 (40%)
 Frame = -3

Query: 180  RQMHCAAVESCMCFSAFHSFFCLDNICCKMNVMLYCKSIGRATAR 46
            R +H  + E            CLD++CC       C S+GR   R
Sbjct: 1095 RHLHPTSTEKAQLTETNAGIKCLDSMCCFPEGEAACASVGRMLER 1139

>SYR_BUCBP (P59483) Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA|
           ligase) (ArgRS)
          Length = 578

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = +3

Query: 42  PCVLWLYLSTYSTALHSFYNKCCPSKRKNERPKNTYMILQLHNA 173
           P ++  YL   S     FY KC   K KN + +   ++L L  A
Sbjct: 517 PHIICKYLYELSKIFSKFYEKCSIYKSKNTKIRKNRLLLSLLTA 560

>MTR1A_CHICK (P49285) Melatonin receptor type 1A (MEL-1A-R) (CKA)|
          Length = 353

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
 Frame = +3

Query: 24  PEELVPPCVLWLYLSTYSTALHSFYNKCCPS-----KRKNERPKNTYMILQLHNAFAFFS 188
           PE ++P    WL++S+Y  A   ++N C  +       +N R +   +++    A AFF 
Sbjct: 268 PETIIPRIPEWLFVSSYYMA---YFNSCLNAIIYGLLNQNFRREYKKIVVSFCTAKAFFQ 324

Query: 189 INKN 200
            + N
Sbjct: 325 DSSN 328

>VATA_ARATH (O23654) Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14)|
           (V-ATPase subunit A) (Vacuolar proton pump alpha
           subunit) (V-ATPase 69 kDa subunit)
          Length = 623

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 15/25 (60%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = +3

Query: 42  PCVLWLY-LSTYSTALHSFYNKCCP 113
           P V WL   S YSTAL SFY K  P
Sbjct: 449 PSVNWLISYSKYSTALESFYEKFDP 473

>SYR_WIGBR (Q8D372) Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA|
           ligase) (ArgRS)
          Length = 576

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = +3

Query: 30  ELVPPCVLWLYLSTYSTALHSFYNKCCPSKRKNERPKNTYMILQL 164
           +L  P +L  YL   S     FY  C   K K E  KN+ + L +
Sbjct: 511 KLGTPHILCNYLYDLSKTFSVFYENCSIIKTKEESVKNSRLFLSI 555


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,891,018
Number of Sequences: 219361
Number of extensions: 880868
Number of successful extensions: 2112
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2112
length of database: 80,573,946
effective HSP length: 91
effective length of database: 60,612,095
effective search space used: 1454690280
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)