>gb|BT019236.1| Zea mays clone Contig909.F mRNA sequence
          Length = 1329

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 341 ccctgttgctttcctccataaccatgtctgg 371
           |||||||| ||||| ||||||||||||||||
Sbjct: 321 ccctgttgttttccaccataaccatgtctgg 351

>gb|AY106756.1| Zea mays PCO095940 mRNA sequence
          Length = 974

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 341 ccctgttgctttcctccataaccatgtctgg 371
           |||||||| ||||| ||||||||||||||||
Sbjct: 576 ccctgttgttttccaccataaccatgtctgg 546

>ref|XM_483606.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3172

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                        
Query: 306  atcttcttgaactgtattcagtccctgcagatctgccctgttgctttcctccataaccat 365
            ||||||| ||| ||||| ||| ||| | ||| || ||||||||||| || ||||||||||
Sbjct: 2804 atcttctggaaatgtatgcaggccccgtagaccttccctgttgcttcccaccataaccat 2745

                  
Query: 366  gtctgg 371
            | ||||
Sbjct: 2744 gcctgg 2739



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 61   ggttgcaaaacttcctcggtatttt 85
            ||||||||||||||||| |||||||
Sbjct: 3037 ggttgcaaaacttcctcagtatttt 3013

>dbj|AK101733.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061H08, full
            insert sequence
          Length = 1855

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                        
Query: 306  atcttcttgaactgtattcagtccctgcagatctgccctgttgctttcctccataaccat 365
            ||||||| ||| ||||| ||| ||| | ||| || ||||||||||| || ||||||||||
Sbjct: 1622 atcttctggaaatgtatgcaggccccgtagaccttccctgttgcttcccaccataaccat 1563

                  
Query: 366  gtctgg 371
            | ||||
Sbjct: 1562 gcctgg 1557



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 61   ggttgcaaaacttcctcggtatttt 85
            ||||||||||||||||| |||||||
Sbjct: 1855 ggttgcaaaacttcctcagtatttt 1831

>dbj|AK066525.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072L17, full
            insert sequence
          Length = 3173

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                        
Query: 306  atcttcttgaactgtattcagtccctgcagatctgccctgttgctttcctccataaccat 365
            ||||||| ||| ||||| ||| ||| | ||| || ||||||||||| || ||||||||||
Sbjct: 2804 atcttctggaaatgtatgcaggccccgtagaccttccctgttgcttcccaccataaccat 2745

                  
Query: 366  gtctgg 371
            | ||||
Sbjct: 2744 gcctgg 2739



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 61   ggttgcaaaacttcctcggtatttt 85
            ||||||||||||||||| |||||||
Sbjct: 3037 ggttgcaaaacttcctcagtatttt 3013

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 61       ggttgcaaaacttcctcggtatttt 85
                ||||||||||||||||| |||||||
Sbjct: 27203334 ggttgcaaaacttcctcagtatttt 27203358

>dbj|AP003914.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1521_G02
          Length = 117964

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 61     ggttgcaaaacttcctcggtatttt 85
              ||||||||||||||||| |||||||
Sbjct: 104367 ggttgcaaaacttcctcagtatttt 104391

>dbj|AP004632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0623F08
          Length = 154540

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 61    ggttgcaaaacttcctcggtatttt 85
             ||||||||||||||||| |||||||
Sbjct: 26537 ggttgcaaaacttcctcagtatttt 26561

>gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence
          Length = 2205233

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 120     caaaataaggtaaagagcag 139
               ||||||||||||||||||||
Sbjct: 1716183 caaaataaggtaaagagcag 1716202

>gb|AC091527.21| Trypanosoma brucei chromosome 7 clone RPCI93-33N13, complete sequence
          Length = 114057

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 120   caaaataaggtaaagagcag 139
             ||||||||||||||||||||
Sbjct: 37240 caaaataaggtaaagagcag 37259

>gb|AC159439.1| Trypanosoma brucei chromosome 7 clone RPCI93-2F2, complete sequence
          Length = 134290

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 120    caaaataaggtaaagagcag 139
              ||||||||||||||||||||
Sbjct: 132487 caaaataaggtaaagagcag 132506

>gb|AC116812.10| Mus musculus chromosome 15, clone RP24-357G13, complete sequence
          Length = 183993

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 150   aggcactgttataaaagcaa 169
             ||||||||||||||||||||
Sbjct: 71254 aggcactgttataaaagcaa 71273

>gb|AC137556.3| Mus musculus BAC clone RP24-325M3 from chromosome 9, complete sequence
          Length = 170884

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 12     taagccacaggcattcaaca 31
              ||||||||||||||||||||
Sbjct: 167255 taagccacaggcattcaaca 167274

>gb|AC125401.4| Mus musculus BAC clone RP24-538H16 from chromosome 6, complete sequence
          Length = 130679

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 204    tcttcagccatttgaaacca 223
              ||||||||||||||||||||
Sbjct: 116208 tcttcagccatttgaaacca 116227

>gb|AE014819.1| Plasmodium falciparum 3D7 chromosome 14 section 4 of 13 of the complete
              sequence
          Length = 251448

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 172    gtgcacaaattttgaataat 191
              ||||||||||||||||||||
Sbjct: 227852 gtgcacaaattttgaataat 227833

>emb|AL162402.19| Human DNA sequence from clone RP5-1054K23 on chromosome 1p13.3-21.1,
             complete sequence
          Length = 80743

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    aagccacaggcattcaacac 32
             ||||||||||||||||||||
Sbjct: 35648 aagccacaggcattcaacac 35629

>emb|AL161902.12| Human DNA sequence from clone RP11-66B8 on chromosome 13 Contains part
             of the NBEA gene for neurobeachin (BCL8B FLJ10197
             KIAA1544) and a novel gene, complete sequence
          Length = 105537

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    aagccacaggcattcaacac 32
             ||||||||||||||||||||
Sbjct: 18278 aagccacaggcattcaacac 18259

>emb|AL158140.9| Human DNA sequence from clone RP11-217H19 on chromosome Xq13.3-21.2
             Contains the 3' end of a novel pseudogene, complete
             sequence
          Length = 94862

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    aagccacaggcattcaacac 32
             ||||||||||||||||||||
Sbjct: 45483 aagccacaggcattcaacac 45502

>gb|AC092904.7| Homo sapiens 3 BAC RP11-675I21 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 129641

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 13     aagccacaggcattcaacac 32
              ||||||||||||||||||||
Sbjct: 112829 aagccacaggcattcaacac 112810

>gb|AC104416.7| Homo sapiens chromosome 8, clone CTD-3015P10, complete sequence
          Length = 172029

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 221   ccaaaactcagccaacttgacatg 244
             ||||||||||| ||||||||||||
Sbjct: 34475 ccaaaactcagtcaacttgacatg 34452

>ref|XM_695069.1| PREDICTED: Danio rerio similar to cyclin fold protein 1
           (LOC571475), partial mRNA
          Length = 438

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 401 ccaactcgttcatgtcttcc 420
           ||||||||||||||||||||
Sbjct: 286 ccaactcgttcatgtcttcc 267

>gb|AC010374.6| Homo sapiens chromosome 5 clone CTD-2057J6, complete sequence
          Length = 117372

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 228   tcagccaacttgacatgatt 247
             ||||||||||||||||||||
Sbjct: 86544 tcagccaacttgacatgatt 86525

>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
          Length = 5751492

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 213     atttgaaaccaaaactcagccaacttga 240
               |||||||||||||| |||||||| ||||
Sbjct: 1851725 atttgaaaccaaaagtcagccaatttga 1851698

>gb|AC027126.4|AC027126 Homo sapiens chromosome 3 clone RP11-586C12 map 3p, complete sequence
          Length = 185608

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 213   atttgaaaccaaaactcagc 232
             ||||||||||||||||||||
Sbjct: 64354 atttgaaaccaaaactcagc 64373

>gb|AC108016.5| Homo sapiens BAC clone RP13-1015A13 from 4, complete sequence
          Length = 162715

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 198   agcagatcttcagccatttgaaac 221
             ||||||||||||| ||||||||||
Sbjct: 65361 agcagatcttcaggcatttgaaac 65338

>gb|AC092608.2| Homo sapiens BAC clone RP11-154F14 from 4, complete sequence
          Length = 196952

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 177    caaattttgaataatgaatt 196
              ||||||||||||||||||||
Sbjct: 131376 caaattttgaataatgaatt 131357

>gb|AC104790.4| Homo sapiens BAC clone RP11-167A8 from 4, complete sequence
          Length = 123589

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 13     aagccacaggcattcaacac 32
              ||||||||||||||||||||
Sbjct: 108675 aagccacaggcattcaacac 108694

>gb|AC159138.6| Mus musculus  BAC RP23-315F23 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 180124

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 204   tcttcagccatttgaaacca 223
             ||||||||||||||||||||
Sbjct: 63937 tcttcagccatttgaaacca 63956

>gb|AC157998.2| Mus musculus BAC clone RP23-27L18 from chromosome 9, complete sequence
          Length = 253762

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 12     taagccacaggcattcaaca 31
              ||||||||||||||||||||
Sbjct: 156188 taagccacaggcattcaaca 156169

>gb|AC017014.4| Homo sapiens BAC clone RP11-142D10 from 2, complete sequence
          Length = 182366

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    tcctcggtatttttctgatt 92
             ||||||||||||||||||||
Sbjct: 43841 tcctcggtatttttctgatt 43822

>gb|AC010281.4|AC010281 Homo sapiens chromosome 5 clone CTC-553B9, complete sequence
          Length = 160378

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 408    gttcatgtcttcccccattg 427
              ||||||||||||||||||||
Sbjct: 143912 gttcatgtcttcccccattg 143893

>dbj|BS000175.1| Pan troglodytes chromosome 22 clone:PTB-091H17, map 22, complete
             sequences
          Length = 183155

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    aagccacaggcattcaacac 32
             ||||||||||||||||||||
Sbjct: 26169 aagccacaggcattcaacac 26188

>dbj|BS000174.1| Pan troglodytes chromosome 22 clone:PTB-137B16, map 22, complete
              sequences
          Length = 193756

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 13     aagccacaggcattcaacac 32
              ||||||||||||||||||||
Sbjct: 183966 aagccacaggcattcaacac 183985

>emb|AL118559.6|CNS01DRU Human chromosome 14 DNA sequence BAC R-618B21 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 206722

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    aagccacaggcattcaacac 32
             ||||||||||||||||||||
Sbjct: 98364 aagccacaggcattcaacac 98383

>emb|AL929039.7| Zebrafish DNA sequence from clone DKEY-245I6, complete sequence
          Length = 162385

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 181    ttttgaataatgaattcagc 200
              ||||||||||||||||||||
Sbjct: 129191 ttttgaataatgaattcagc 129210

>gb|AC090947.2| Homo sapiens chromosome 3 clone RP11-30G23 map 3p, complete sequence
          Length = 166049

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 213   atttgaaaccaaaactcagc 232
             ||||||||||||||||||||
Sbjct: 20096 atttgaaaccaaaactcagc 20115

>gb|AC018500.4| Homo sapiens chromosome 3 clone RP11-275J11 map 3p, complete sequence
          Length = 150810

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 213   atttgaaaccaaaactcagc 232
             ||||||||||||||||||||
Sbjct: 18454 atttgaaaccaaaactcagc 18435


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,989,593
Number of Sequences: 3902068
Number of extensions: 3989593
Number of successful extensions: 76282
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76176
Number of HSP's gapped (non-prelim): 106
length of query: 432
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 410
effective length of database: 17,147,199,772
effective search space: 7030351906520
effective search space used: 7030351906520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)