Clone Information

BLAST Search Result

Clone Name	rbastl40e10
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ref\|XM_506148.1\| PREDICTED Oryza sativa (japonica cultivar-group...	48	0.022
2	ref\|XM_476451.1\| Oryza sativa (japonica cultivar-group), mRNA	48	0.022
3	dbj\|AP008213.1\| Oryza sativa (japonica cultivar-group) genomic D...	48	0.022
4	dbj\|AP005309.5\| Oryza sativa (japonica cultivar-group) genomic D...	48	0.022
5	dbj\|AK101000.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	48	0.022
6	dbj\|AK070529.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	48	0.022
7	dbj\|AP008208.1\| Oryza sativa (japonica cultivar-group) genomic D...	46	0.086
8	dbj\|AP004885.3\| Oryza sativa (japonica cultivar-group) genomic D...	46	0.086
9	emb\|CR356239.11\| Zebrafish DNA sequence from clone DKEY-147F3 in...	44	0.34
10	ref\|NM_131386.1\| Danio rerio DNA (cytosine-5-)-methyltransferase...	44	0.34
11	dbj\|AB196914.1\| Danio rerio dnmt3 mRNA for DNA methyltransferase...	44	0.34
12	emb\|AL627127.20\| Mouse DNA sequence from clone RP23-360O1 on chr...	44	0.34
13	gb\|AC124348.5\| Mus musculus BAC clone RP24-462O9 from chromosome...	42	1.3
14	gb\|AC132406.4\| Mus musculus BAC clone RP23-340E1 from chromosome...	42	1.3
15	gb\|AC133572.35\| Medicago truncatula clone mth2-10o11, complete s...	42	1.3
16	gb\|AC027333.5\| Homo sapiens chromosome 5 clone CTD-2194F12, comp...	42	1.3
17	gb\|AC008282.4\| Homo sapiens BAC clone RP11-516B14 from 2, comple...	42	1.3
18	emb\|AL109758.3\|CNS018OV Human chromosome 14 DNA sequence BAC R-8...	42	1.3
19	gb\|AC161269.4\| Mus musculus BAC clone RP23-120K16 from chromosom...	40	5.3
20	ref\|XM_747007.1\| Aspergillus fumigatus Af293 hypothetical protei...	40	5.3
21	gb\|AC116657.3\| Mus musculus BAC clone RP23-289E18 from 15, compl...	40	5.3
22	gb\|AC018977.9\| Homo sapiens chromosome 10 clone RP11-386C23, com...	40	5.3
23	emb\|AL096712.20\|HSJ744I24 Human DNA sequence from clone RP4-744I...	40	5.3
24	emb\|AL731607.3\|OSJN00250 Oryza sativa genomic DNA, chromosome 4,...	40	5.3
25	emb\|AL592105.14\| Zebrafish DNA sequence from clone BUSM1-150L22 ...	40	5.3
26	emb\|AL606455.3\|OSJN00015 Oryza sativa genomic DNA, chromosome 4,...	40	5.3
27	emb\|AL591382.3\| Zebrafish DNA sequence from clone BUSM1-105L16 i...	40	5.3
28	emb\|CR545467.4\| Zebrafish DNA sequence from clone CH211-196P10 i...	40	5.3
29	dbj\|AP007154.1\| Aspergillus oryzae RIB40 genomic DNA, SC001	40	5.3
30	gb\|AC100840.2\| Homo sapiens chromosome 15, clone RP11-537K8, com...	40	5.3
31	gb\|AC090257.5\| Homo sapiens chromosome 15, clone RP11-301A18, co...	40	5.3
32	gb\|AC079208.4\| Homo sapiens chromosome 15, clone RP11-1149K15, c...	40	5.3
33	gb\|AC021541.7\| Homo sapiens chromosome 15, clone RP11-505L16, co...	40	5.3
34	gb\|AC154841.2\| Mus musculus BAC clone RP23-61I24 from chromosome...	40	5.3
35	gb\|AC018787.5\|AC018787 Homo sapiens, clone RP11-22O12, complete ...	40	5.3
36	emb\|CR352703.1\| Gallus gallus finished cDNA, clone ChEST39m24	40	5.3
37	dbj\|AP008210.1\| Oryza sativa (japonica cultivar-group) genomic D...	40	5.3
38	gb\|AC150560.5\| Mus musculus BAC clone RP23-16I14 from 15, comple...	40	5.3
39	emb\|CR848841.19\| Zebrafish DNA sequence from clone DKEY-202I12 i...	40	5.3
40	emb\|AL732339.3\| Oryza sativa genomic DNA, chromosome 4, BAC clon...	40	5.3

>ref|XM_506148.1| PREDICTED Oryza sativa (japonica cultivar-group), P0474G09.102 mRNA
          Length = 3214

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 364  acctgctcaggctcaccatgcgtgcacc 391
            ||||| ||||||||||||||||||||||
Sbjct: 2961 acctgttcaggctcaccatgcgtgcacc 2934

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>ref|XM_476451.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3207

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 364  acctgctcaggctcaccatgcgtgcacc 391
            ||||| ||||||||||||||||||||||
Sbjct: 2954 acctgttcaggctcaccatgcgtgcacc 2927

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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                           
Query: 364     acctgctcaggctcaccatgcgtgcacc 391
               ||||| ||||||||||||||||||||||
Sbjct: 1277464 acctgttcaggctcaccatgcgtgcacc 1277437

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>dbj|AP005309.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0474G09
          Length = 169511

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 364   acctgctcaggctcaccatgcgtgcacc 391
             ||||| ||||||||||||||||||||||
Sbjct: 42299 acctgttcaggctcaccatgcgtgcacc 42272

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>dbj|AK101000.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023147D18, full
            insert sequence
          Length = 3206

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 364  acctgctcaggctcaccatgcgtgcacc 391
            ||||| ||||||||||||||||||||||
Sbjct: 2953 acctgttcaggctcaccatgcgtgcacc 2926

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>dbj|AK070529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060K11, full
            insert sequence
          Length = 3214

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 364  acctgctcaggctcaccatgcgtgcacc 391
            ||||| ||||||||||||||||||||||
Sbjct: 2961 acctgttcaggctcaccatgcgtgcacc 2934

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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 365     cctgctcaggctcaccatgcgtgcacc 391
               |||| ||||||||||||||||||||||
Sbjct: 1222713 cctgttcaggctcaccatgcgtgcacc 1222687

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>dbj|AP004885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0575F10
          Length = 150462

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 365   cctgctcaggctcaccatgcgtgcacc 391
             |||| ||||||||||||||||||||||
Sbjct: 53804 cctgttcaggctcaccatgcgtgcacc 53778

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>emb|CR356239.11| Zebrafish DNA sequence from clone DKEY-147F3 in linkage group 23,
              complete sequence
          Length = 110120

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 193    cagattcagatcagaaaactcaattt 218
              |||| |||||||||||||||||||||
Sbjct: 105581 cagaatcagatcagaaaactcaattt 105606

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>ref|NM_131386.1| Danio rerio DNA (cytosine-5-)-methyltransferase 3 (dnmt3), mRNA
          Length = 4882

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 193  cagattcagatcagaaaactcaattt 218
            |||| |||||||||||||||||||||
Sbjct: 1225 cagaatcagatcagaaaactcaattt 1200

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>dbj|AB196914.1| Danio rerio dnmt3 mRNA for DNA methyltransferase, complete cds
          Length = 4882

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 193  cagattcagatcagaaaactcaattt 218
            |||| |||||||||||||||||||||
Sbjct: 1225 cagaatcagatcagaaaactcaattt 1200

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>emb|AL627127.20| Mouse DNA sequence from clone RP23-360O1 on chromosome 4, complete
              sequence
          Length = 188629

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 86     tttgtcaaatgtaggagtgtgc 107
              ||||||||||||||||||||||
Sbjct: 105001 tttgtcaaatgtaggagtgtgc 104980

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>gb|AC124348.5| Mus musculus BAC clone RP24-462O9 from chromosome 9, complete sequence
          Length = 187568

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 353   ttctaatctctacctgctcaggctc 377
             ||||| |||||||||||||||||||
Sbjct: 72913 ttctattctctacctgctcaggctc 72937

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>gb|AC132406.4| Mus musculus BAC clone RP23-340E1 from chromosome 9, complete sequence
          Length = 222617

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 353    ttctaatctctacctgctcaggctc 377
              ||||| |||||||||||||||||||
Sbjct: 193207 ttctattctctacctgctcaggctc 193183

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>gb|AC133572.35| Medicago truncatula clone mth2-10o11, complete sequence
          Length = 108164

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 204   cagaaaactcaatttgagttt 224
             |||||||||||||||||||||
Sbjct: 65393 cagaaaactcaatttgagttt 65373

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>gb|AC027333.5| Homo sapiens chromosome 5 clone CTD-2194F12, complete sequence
          Length = 180529

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 251   tttctaatttatggaagaaaa 271
             |||||||||||||||||||||
Sbjct: 91889 tttctaatttatggaagaaaa 91909

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>gb|AC008282.4| Homo sapiens BAC clone RP11-516B14 from 2, complete sequence
          Length = 203241

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 255    taatttatggaagaaaactag 275
              |||||||||||||||||||||
Sbjct: 202315 taatttatggaagaaaactag 202295

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>emb|AL109758.3|CNS018OV Human chromosome 14 DNA sequence BAC R-873E2 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 209512

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 251    tttctaatttatggaagaaaa 271
              |||||||||||||||||||||
Sbjct: 160361 tttctaatttatggaagaaaa 160381

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>gb|AC161269.4| Mus musculus BAC clone RP23-120K16 from chromosome 15, complete
             sequence
          Length = 206234

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 215   atttgagtttcctgacaggt 234
             ||||||||||||||||||||
Sbjct: 44931 atttgagtttcctgacaggt 44912

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>ref|XM_747007.1| Aspergillus fumigatus Af293 hypothetical protein (Afu4g07260)
           partial mRNA
          Length = 2919

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 21  tcgcaacaaaatcagccaca 40
           ||||||||||||||||||||
Sbjct: 564 tcgcaacaaaatcagccaca 583

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>gb|AC116657.3| Mus musculus BAC clone RP23-289E18 from 15, complete sequence
          Length = 184557

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 206   gaaaactcaatttgagtttc 225
             ||||||||||||||||||||
Sbjct: 23022 gaaaactcaatttgagtttc 23003

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>gb|AC018977.9| Homo sapiens chromosome 10 clone RP11-386C23, complete sequence
          Length = 222810

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 244    tggaggatttctaatttatggaagaaaa 271
              ||||||||||||||||||  ||||||||
Sbjct: 154073 tggaggatttctaatttacagaagaaaa 154046

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>emb|AL096712.20|HSJ744I24 Human DNA sequence from clone RP4-744I24 on chromosome 6p12.1-21.2
              Contains the 3' end of the TBC1D22B gene for TBC1 domain
              family member 22B, the RNF8 gene for ring finger protein
              (C3HC4 type) 8 (KIAA0646) and a CpG island, complete
              sequence
          Length = 120515

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 85     ttttgtcaaatgtaggagtg 104
              ||||||||||||||||||||
Sbjct: 101554 ttttgtcaaatgtaggagtg 101535

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>emb|AL731607.3|OSJN00250 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0063C18,
             complete sequence
          Length = 150416

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 98    aggagtgtgcacatggtcct 117
             ||||||||||||||||||||
Sbjct: 15164 aggagtgtgcacatggtcct 15145

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>emb|AL592105.14| Zebrafish DNA sequence from clone BUSM1-150L22 in linkage group 7
             Contains the 3' part of the men1 gene (multiple endocrine
             neoplasia type 1 (menin 1)), a gene for a novel protein
             kinase, three genes for novel immune-type receptor, a
             novel immune-type receptor pseudogene, the nitr4.2,
             nitr5.3 and nitr1.23 genes (novel immune-type receptor
             4.2, 5.3 and 1.23), a novel gene and a CpG island,
             complete sequence
          Length = 106023

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 218   tgagtttcctgacaggttcagaac 241
             |||||||| |||||||||||||||
Sbjct: 76888 tgagtttcgtgacaggttcagaac 76911

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>emb|AL606455.3|OSJN00015 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0079B02,
             complete sequence
          Length = 126659

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 98    aggagtgtgcacatggtcct 117
             ||||||||||||||||||||
Sbjct: 50750 aggagtgtgcacatggtcct 50731

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>emb|AL591382.3| Zebrafish DNA sequence from clone BUSM1-105L16 in linkage group 7
            Contains the nitr2d_1 gene for novel immune-type receptor
            2d, allele 1, the nitr1o_3 gene for novel immune-type
            receptor 1o, allele 3, the nitr1m_2 gene for novel
            immune-type receptor 1m, allele 2, the nitr1l_2 gene for
            novel immune-type receptor 1l, allele 2, a novel
            immune-type receptor 1 pseudogene, the nitr5_4 gene for
            novel immune-type receptor 5, allele 4, the nitr4a_2 gene
            for novel immune-type receptor 4a, allele 2, the nitr1i_2
            gene for novel immune-type receptor 1i, allele 2, the
            nitr1j_1 gene for novel immune-type receptor 1j, allele
            1, the nitr1g_1 gene for novel immune-type receptor 1g,
            allele 1, a novel immune-type receptor 4b pseudogene, a
            novel gene, the nitr1k_3 gene for novel immune-type
            receptor 1k, allele 3 and a CpG island, complete sequence
          Length = 98934

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 218  tgagtttcctgacaggttcagaac 241
            |||||||| |||||||||||||||
Sbjct: 4038 tgagtttcgtgacaggttcagaac 4061

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>emb|CR545467.4| Zebrafish DNA sequence from clone CH211-196P10 in linkage group 16,
              complete sequence
          Length = 161708

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 353    ttctaatctctacctgctca 372
              ||||||||||||||||||||
Sbjct: 114488 ttctaatctctacctgctca 114507

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>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001
          Length = 2005935

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 290     tttttcctaatggagtgctt 309
               ||||||||||||||||||||
Sbjct: 1591956 tttttcctaatggagtgctt 1591937

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>gb|AC100840.2| Homo sapiens chromosome 15, clone RP11-537K8, complete sequence
          Length = 174287

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 202   atcagaaaactcaatttgag 221
             ||||||||||||||||||||
Sbjct: 99453 atcagaaaactcaatttgag 99434

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>gb|AC090257.5| Homo sapiens chromosome 15, clone RP11-301A18, complete sequence
          Length = 159299

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 79    aaacctttttgtcaaatgta 98
             ||||||||||||||||||||
Sbjct: 35717 aaacctttttgtcaaatgta 35736

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>gb|AC079208.4| Homo sapiens chromosome 15, clone RP11-1149K15, complete sequence
          Length = 168252

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 79     aaacctttttgtcaaatgta 98
              ||||||||||||||||||||
Sbjct: 155125 aaacctttttgtcaaatgta 155144

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>gb|AC021541.7| Homo sapiens chromosome 15, clone RP11-505L16, complete sequence
          Length = 194023

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 202    atcagaaaactcaatttgag 221
              ||||||||||||||||||||
Sbjct: 169250 atcagaaaactcaatttgag 169269

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>gb|AC154841.2| Mus musculus BAC clone RP23-61I24 from chromosome 14, complete sequence
          Length = 211666

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 126    caatgcaaaacagaaaactc 145
              ||||||||||||||||||||
Sbjct: 144227 caatgcaaaacagaaaactc 144208

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>gb|AC018787.5|AC018787 Homo sapiens, clone RP11-22O12, complete sequence
          Length = 90722

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 79    aaacctttttgtcaaatgta 98
             ||||||||||||||||||||
Sbjct: 41736 aaacctttttgtcaaatgta 41755

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>emb|CR352703.1| Gallus gallus finished cDNA, clone ChEST39m24
          Length = 1331

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 263  ggaagaaaactagtgcctca 282
            ||||||||||||||||||||
Sbjct: 1022 ggaagaaaactagtgcctca 1041

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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 98       aggagtgtgcacatggtcct 117
                ||||||||||||||||||||
Sbjct: 32655729 aggagtgtgcacatggtcct 32655710

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>gb|AC150560.5| Mus musculus BAC clone RP23-16I14 from 15, complete sequence
          Length = 208801

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 215    atttgagtttcctgacaggt 234
              ||||||||||||||||||||
Sbjct: 149367 atttgagtttcctgacaggt 149348

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>emb|CR848841.19| Zebrafish DNA sequence from clone DKEY-202I12 in linkage group 16,
              complete sequence
          Length = 205755

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 353    ttctaatctctacctgctca 372
              ||||||||||||||||||||
Sbjct: 156039 ttctaatctctacctgctca 156058

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>emb|AL732339.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0414F07, complete
             sequence
          Length = 50928

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 98    aggagtgtgcacatggtcct 117
             ||||||||||||||||||||
Sbjct: 31804 aggagtgtgcacatggtcct 31785


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,950,873
Number of Sequences: 3902068
Number of extensions: 3950873
Number of successful extensions: 72192
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72055
Number of HSP's gapped (non-prelim): 137
length of query: 395
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 373
effective length of database: 17,147,199,772
effective search space: 6395905514956
effective search space used: 6395905514956
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result