>gb|AF123535.1| Zea mays alcohol dehydrogenase 1 (adh1) gene, adh1-F allele, complete cds
          Length = 160480

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                    
Query: 226    tcttcgtcttcactcgactcgtcggacctccaccttgacccgcctttgccggct 279
              |||||||||||||| ||||||||||| |||||||||||| | ||||||| ||||
Sbjct: 126539 tcttcgtcttcactagactcgtcggatctccaccttgacacacctttgctggct 126486

>gb|AY691949.1| Zea mays alcohol dehydrogenase 1 (adh1A) gene, complete cds; Fourf
              copia_LTR and Huck gypsy_LTR retrotransposons, complete
              sequence; Opie2 copia_LTR retrotransposon Zeon gypsy_LTR
              and Opie1 copia_LTR retrotransposons, complete sequence; Ji
              copia_LTR retrotransposon, complete sequence; and unknown
              protein (adh1B), cyclin H-1 (adh1C), unknown protein
              (adh1D), hypothetical protein (adh1E), and unknown protein
              (adh1F) genes, complete cds
          Length = 126039

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                    
Query: 226    tcttcgtcttcactcgactcgtcggacctccaccttgacccgcctttgccggct 279
              |||||||||||||| ||||||||||| |||||||||||| | ||||||| ||||
Sbjct: 109870 tcttcgtcttcactagactcgtcggatctccaccttgacacacctttgctggct 109817

>gb|AY371488.1| Zea mays clone BAC 276N12-123C01, partial sequence
          Length = 213888

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                          
Query: 232    tcttcactcgactcgtcggacctccaccttgacccgcctttgccggctgctccttcacca 291
              |||||||| ||||| ||||| |||||||||||| | ||||||| |||| || || |||||
Sbjct: 194801 tcttcactagactcatcggatctccaccttgacacacctttgctggcttctgctccacca 194742

                  
Query: 292    actg 295
              ||||
Sbjct: 194741 actg 194738

>ref|XM_469639.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2196

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                   
Query: 226  tcttcgtcttcactcgactcgtcggacctccaccttgac 264
            |||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 1847 tcttcgtcttcactagactcatcggatctccaccttgac 1809

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                       
Query: 226      tcttcgtcttcactcgactcgtcggacctccaccttgac 264
                |||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 29923453 tcttcgtcttcactagactcatcggatctccaccttgac 29923491

>gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa0084L17, complete
             sequence
          Length = 159661

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                    
Query: 226   tcttcgtcttcactcgactcgtcggacctccaccttgac 264
             |||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 87153 tcttcgtcttcactagactcatcggatctccaccttgac 87115

>gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 genomic sequence, complete
             sequence
          Length = 139946

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                    
Query: 226   tcttcgtcttcactcgactcgtcggacctccaccttgac 264
             |||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 89394 tcttcgtcttcactagactcatcggatctccaccttgac 89432

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                       
Query: 226      tcttcgtcttcactcgactcgtcggacctccaccttgac 264
                |||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 30014875 tcttcgtcttcactagactcatcggatctccaccttgac 30014913

>gb|AF124045.1| Sorghum bicolor BAC clone 110K5, partial sequence
          Length = 78195

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                   
Query: 226   tcttcgtcttcactcgactcgtcggacctccaccttgacccgcctttgccggct 279
             ||||| |||||||| ||||| || || |||||||||||| | ||||||| ||||
Sbjct: 60174 tcttcatcttcactagactcatcagatctccaccttgacacacctttgctggct 60121

>gb|AC099705.7| Mus musculus chromosome 1, clone RP23-256I3, complete sequence
          Length = 166683

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 185   gggaagcgttgctctccatgta 206
             ||||||||||||||||||||||
Sbjct: 40133 gggaagcgttgctctccatgta 40154

>ref|XM_990329.1| PREDICTED: Mus musculus EF-hand domain (C-terminal) containing 1,
            transcript variant 1 (Efhc1), mRNA
          Length = 1845

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 185  gggaagcgttgctctccatgta 206
            ||||||||||||||||||||||
Sbjct: 1309 gggaagcgttgctctccatgta 1288

>ref|XM_990358.1| PREDICTED: Mus musculus EF-hand domain (C-terminal) containing 1,
            transcript variant 2 (Efhc1), mRNA
          Length = 2146

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 185  gggaagcgttgctctccatgta 206
            ||||||||||||||||||||||
Sbjct: 1610 gggaagcgttgctctccatgta 1589

>ref|XM_920333.2| PREDICTED: Mus musculus EF-hand domain (C-terminal) containing 1,
            transcript variant 4 (Efhc1), mRNA
          Length = 1845

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 185  gggaagcgttgctctccatgta 206
            ||||||||||||||||||||||
Sbjct: 1309 gggaagcgttgctctccatgta 1288

>ref|XM_907335.2| PREDICTED: Mus musculus EF-hand domain (C-terminal) containing 1,
            transcript variant 3 (Efhc1), mRNA
          Length = 2146

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 185  gggaagcgttgctctccatgta 206
            ||||||||||||||||||||||
Sbjct: 1610 gggaagcgttgctctccatgta 1589

>ref|XM_897162.2| PREDICTED: Mus musculus EF-hand domain (C-terminal) containing 1,
            transcript variant 2 (Efhc1), mRNA
          Length = 1845

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 185  gggaagcgttgctctccatgta 206
            ||||||||||||||||||||||
Sbjct: 1309 gggaagcgttgctctccatgta 1288

>ref|XM_129694.7| PREDICTED: Mus musculus EF-hand domain (C-terminal) containing 1,
            transcript variant 1 (Efhc1), mRNA
          Length = 2146

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 185  gggaagcgttgctctccatgta 206
            ||||||||||||||||||||||
Sbjct: 1610 gggaagcgttgctctccatgta 1589

>gb|AC156980.9| Mus musculus chromosome 1, clone RP23-191A12, complete sequence
          Length = 224673

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 185   gggaagcgttgctctccatgta 206
             ||||||||||||||||||||||
Sbjct: 19381 gggaagcgttgctctccatgta 19402

>dbj|AK006489.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:1700029F22 product:DJ304B14.2.1 (NOVEL
            PROTEIN ISOFORM 1) (FRAGMENT) homolog [Homo sapiens],
            full insert sequence
          Length = 2145

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 185  gggaagcgttgctctccatgta 206
            ||||||||||||||||||||||
Sbjct: 1611 gggaagcgttgctctccatgta 1590

>gb|AC129582.10| Mus musculus chromosome 5, clone RP24-485O24, complete sequence
          Length = 184794

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      attctctatctcccttgcat 21
              ||||||||||||||||||||
Sbjct: 153025 attctctatctcccttgcat 153044

>gb|AC139240.4| Mus musculus BAC clone RP24-128J14 from chromosome 18, complete
             sequence
          Length = 173054

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 44    aatatttccaagattatctc 63
             ||||||||||||||||||||
Sbjct: 41154 aatatttccaagattatctc 41135

>emb|BX511153.9| Zebrafish DNA sequence from clone DKEYP-66D1 in linkage group 2,
             complete sequence
          Length = 146969

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 331   attggagcttttgtcttctc 350
             ||||||||||||||||||||
Sbjct: 38970 attggagcttttgtcttctc 38989

>emb|AL844883.15| Zebrafish DNA sequence from clone DKEY-3J22 in linkage group 18, complete
              sequence
          Length = 189984

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 83     acacaaattaatgttcacat 102
              ||||||||||||||||||||
Sbjct: 145259 acacaaattaatgttcacat 145240

>gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete genome
          Length = 2056416

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 143     tgcatcatcttctggataat 162
               ||||||||||||||||||||
Sbjct: 1344972 tgcatcatcttctggataat 1344991


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,027,718
Number of Sequences: 3902068
Number of extensions: 3027718
Number of successful extensions: 55737
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55658
Number of HSP's gapped (non-prelim): 79
length of query: 380
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 358
effective length of database: 17,147,199,772
effective search space: 6138697518376
effective search space used: 6138697518376
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)