ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl40e07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC114547.12| Mus musculus chromosome 8, clone RP24-68M15, com... 42 0.60
2gb|AY392536.1| Porcine teschovirus isolate RD 181/01 polyprotein... 40 2.4
3gb|AC004899.1| Homo sapiens PAC clone RP4-815D20 from 7, complet... 40 2.4
4gb|AC129623.4| Homo sapiens 12 BAC CTD-2107C6 (Cal Tech Human BA... 40 2.4
5emb|BX013175.1|CNS08IBV Single read from an extremity of a full-... 40 2.4
6emb|CR861203.1| Pongo pygmaeus mRNA; cDNA DKFZp459F033 (from clo... 40 2.4
7emb|BX511190.8| Zebrafish DNA sequence from clone RP71-80D18 in ... 40 2.4
8gb|AC103873.2| Homo sapiens chromosome 11, clone RP11-768H8, com... 40 2.4
9gb|AC025726.2| Caenorhabditis elegans cosmid Y71G12B, complete s... 40 2.4
10gb|AC074237.4| Homo sapiens chromosome 18, clone RP11-333K18, co... 40 2.4
11gb|AC148317.3| Pan troglodytes BAC clone CH251-519K22 from chrom... 40 2.4
12ref|NM_001037190.1| Rattus norvegicus similar to glyceraldehyde-... 40 2.4
13gb|AC161887.5| Mus musculus 6 BAC RP23-75P5 (Roswell Park Cancer... 40 2.4
14gb|AC159004.5| Mus musculus BAC clone RP23-168H21 from chromosom... 40 2.4
15gb|AC129933.13| Mus musculus chromosome 1, clone RP23-234P14, co... 40 2.4
16ref|NM_058487.2| Caenorhabditis elegans Y71G12B.24 (Y71G12B.24) ... 40 2.4
17gb|AC158685.4| Mus musculus 6 BAC RP23-284D11 (Roswell Park Canc... 40 2.4
18gb|AF296093.1| Porcine teschovirus 8 strain UKG 173/74 polyprote... 40 2.4
19emb|CT025674.13| Mouse DNA sequence from clone RP24-364I17 on ch... 40 2.4
20gb|BC100150.1| Rattus norvegicus similar to glyceraldehyde-3-pho... 40 2.4
21gb|AC170999.2| Mus musculus BAC clone RP23-443L17 from chromosom... 40 2.4
22emb|AL732478.7| Mouse DNA sequence from clone RP23-42N14 on chro... 40 2.4
23ref|NM_113686.3| Arabidopsis thaliana RNA binding / nucleic acid... 38 9.3
24ref|NM_180677.1| Arabidopsis thaliana RNA binding / nucleic acid... 38 9.3
25gb|AC161045.2| Mus musculus BAC clone RP24-326E14 from chromosom... 38 9.3
26gb|AY605481.1| Bipes biporus voucher MVZ 236258 mitochondrion, c... 38 9.3
27gb|DQ443386.1| Bombyx mori peptidylprolyl isomerase B mRNA, comp... 38 9.3
28gb|DQ481666.1| Takifugu rubripes HoxBb gene cluster, complete se... 38 9.3
29ref|NG_001333.1| Homo sapiens T cell receptor beta locus (TRB@) ... 38 9.3
30gb|AC122418.4| Mus musculus BAC clone RP24-159E6 from chromosome... 38 9.3
31gb|AC123532.4| Mus musculus chromosome 14 clone RP23-84B6, compl... 38 9.3
32gb|AC098877.3| Mus musculus BAC clone RP23-2C24 from 14, complet... 38 9.3
33gb|BC048990.1| Homo sapiens Ran GTPase activating protein 1, mRN... 38 9.3
34gb|BC041396.2| Homo sapiens Ran GTPase activating protein 1, mRN... 38 9.3
35gb|AC161448.4| Mus musculus BAC clone RP24-149K9 from chromosome... 38 9.3
36gb|AC128638.34| Medicago truncatula clone mth2-36h10, complete s... 38 9.3
37emb|AL355794.5| Human DNA sequence from clone RP4-781D12 on chro... 38 9.3
38gb|BT000780.1| Arabidopsis thaliana clone RAFL07-09-E19 (R10671)... 38 9.3
39emb|AL035681.13|HS756G23 Human DNA sequence from clone RP4-756G2... 38 9.3
40emb|AL031659.9|HS343K2 Human DNA sequence from clone RP3-343K2 o... 38 9.3
41emb|BX013174.1|CNS08IBU Single read from an extremity of a full-... 38 9.3
42gb|AC158132.6| Mus musculus chromosome 1, clone RP23-11K8, compl... 38 9.3
43gb|BC014044.2| Homo sapiens Ran GTPase activating protein 1, mRN... 38 9.3
44emb|CR615880.1| full-length cDNA clone CS0DI067YN02 of Placenta ... 38 9.3
45gb|AC010715.6| Drosophila melanogaster 3L BAC RP98-9G21 (Roswell... 38 9.3
46emb|CR599804.1| full-length cDNA clone CS0CAP007YA07 of Thymus o... 38 9.3
47emb|CR597202.1| full-length cDNA clone CS0DI083YJ18 of Placenta ... 38 9.3
48emb|CR595421.1| full-length cDNA clone CS0CAP005YD21 of Thymus o... 38 9.3
49gb|AC108164.5| Homo sapiens BAC clone RP11-714F4 from 4, complet... 38 9.3
50emb|BX914203.24| Zebrafish DNA sequence from clone CH211-22E19 i... 38 9.3
51gb|AC090127.11| Mus musculus chromosome 6, clone RP23-128D23, co... 38 9.3
52gb|AC021106.6| Homo sapiens BAC clone RP11-177C12 from 4, comple... 38 9.3
53gb|BC019676.1|BC019676 Homo sapiens, Similar to RAN GTPase activ... 38 9.3
54gb|AY062574.1| Arabidopsis thaliana Unknown protein (At3g27710; ... 38 9.3
55ref|NM_002883.2| Homo sapiens Ran GTPase activating protein 1 (R... 38 9.3
56dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticu... 38 9.3
57gb|AC026403.4| Homo sapiens chromosome 5 clone CTB-63M22, comple... 38 9.3
58gb|BC004990.1|BC004990 Homo sapiens, clone IMAGE:2905857, mRNA, ... 38 9.3
59gb|AC005815.1| Homo sapiens chromosome 22 clone 239d10 map 22q11... 38 9.3
60gb|AC114980.2| Homo sapiens chromosome 5 clone RP11-549J18, comp... 38 9.3
61gb|AC016776.6| Homo sapiens BAC clone RP11-574K22 from 2, comple... 38 9.3
62gb|AC098828.3| Homo sapiens BAC clone RP11-644K8 from 2, complet... 38 9.3
63gb|AC153598.4| Mus musculus 6 BAC RP23-167L15 (Roswell Park Canc... 38 9.3
64gb|AC154584.3| Mus musculus BAC clone RP23-248M3 from chromosome... 38 9.3
65gb|AC009230.3| Homo sapiens BAC clone RP11-343B21 from 2, comple... 38 9.3
66dbj|AB018114.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 38 9.3
67ref|XM_308440.2| Anopheles gambiae str. PEST ENSANGP00000018327 ... 38 9.3
68gb|AC122122.14| Mus musculus chromosome 1, clone RP23-15D21, com... 38 9.3
69emb|CR388087.28| Zebrafish DNA sequence from clone DKEY-19N7 in ... 38 9.3
70gb|AE003563.4| Drosophila melanogaster chromosome 3L, section 22... 38 9.3
71gb|AC099692.4| Mus musculus chromosome 13, clone RP23-198N22, co... 38 9.3
72emb|AL773557.21| Mouse DNA sequence from clone RP23-391F9 on chr... 38 9.3
73gb|AC004767.1|AC004767 Drosophila melanogaster DNA sequence (P1s... 38 9.3
74emb|CT010486.13| Mouse DNA sequence from clone RP23-129J22 on ch... 38 9.3
75gb|AC153595.27| Mus musculus 6 BAC RP23-140J24 (Roswell Park Can... 38 9.3
76gb|U66059.1| Human germline T-cell receptor beta chain Dopamine-... 38 9.3
77emb|AL844140.7| Mouse DNA sequence from clone RP23-428B12 on chr... 38 9.3
78emb|AL596108.13| Mouse DNA sequence from clone RP23-326K2 on chr... 38 9.3
79emb|AL928658.6| Mouse DNA sequence from clone RP23-238A18 on chr... 38 9.3
80emb|AL929054.5| Mouse DNA sequence from clone RP23-454A14 on chr... 38 9.3
81dbj|AB058738.1| Homo sapiens mRNA for KIAA1835 protein, partial cds 38 9.3
82emb|AL627342.15| Mouse DNA sequence from clone RP23-281G20 on ch... 38 9.3 
>gb|AC114547.12| Mus musculus chromosome 8, clone RP24-68M15, complete sequence
          Length = 182611

 Score = 42.1 bits (21), Expect = 0.60
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 103    gcacacccacacacatactcg 123
              |||||||||||||||||||||
Sbjct: 146868 gcacacccacacacatactcg 146848
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>gb|AY392536.1| Porcine teschovirus isolate RD 181/01 polyprotein gene, partial cds
          Length = 3284

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 126 aaccgagcaatcaaatttctgtgt 149
           |||| |||||||||||||||||||
Sbjct: 46  aaccaagcaatcaaatttctgtgt 23
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>gb|AC004899.1| Homo sapiens PAC clone RP4-815D20 from 7, complete sequence
          Length = 91125

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 101  aagcacacccacacacatac 120
            ||||||||||||||||||||
Sbjct: 4573 aagcacacccacacacatac 4554
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>gb|AC129623.4| Homo sapiens 12 BAC CTD-2107C6 (Cal Tech Human BAC Library D) complete
             sequence
          Length = 133581

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    tgtctcaaaggtcacaaact 95
             ||||||||||||||||||||
Sbjct: 90565 tgtctcaaaggtcacaaact 90546
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>emb|BX013175.1|CNS08IBV Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA2DD10 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 1027

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 101 aagcacacccacacacatactcgt 124
           |||||||| |||||||||||||||
Sbjct: 231 aagcacacacacacacatactcgt 208
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>emb|CR861203.1| Pongo pygmaeus mRNA; cDNA DKFZp459F033 (from clone DKFZp459F033)
          Length = 3066

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 104  cacacccacacacatactcg 123
            ||||||||||||||||||||
Sbjct: 2216 cacacccacacacatactcg 2197
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>emb|BX511190.8| Zebrafish DNA sequence from clone RP71-80D18 in linkage group 5, complete
              sequence
          Length = 156408

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 104    cacacccacacacatactcgtcaa 127
              |||||||||||||| |||||||||
Sbjct: 139838 cacacccacacacacactcgtcaa 139861
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>gb|AC103873.2| Homo sapiens chromosome 11, clone RP11-768H8, complete sequence
          Length = 184860

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 103    gcacacccacacacatactcgtca 126
              |||||||||||||||||| |||||
Sbjct: 154789 gcacacccacacacatacacgtca 154812
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>gb|AC025726.2| Caenorhabditis elegans cosmid Y71G12B, complete sequence
          Length = 191954

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 142    ttctgtgtacattcgggcctacat 165
              |||||||||||||||||| |||||
Sbjct: 102373 ttctgtgtacattcgggcgtacat 102396
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>gb|AC074237.4| Homo sapiens chromosome 18, clone RP11-333K18, complete sequence
          Length = 181390

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    tgtctcaaaggtcacaaact 95
             ||||||||||||||||||||
Sbjct: 64871 tgtctcaaaggtcacaaact 64852
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>gb|AC148317.3| Pan troglodytes BAC clone CH251-519K22 from chromosome 7, complete
             sequence
          Length = 154065

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   aagcacacccacacacatac 120
             ||||||||||||||||||||
Sbjct: 72840 aagcacacccacacacatac 72821
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>ref|NM_001037190.1| Rattus norvegicus similar to glyceraldehyde-3-phosphate dehydrogenase
            (LOC303448), mRNA
          Length = 3174

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 101  aagcacacccacacacatac 120
            ||||||||||||||||||||
Sbjct: 2331 aagcacacccacacacatac 2350
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>gb|AC161887.5| Mus musculus 6 BAC RP23-75P5 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 227751

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   agcaatcaaatttctgtgta 150
             ||||||||||||||||||||
Sbjct: 43592 agcaatcaaatttctgtgta 43611
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>gb|AC159004.5| Mus musculus BAC clone RP23-168H21 from chromosome 15, complete
             sequence
          Length = 217298

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 100   taagcacacccacacacata 119
             ||||||||||||||||||||
Sbjct: 77430 taagcacacccacacacata 77411
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>gb|AC129933.13| Mus musculus chromosome 1, clone RP23-234P14, complete sequence
          Length = 247595

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 82    aaaggtcacaaactaatgta 101
             ||||||||||||||||||||
Sbjct: 53784 aaaggtcacaaactaatgta 53765
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>ref|NM_058487.2| Caenorhabditis elegans Y71G12B.24 (Y71G12B.24) mRNA, complete cds
          Length = 1661

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 142  ttctgtgtacattcgggcctacat 165
            |||||||||||||||||| |||||
Sbjct: 1080 ttctgtgtacattcgggcgtacat 1057
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>gb|AC158685.4| Mus musculus 6 BAC RP23-284D11 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 191856

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 131    agcaatcaaatttctgtgta 150
              ||||||||||||||||||||
Sbjct: 111856 agcaatcaaatttctgtgta 111875
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>gb|AF296093.1| Porcine teschovirus 8 strain UKG 173/74 polyprotein gene, complete
           cds
          Length = 7017

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 126 aaccgagcaatcaaatttctgtgt 149
           |||| |||||||||||||||||||
Sbjct: 53  aaccaagcaatcaaatttctgtgt 30
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>emb|CT025674.13| Mouse DNA sequence from clone RP24-364I17 on chromosome 13, complete
             sequence
          Length = 117646

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   gcacacccacacacatactc 122
             ||||||||||||||||||||
Sbjct: 18177 gcacacccacacacatactc 18158
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>gb|BC100150.1| Rattus norvegicus similar to glyceraldehyde-3-phosphate
            dehydrogenase, mRNA (cDNA clone MGC:114475
            IMAGE:7455257), complete cds
          Length = 3174

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 101  aagcacacccacacacatac 120
            ||||||||||||||||||||
Sbjct: 2331 aagcacacccacacacatac 2350
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>gb|AC170999.2| Mus musculus BAC clone RP23-443L17 from chromosome 14, complete
            sequence
          Length = 196017

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 98   tgtaagcacacccacacaca 117
            ||||||||||||||||||||
Sbjct: 5614 tgtaagcacacccacacaca 5595
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>emb|AL732478.7| Mouse DNA sequence from clone RP23-42N14 on chromosome 2, complete
             sequence
          Length = 203434

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 130   gagcaatcaaatttctgtgtacat 153
             |||||||| |||||||||||||||
Sbjct: 19584 gagcaatctaatttctgtgtacat 19607
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>ref|NM_113686.3| Arabidopsis thaliana RNA binding / nucleic acid binding AT3G27700
            transcript variant AT3G27700.2 mRNA, complete cds
          Length = 3526

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 51   aggattcatgaaactggca 69
            |||||||||||||||||||
Sbjct: 1214 aggattcatgaaactggca 1196
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>ref|NM_180677.1| Arabidopsis thaliana RNA binding / nucleic acid binding AT3G27700
            transcript variant AT3G27700.1 mRNA, complete cds
          Length = 3689

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 51   aggattcatgaaactggca 69
            |||||||||||||||||||
Sbjct: 1214 aggattcatgaaactggca 1196
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>gb|AC161045.2| Mus musculus BAC clone RP24-326E14 from chromosome 13, complete
             sequence
          Length = 150469

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 102   agcacacccacacacatac 120
             |||||||||||||||||||
Sbjct: 74301 agcacacccacacacatac 74319
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>gb|AY605481.1| Bipes biporus voucher MVZ 236258 mitochondrion, complete genome
          Length = 16430

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 14    cgtaagcaatttaaacatc 32
             |||||||||||||||||||
Sbjct: 10087 cgtaagcaatttaaacatc 10105
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>gb|DQ443386.1| Bombyx mori peptidylprolyl isomerase B mRNA, complete cds
          Length = 1152

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 126 aaccgagcaatcaaatttc 144
           |||||||||||||||||||
Sbjct: 105 aaccgagcaatcaaatttc 87
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>gb|DQ481666.1| Takifugu rubripes HoxBb gene cluster, complete sequence
          Length = 130146

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 73    ttttgtctcaaaggtcaca 91
             |||||||||||||||||||
Sbjct: 96357 ttttgtctcaaaggtcaca 96375
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>ref|NG_001333.1| Homo sapiens T cell receptor beta locus (TRB@) on chromosome 7
          Length = 684973

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 164    atatgctactggtgttgta 182
              |||||||||||||||||||
Sbjct: 227981 atatgctactggtgttgta 227963
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>gb|AC122418.4| Mus musculus BAC clone RP24-159E6 from chromosome 13, complete sequence
          Length = 221980

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 104   cacacccacacacatactc 122
             |||||||||||||||||||
Sbjct: 47588 cacacccacacacatactc 47570
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>gb|AC123532.4| Mus musculus chromosome 14 clone RP23-84B6, complete sequence
          Length = 166421

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 104   cacacccacacacatactc 122
             |||||||||||||||||||
Sbjct: 64775 cacacccacacacatactc 64757
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>gb|AC098877.3| Mus musculus BAC clone RP23-2C24 from 14, complete sequence
          Length = 240151

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 104   cacacccacacacatactc 122
             |||||||||||||||||||
Sbjct: 94899 cacacccacacacatactc 94881
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>gb|BC048990.1| Homo sapiens Ran GTPase activating protein 1, mRNA (cDNA clone
            IMAGE:5271569), partial cds
          Length = 3484

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 104  cacacccacacacatactc 122
            |||||||||||||||||||
Sbjct: 2643 cacacccacacacatactc 2625
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>gb|BC041396.2| Homo sapiens Ran GTPase activating protein 1, mRNA (cDNA clone
            MGC:43988 IMAGE:5277434), complete cds
          Length = 3562

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 104  cacacccacacacatactc 122
            |||||||||||||||||||
Sbjct: 2705 cacacccacacacatactc 2687
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>gb|AC161448.4| Mus musculus BAC clone RP24-149K9 from chromosome 6, complete sequence
          Length = 190414

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 100   taagcacacccacacacatactc 122
             ||||||||| |||||||||||||
Sbjct: 47004 taagcacacacacacacatactc 47026
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>gb|AC128638.34| Medicago truncatula clone mth2-36h10, complete sequence
          Length = 110895

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 135   atcaaatttctgtgtacat 153
             |||||||||||||||||||
Sbjct: 38980 atcaaatttctgtgtacat 38962
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>emb|AL355794.5| Human DNA sequence from clone RP4-781D12 on chromosome 1 Contains the
             5' end of a nucleosome assembly protein 1-like 4 (NAP1L4)
             pseudogene, the 5' end of the CD58  gene for CD58 antigen,
             (lymphocyte function-associated antigen 3), the 3' end of
             the IGSF3 gene for immunoglobulin superfamily member 3 and
             a CpG island, complete sequence
          Length = 88484

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 72    gttttgtctcaaaggtcacaaac 94
             ||||| |||||||||||||||||
Sbjct: 21089 gttttttctcaaaggtcacaaac 21111
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>gb|BT000780.1| Arabidopsis thaliana clone RAFL07-09-E19 (R10671) unknown protein
            (At3g27700) mRNA, complete cds
          Length = 3332

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 51   aggattcatgaaactggca 69
            |||||||||||||||||||
Sbjct: 1214 aggattcatgaaactggca 1196
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>emb|AL035681.13|HS756G23 Human DNA sequence from clone RP4-756G23 on chromosome 22q13.31-13.33,
             complete sequence
          Length = 89948

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 104   cacacccacacacatactc 122
             |||||||||||||||||||
Sbjct: 39863 cacacccacacacatactc 39881
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>emb|AL031659.9|HS343K2 Human DNA sequence from clone RP3-343K2 on chromosome 20q11.22-12
            Contains the 3' end of the GHRH gene for growth hormone
            releasing hormone, the RPN2 gene for ribophorin II, the
            5' end of the C20orf132 gene, a ribososmal protein L13
            (RPL13) pseudogene and a CpG island, complete sequence
          Length = 100998

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 70   acgttttgtctcaaaggtc 88
            |||||||||||||||||||
Sbjct: 3420 acgttttgtctcaaaggtc 3438
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>emb|BX013174.1|CNS08IBU Single read from an extremity of a full-length cDNA clone made from
            Anopheles gambiae total adult females. 5-PRIME end of
            clone FK0AAA2DD10 of strain 6-9 of Anopheles gambiae
            (African malaria mosquito)
          Length = 1073

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 101  aagcacacccacacacatactcg 123
            |||||||| ||||||||||||||
Sbjct: 1029 aagcacacacacacacatactcg 1051
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>gb|AC158132.6| Mus musculus chromosome 1, clone RP23-11K8, complete sequence
          Length = 231218

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 91     aaactaatgtaagcacacccacacaca 117
              ||||| |||||||||||| ||||||||
Sbjct: 126733 aaactcatgtaagcacacacacacaca 126707
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>gb|BC014044.2| Homo sapiens Ran GTPase activating protein 1, mRNA (cDNA clone
            MGC:20266 IMAGE:3506039), complete cds
          Length = 2994

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 104  cacacccacacacatactc 122
            |||||||||||||||||||
Sbjct: 2149 cacacccacacacatactc 2131
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>emb|CR615880.1| full-length cDNA clone CS0DI067YN02 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1474

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 104 cacacccacacacatactc 122
           |||||||||||||||||||
Sbjct: 677 cacacccacacacatactc 659
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>gb|AC010715.6| Drosophila melanogaster 3L BAC RP98-9G21 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 174551

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 105   acacccacacacatactcg 123
             |||||||||||||||||||
Sbjct: 87593 acacccacacacatactcg 87575
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>emb|CR599804.1| full-length cDNA clone CS0CAP007YA07 of Thymus of Homo sapiens
           (human)
          Length = 1477

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 104 cacacccacacacatactc 122
           |||||||||||||||||||
Sbjct: 695 cacacccacacacatactc 677
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>emb|CR597202.1| full-length cDNA clone CS0DI083YJ18 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 882

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 104 cacacccacacacatactc 122
           |||||||||||||||||||
Sbjct: 56  cacacccacacacatactc 38
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>emb|CR595421.1| full-length cDNA clone CS0CAP005YD21 of Thymus of Homo sapiens
           (human)
          Length = 1597

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 104 cacacccacacacatactc 122
           |||||||||||||||||||
Sbjct: 802 cacacccacacacatactc 784
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>gb|AC108164.5| Homo sapiens BAC clone RP11-714F4 from 4, complete sequence
          Length = 111729

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 125    caaccgagcaatcaaatttctgtgtac 151
              |||| ||||||| ||||||||||||||
Sbjct: 100157 caacagagcaataaaatttctgtgtac 100183
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>emb|BX914203.24| Zebrafish DNA sequence from clone CH211-22E19 in linkage group 11,
             complete sequence
          Length = 179563

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 102   agcacacccacacacatac 120
             |||||||||||||||||||
Sbjct: 52163 agcacacccacacacatac 52181
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>gb|AC090127.11| Mus musculus chromosome 6, clone RP23-128D23, complete sequence
          Length = 212404

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 100   taagcacacccacacacatactc 122
             ||||||||| |||||||||||||
Sbjct: 56628 taagcacacacacacacatactc 56606
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>gb|AC021106.6| Homo sapiens BAC clone RP11-177C12 from 4, complete sequence
          Length = 195108

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 104  cacacccacacacatactc 122
            |||||||||||||||||||
Sbjct: 8086 cacacccacacacatactc 8068
to top
>gb|BC019676.1|BC019676 Homo sapiens, Similar to RAN GTPase activating protein 1, clone
           IMAGE:4516363, mRNA, partial cds
          Length = 1202

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 104 cacacccacacacatactc 122
           |||||||||||||||||||
Sbjct: 350 cacacccacacacatactc 332
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>gb|AY062574.1| Arabidopsis thaliana Unknown protein (At3g27710; MGF10.11) mRNA,
            complete cds
          Length = 3660

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 51   aggattcatgaaactggca 69
            |||||||||||||||||||
Sbjct: 1184 aggattcatgaaactggca 1166
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>ref|NM_002883.2| Homo sapiens Ran GTPase activating protein 1 (RANGAP1), mRNA
          Length = 3040

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 104  cacacccacacacatactc 122
            |||||||||||||||||||
Sbjct: 2195 cacacccacacacatactc 2177
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>dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 DNA, complete
               genome
          Length = 2516575

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 7       gaaactgcgtaagcaattt 25
               |||||||||||||||||||
Sbjct: 1734094 gaaactgcgtaagcaattt 1734112
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>gb|AC026403.4| Homo sapiens chromosome 5 clone CTB-63M22, complete sequence
          Length = 138536

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 103   gcacacccacacacatact 121
             |||||||||||||||||||
Sbjct: 61487 gcacacccacacacatact 61469
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>gb|BC004990.1|BC004990 Homo sapiens, clone IMAGE:2905857, mRNA, partial cds
          Length = 1672

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 104 cacacccacacacatactc 122
           |||||||||||||||||||
Sbjct: 809 cacacccacacacatactc 791
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>gb|AC005815.1| Homo sapiens chromosome 22 clone 239d10 map 22q11, complete sequence
          Length = 183085

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 72    gttttgtctcaaaggtcacaaac 94
             ||||| |||||||||||||||||
Sbjct: 23412 gttttttctcaaaggtcacaaac 23434
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>gb|AC114980.2| Homo sapiens chromosome 5 clone RP11-549J18, complete sequence
          Length = 181927

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 16    taagcaatttaaacatcaa 34
             |||||||||||||||||||
Sbjct: 94347 taagcaatttaaacatcaa 94329
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>gb|AC016776.6| Homo sapiens BAC clone RP11-574K22 from 2, complete sequence
          Length = 197425

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 101    aagcacacccacacacata 119
              |||||||||||||||||||
Sbjct: 115375 aagcacacccacacacata 115357
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>gb|AC098828.3| Homo sapiens BAC clone RP11-644K8 from 2, complete sequence
          Length = 127408

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 95     taatgtaagcacacccacacaca 117
              |||||||||||||| ||||||||
Sbjct: 108542 taatgtaagcacacacacacaca 108520
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>gb|AC153598.4| Mus musculus 6 BAC RP23-167L15 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 209035

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 95    taatgtaagcacacccacacaca 117
             |||||||||||||| ||||||||
Sbjct: 18665 taatgtaagcacacacacacaca 18643
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>gb|AC154584.3| Mus musculus BAC clone RP23-248M3 from chromosome 13, complete sequence
          Length = 166580

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 16    taagcaatttaaacatcaa 34
             |||||||||||||||||||
Sbjct: 92404 taagcaatttaaacatcaa 92422
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>gb|AC009230.3| Homo sapiens BAC clone RP11-343B21 from 2, complete sequence
          Length = 173993

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 104    cacacccacacacatactc 122
              |||||||||||||||||||
Sbjct: 118742 cacacccacacacatactc 118724
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>dbj|AB018114.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MGF10
          Length = 84702

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 51    aggattcatgaaactggca 69
             |||||||||||||||||||
Sbjct: 34958 aggattcatgaaactggca 34976
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>ref|XM_308440.2| Anopheles gambiae str. PEST ENSANGP00000018327 (ENSANGG00000015838),
            mRNA
          Length = 1067

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 101  aagcacacccacacacatactcg 123
            |||||||| ||||||||||||||
Sbjct: 1023 aagcacacacacacacatactcg 1045
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>gb|AC122122.14| Mus musculus chromosome 1, clone RP23-15D21, complete sequence
          Length = 204416

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 104    cacacccacacacatactc 122
              |||||||||||||||||||
Sbjct: 108935 cacacccacacacatactc 108953
to top
>emb|CR388087.28| Zebrafish DNA sequence from clone DKEY-19N7 in linkage group 22,
             complete sequence
          Length = 210107

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 104   cacacccacacacatactc 122
             |||||||||||||||||||
Sbjct: 46755 cacacccacacacatactc 46773
to top
>gb|AE003563.4| Drosophila melanogaster chromosome 3L, section 22 of 83 of the complete
             sequence
          Length = 264966

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 105   acacccacacacatactcg 123
             |||||||||||||||||||
Sbjct: 36173 acacccacacacatactcg 36155
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>gb|AC099692.4| Mus musculus chromosome 13, clone RP23-198N22, complete sequence
          Length = 216362

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 104    cacacccacacacatactc 122
              |||||||||||||||||||
Sbjct: 108483 cacacccacacacatactc 108465
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>emb|AL773557.21| Mouse DNA sequence from clone RP23-391F9 on chromosome 2, complete
              sequence
          Length = 215139

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 104    cacacccacacacatactc 122
              |||||||||||||||||||
Sbjct: 129817 cacacccacacacatactc 129835
to top
>gb|AC004767.1|AC004767 Drosophila melanogaster DNA sequence (P1s DS01986 (D261), DS01814 (D252),
              and DS08881 (D260)), complete sequence
          Length = 196672

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 105    acacccacacacatactcg 123
              |||||||||||||||||||
Sbjct: 152959 acacccacacacatactcg 152977
to top
>emb|CT010486.13| Mouse DNA sequence from clone RP23-129J22 on chromosome 13, complete
             sequence
          Length = 199574

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 102   agcacacccacacacatac 120
             |||||||||||||||||||
Sbjct: 74970 agcacacccacacacatac 74988
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>gb|AC153595.27| Mus musculus 6 BAC RP23-140J24 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 225736

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 95     taatgtaagcacacccacacaca 117
              |||||||||||||| ||||||||
Sbjct: 222412 taatgtaagcacacacacacaca 222390
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>gb|U66059.1| Human germline T-cell receptor beta chain Dopamine-beta-hydroxylase-like,
              TRY1, TRY2, TRY3, TCRBV27S1P, TCRBV22S1A2N1T, TCRBV9S1A1T,
              TCRBV7S1A1N2T, TCRBV5S1A1T, TCRBV13S3, TCRBV6S7P,
              TCRBV7S3A2T, TCRBV13S2A1T, TCRBV9S2A2PT, TCRBV7S2A1N4T,
              TCRBV13S9/13S2A1T, TCRBV6S5A1N1, TCRBV30S1P, TCRBV31S1,
              TCRBV13S5, TCRBV6S1A1N1, TCRBV32S1P, TCRBV5S5P,
              TCRBV1S1A1N1, TCRBV12S2A1T, TCRBV21S1, TCRBV8S4P,
              TCRBV12S3, TCRBV21S3A2N2T, TCRBV8S5P, TCRBV13S1 genes from
              bases 1 to 267156 (section 1 of 3)
          Length = 267156

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 164    atatgctactggtgttgta 182
              |||||||||||||||||||
Sbjct: 227981 atatgctactggtgttgta 227963
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>emb|AL844140.7| Mouse DNA sequence from clone RP23-428B12 on chromosome 4, complete
             sequence
          Length = 160681

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 104   cacacccacacacatactc 122
             |||||||||||||||||||
Sbjct: 62215 cacacccacacacatactc 62233
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>emb|AL596108.13| Mouse DNA sequence from clone RP23-326K2 on chromosome 11, complete
              sequence
          Length = 200966

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 104    cacacccacacacatactc 122
              |||||||||||||||||||
Sbjct: 192913 cacacccacacacatactc 192931
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>emb|AL928658.6| Mouse DNA sequence from clone RP23-238A18 on chromosome 2, complete
             sequence
          Length = 220679

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 96    aatgtaagcacacccacacacat 118
             ||||||||||||| |||||||||
Sbjct: 98056 aatgtaagcacacacacacacat 98078
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>emb|AL929054.5| Mouse DNA sequence from clone RP23-454A14 on chromosome 2, complete
              sequence
          Length = 198497

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 104    cacacccacacacatactc 122
              |||||||||||||||||||
Sbjct: 190497 cacacccacacacatactc 190515
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>dbj|AB058738.1| Homo sapiens mRNA for KIAA1835 protein, partial cds
          Length = 4240

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 104  cacacccacacacatactc 122
            |||||||||||||||||||
Sbjct: 3418 cacacccacacacatactc 3400
to top
>emb|AL627342.15| Mouse DNA sequence from clone RP23-281G20 on chromosome 4, complete
             sequence
          Length = 84122

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 104   cacacccacacacatactc 122
             |||||||||||||||||||
Sbjct: 34401 cacacccacacacatactc 34419


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,801,180
Number of Sequences: 3902068
Number of extensions: 1801180
Number of successful extensions: 213168
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 212865
Number of HSP's gapped (non-prelim): 303
length of query: 189
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 167
effective length of database: 17,147,199,772
effective search space: 2863582361924
effective search space used: 2863582361924
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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