>RPN1_YEAST (P38764) 26S proteasome regulatory subunit RPN1 (Proteasome|
            non-ATPase subunit 1)
          Length = 992

 Score = 51.6 bits (122), Expect = 8e-07
 Identities = 24/33 (72%), Positives = 27/33 (81%)
 Frame = -1

Query: 424  GERAELATDKYIPLTSTLEGFVILKKNPEYHEE 326
            GERAEL TD+YI  TS +EG VILKKNP+Y EE
Sbjct: 959  GERAELETDEYISYTSHIEGVVILKKNPDYREE 991

>PSD2_MOUSE (Q8VDM4) 26S proteasome non-ATPase regulatory subunit 2 (26S|
           proteasome regulatory subunit RPN1) (26S proteasome
           regulatory subunit S2) (26S proteasome subunit p97)
          Length = 908

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 22/32 (68%), Positives = 28/32 (87%)
 Frame = -1

Query: 430 APGERAELATDKYIPLTSTLEGFVILKKNPEY 335
           A GERAELAT++++P+T  LEGFVIL+KNP Y
Sbjct: 875 AHGERAELATEEFLPVTPILEGFVILRKNPNY 906

>PSD2_HUMAN (Q13200) 26S proteasome non-ATPase regulatory subunit 2 (26S|
           proteasome regulatory subunit RPN1) (26S proteasome
           regulatory subunit S2) (26S proteasome subunit p97)
           (Tumor necrosis factor type 1 receptor-associated
           protein 2) (55.11 protein)
          Length = 908

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 22/32 (68%), Positives = 28/32 (87%)
 Frame = -1

Query: 430 APGERAELATDKYIPLTSTLEGFVILKKNPEY 335
           A GERAELAT++++P+T  LEGFVIL+KNP Y
Sbjct: 875 AHGERAELATEEFLPVTPILEGFVILRKNPNY 906

>RPN1_NEUCR (Q7S8R8) 26S proteasome regulatory subunit rpn-1|
          Length = 883

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 22/33 (66%), Positives = 27/33 (81%)
 Frame = -1

Query: 424 GERAELATDKYIPLTSTLEGFVILKKNPEYHEE 326
           GERAEL  D+YI L+STLEG VIL+KNP++  E
Sbjct: 850 GERAELEDDQYISLSSTLEGLVILRKNPDWEGE 882

>RPN1_CANGA (Q6FPV6) 26S proteasome regulatory subunit RPN1|
          Length = 983

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 21/33 (63%), Positives = 25/33 (75%)
 Frame = -1

Query: 424  GERAELATDKYIPLTSTLEGFVILKKNPEYHEE 326
            GERAEL  D+YI  T+ +EG VILKKNP + EE
Sbjct: 950  GERAELENDEYISYTNNIEGVVILKKNPNFQEE 982

>RPN1_SCHPO (P87048) 26S proteasome regulatory subunit rpn1 (Proteasome|
           non-ATPase subunit mts4) (19S regulatory cap region of
           26S protease subunit 2)
          Length = 891

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 22/28 (78%), Positives = 23/28 (82%)
 Frame = -1

Query: 421 ERAELATDKYIPLTSTLEGFVILKKNPE 338
           ERAELAT+ Y PLTS LEG VILKKN E
Sbjct: 859 ERAELATEAYTPLTS-LEGIVILKKNTE 885

>GLMS_TREPA (O83833) Glucosamine--fructose-6-phosphate aminotransferase|
           [isomerizing] (EC 2.6.1.16) (Hexosephosphate
           aminotransferase) (D-fructose-6-phosphate
           amidotransferase) (GFAT)
           (L-glutamine-D-fructose-6-phosphate amidotransferase)
           (Glucosamine-6-ph
          Length = 634

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -2

Query: 159 CN*LQSCLVARMDRHATCTHSGGHVGVELVVSFDLKLICICI 34
           CN  +S LV   D     TH+G  +GV    SF  +L+C+ +
Sbjct: 387 CNGARSTLVRESDA-VLLTHAGSEIGVASTKSFTTQLVCLLV 427

>BAR3_CHITE (Q03376) Balbiani ring protein 3 precursor|
          Length = 1700

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 346  SSSELQSPPTWRSGECTCQSPILLAPP 426
            +  +  SP TW    C+CQ P  + PP
Sbjct: 1391 AQKKCDSPKTWDENSCSCQCPKNMRPP 1417

>KR195_HUMAN (Q3LI72) Keratin-associated protein 19-5|
          Length = 72

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = +3

Query: 243 DDNLYLRACHAGELQKLASDQSLGGFPHSSWYSGFFFRITKPS 371
           DD  Y   C  G  ++L      GG+ + S + G+ +R  +PS
Sbjct: 19  DDLGYGYGCGCGSFRRLGYGGGYGGYGYGSGFGGYGYRSCRPS 61

>MURE_LISMO (Q8Y5L9) UDP-N-acetylmuramoylalanyl-D-glutamate--2,|
           6-diaminopimelate ligase (EC 6.3.2.13)
           (UDP-N-acetylmuramyl-tripeptide synthetase)
           (Meso-diaminopimelate-adding enzyme)
           (UDP-MurNAc-tripeptide synthetase)
          Length = 491

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
 Frame = +1

Query: 16  NFQYTLDTYTNKLKVKRHHQFNSYMSTRVGTSGMPVHSGNQTRLQLVTA---LVDGIKMF 186
           ++ +T++ Y N   +      NSY ++    + +        R+Q  TA   +  GIK  
Sbjct: 205 DYHHTMEEYANAKSLLFAQLGNSYHTSNPKIAVLNADDAESVRMQKATAAHIITFGIKQE 264

Query: 187 LDEPPANAEV*EHSEGSSVTT---TFTSEHAMLGN 282
            D   +N ++  H     + T    FT +  M+GN
Sbjct: 265 ADFQASNIKITSHGSTFDLGTPVGNFTLKIKMIGN 299

>DNAK_ANAVT (O05714) Chaperone protein dnaK (Heat shock protein 70) (Heat shock|
           70 kDa protein) (HSP70)
          Length = 688

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 220 EHSEGSSVTTTFTSEHAMLGNSKNLHQIKA*GVSLTPRGIP 342
           E+++ S        E  M G++K+L + K  G+   PRGIP
Sbjct: 425 ENNQNSVEIHVVQGEREMAGDNKSLGRFKLYGIPPAPRGIP 465

>DNAK1_ANASP (Q9ZEJ6) Chaperone protein dnaK1 (Heat shock protein 70-1) (Heat|
           shock 70 kDa protein 1) (HSP70-1)
          Length = 688

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 220 EHSEGSSVTTTFTSEHAMLGNSKNLHQIKA*GVSLTPRGIP 342
           E+++ S        E  M G++K+L + K  G+   PRGIP
Sbjct: 425 ENNQNSVEIHVVQGEREMAGDNKSLGRFKLYGIPPAPRGIP 465

>PHSA_SALTY (P37600) Thiosulfate reductase precursor (EC 1.-.-.-)|
          Length = 758

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 2   SSKDVTFSTHLIHIQISLRSKDTTSSTPTCP 94
           SSK  + S+HL H+  +  S +T +   TCP
Sbjct: 145 SSKSGSLSSHLFHLATAFGSPNTFTHASTCP 175

>CATA_ASPFU (P78574) Catalase A (EC 1.11.1.6) (Fast catalase)|
          Length = 750

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -2

Query: 315 PLGFDLMQVFGVPQHGMLGGKGCRHGGSFTMLLHLGI 205
           P  + +MQ FGV    ++  +G RH   F  + HLG+
Sbjct: 228 PRSYRMMQGFGVNTFALVNKEGKRHFVKFHWIPHLGV 264

>CATA_EMENI (P55305) Catalase A (EC 1.11.1.6) (Spore-specific catalase)|
          Length = 744

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -2

Query: 315 PLGFDLMQVFGVPQHGMLGGKGCRHGGSFTMLLHLGI 205
           P  + +MQ FGV    ++  +G RH   F  + HLG+
Sbjct: 228 PRSYRMMQGFGVNTFSLVNKEGKRHFVKFHWIPHLGV 264

>LPQT_MYCLE (Q9CD47) Putative lipoprotein lpqT precursor|
          Length = 218

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +1

Query: 238 SVTTTFTSEHAMLGNSKNLHQIKA*GVSLTPRGIPGSSSELQSPPTW 378
           S TTT T+    +   + L  I   G  + P  +PG +  + +PP W
Sbjct: 38  SSTTTTTTPDKPIPLPQYLESIGVTGQQVAPSSLPGLTVSIPTPPGW 84

>DNAK_CORJK (Q4JXX6) Chaperone protein dnaK (Heat shock protein 70) (Heat shock|
           70 kDa protein) (HSP70)
          Length = 620

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 18/75 (24%), Positives = 33/75 (44%)
 Frame = +1

Query: 118 PVHSGNQTRLQLVTALVDGIKMFLDEPPANAEV*EHSEGSSVTTTFTSEHAMLGNSKNLH 297
           P+  G +T+  ++T L++       +        E S+ S     F  E  M  ++K L 
Sbjct: 370 PLSLGIETKGGVMTKLIERNTTIPTKRSETFTTAEDSQPSVQIQVFQGEREMAAHNKLLG 429

Query: 298 QIKA*GVSLTPRGIP 342
             +  G++  PRG+P
Sbjct: 430 SFELAGIAPAPRGVP 444

>DYHC_YEAST (P36022) Dynein heavy chain, cytosolic (DYHC)|
          Length = 4092

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
 Frame = -3

Query: 380  LHVGGLCNSEEEPG-IPRGVRETP*ALI*CKFLEFPS-MACSEV-----KVVVTEDPSLC 222
            +H+ G CN   +PG IP   R T  A I   +L +PS  + S++     K +    P   
Sbjct: 2529 IHIVGACNPPTDPGRIPMSERFTRHAAI--LYLGYPSGKSLSQIYEIYYKAIFKLVPEFR 2586

Query: 221  SYTSAFAGGS 192
            SYT  FA  S
Sbjct: 2587 SYTEPFARAS 2596

>SALM_DROME (P39770) Homeotic protein spalt-major|
          Length = 1365

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
 Frame = +1

Query: 196  PPANAEV*EHSEGSSVTTTFTSEHAML-----GNSKNLHQIKA*GVSLTPRGIPGSSSEL 360
            P ++A    HS GS+   T  S HA        +S    +     + LTPR  P SSS  
Sbjct: 1038 PRSSASSHGHSVGSTSAPTSPSVHASSQVIKRSSSPARSEASQGALDLTPRAAPTSSSSS 1097

Query: 361  QSP 369
            +SP
Sbjct: 1098 RSP 1100

>DNAK_PSESG (Q9WWG9) Chaperone protein dnaK (Heat shock protein 70) (Heat shock|
           70 kDa protein) (HSP70)
          Length = 638

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 17/75 (22%), Positives = 31/75 (41%)
 Frame = +1

Query: 118 PVHSGNQTRLQLVTALVDGIKMFLDEPPANAEV*EHSEGSSVTTTFTSEHAMLGNSKNLH 297
           P+  G +    ++TAL+     FL   P+     ++ E +        E    G +K+L 
Sbjct: 396 PLTLGIEAMGGVMTALIKKTPRFLPRNPSVLTADDNQENAVAIHVLQGERKQAGQNKSLG 455

Query: 298 QIKA*GVSLTPRGIP 342
           +     +   PRG+P
Sbjct: 456 KFDLAEIPPAPRGVP 470


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,191,907
Number of Sequences: 219361
Number of extensions: 1581342
Number of successful extensions: 4432
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4431
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)