ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl40e05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197154.1| Oryza sativa (japonica cultivar-group) putative... 52 0.001
2ref|NM_197176.1| Oryza sativa (japonica cultivar-group) putative... 52 0.001
3gb|AC068923.12| Oryza sativa chromosome 10 BAC OSJNBa0017E08 gen... 52 0.001
4gb|AC068950.11| Oryza sativa chromosome 10 BAC OSJNBa0041P03 gen... 52 0.001
5dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
6dbj|AB110443.1| Oryza sativa (indica cultivar-group) Rf-1 gene f... 52 0.001
7dbj|AK066573.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.001
8gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 52 0.001
9emb|CT573098.3| RP43-076G03, complete sequence 44 0.35
10emb|CT573270.1| RP43-049F09, complete sequence 44 0.35
11gb|AC120003.6| Mus musculus chromosome 8, clone RP24-148H22, com... 42 1.4
12gb|AC115484.2| Drosophila melanogaster clone BACR06K01, complete... 42 1.4
13gb|AC124918.5| Rattus norvegicus 4 BAC CH230-4H1 (Children's Hos... 42 1.4
14gb|AC108104.2| Homo sapiens chromosome 5 clone RP11-198P15, comp... 42 1.4
15ref|NM_080191.2| Drosophila melanogaster weckle CG4148-RA (wek),... 42 1.4
16gb|AY051673.1| Drosophila melanogaster LD22579 full length cDNA 42 1.4
17gb|AE003648.2| Drosophila melanogaster chromosome 2L, section 57... 42 1.4
18ref|NM_194339.1| Mus musculus BMS1-like, ribosome assembly prote... 40 5.5
19gb|BC030906.1| Mus musculus BMS1-like, ribosome assembly protein... 40 5.5
20gb|AC122847.4| Mus musculus BAC clone RP23-163F2 from 6, complet... 40 5.5
21gb|AY346378.1| Penaeus monodon crustacean hyperglycemic hormone ... 40 5.5
22gb|DQ452367.1| Liriomyza huidobrensis clone 3 heat shock protein... 40 5.5
23gb|DQ452366.1| Liriomyza huidobrensis clone 2 heat shock protein... 40 5.5
24emb|AL356605.20| Human DNA sequence from clone RP11-414G18 on ch... 40 5.5
25gb|AF233295.1| Penaeus monodon crustacean hyperglycemic hormone ... 40 5.5
26emb|AL160154.11| Human DNA sequence from clone RP11-447N10 on ch... 40 5.5
27emb|BX649410.18| Mouse DNA sequence from clone RP23-168C6 on chr... 40 5.5
28emb|AL928624.4| Mouse DNA sequence from clone RP23-454E10 on chr... 40 5.5
29gb|BC057054.1| Mus musculus BMS1-like, ribosome assembly protein... 40 5.5
30dbj|AK133013.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 5.5
31gb|AC093886.2| Homo sapiens BAC clone RP11-666L21 from 4, comple... 40 5.5
32dbj|AK162178.1| Mus musculus in vitro fertilized eggs cDNA, RIKE... 40 5.5
33gb|AC007467.4|AC007467 Drosophila melanogaster, chromosome 2L, r... 40 5.5
34gb|AC084797.5| Homo sapiens chromosome 16 clone RP11-62O3, compl... 40 5.5
35ref|XM_342746.2| PREDICTED: Rattus norvegicus BMS1-like, ribosom... 40 5.5
36emb|AL929213.5| Zebrafish DNA sequence from clone CH211-144A19, ... 40 5.5
37dbj|AK129082.1| Mus musculus mRNA for mKIAA0187 protein 40 5.5
38gb|BC091626.1| Xenopus laevis cDNA clone IMAGE:7198352, partial cds 40 5.5
39emb|AL391703.9| Human DNA sequence from clone RP11-422P8 on chro... 40 5.5
40gb|AE003668.5| Drosophila melanogaster chromosome 2L, section 77... 40 5.5
41dbj|AP000590.7| Homo sapiens genomic DNA, chromosome 11 clone:CM... 40 5.5
42gb|BC092659.1| Rattus norvegicus BMS1-like, ribosome assembly pr... 40 5.5
43gb|AC140192.3| Mus musculus BAC clone RP24-377O11 from 6, comple... 40 5.5
44gb|AC140466.3| Mus musculus BAC clone RP24-392F9 from 6, complet... 40 5.5
45gb|AC004759.1|AC004759 Drosophila melanogaster DNA sequence (P1s... 40 5.5
46emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB1... 40 5.5
47gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete ge... 40 5.5 
>ref|NM_197154.1| Oryza sativa (japonica cultivar-group) putative RNA-binding protein
            (OSJNBa0041P03.3), mRNA
          Length = 2650

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 362  atgaagccttgcagaaggctctgtgc 387
            ||||||||||||||||||||||||||
Sbjct: 2228 atgaagccttgcagaaggctctgtgc 2203
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>ref|NM_197176.1| Oryza sativa (japonica cultivar-group) putative membrane-associated
            protein (OSJNBa0017E08.17), mRNA
          Length = 2859

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 362  atgaagccttgcagaaggctctgtgc 387
            ||||||||||||||||||||||||||
Sbjct: 2798 atgaagccttgcagaaggctctgtgc 2773
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>gb|AC068923.12| Oryza sativa chromosome 10 BAC OSJNBa0017E08 genomic sequence, complete
             sequence
          Length = 136120

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                       
Query: 362   atgaagccttgcagaaggctctgtgc 387
             ||||||||||||||||||||||||||
Sbjct: 64033 atgaagccttgcagaaggctctgtgc 64058
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>gb|AC068950.11| Oryza sativa chromosome 10 BAC OSJNBa0041P03 genomic sequence, complete
             sequence
          Length = 139614

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                       
Query: 362   atgaagccttgcagaaggctctgtgc 387
             ||||||||||||||||||||||||||
Sbjct: 47093 atgaagccttgcagaaggctctgtgc 47118
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                          
Query: 362      atgaagccttgcagaaggctctgtgc 387
                ||||||||||||||||||||||||||
Sbjct: 18442660 atgaagccttgcagaaggctctgtgc 18442635



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                          
Query: 362      atgaagccttgcagaaggctctgtgc 387
                ||||||||||||||||||||||||||
Sbjct: 18303677 atgaagccttgcagaaggctctgtgc 18303652
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>dbj|AB110443.1| Oryza sativa (indica cultivar-group) Rf-1 gene for fertility restorer,
             PPR794, PPR683, PPR762 genes for hypothetical protein,
             complete cds
          Length = 76363

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                       
Query: 362   atgaagccttgcagaaggctctgtgc 387
             ||||||||||||||||||||||||||
Sbjct: 51399 atgaagccttgcagaaggctctgtgc 51374
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>dbj|AK066573.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072P14, full
            insert sequence
          Length = 2879

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 362  atgaagccttgcagaaggctctgtgc 387
            ||||||||||||||||||||||||||
Sbjct: 2487 atgaagccttgcagaaggctctgtgc 2462
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                          
Query: 362      atgaagccttgcagaaggctctgtgc 387
                ||||||||||||||||||||||||||
Sbjct: 18452713 atgaagccttgcagaaggctctgtgc 18452688



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                          
Query: 362      atgaagccttgcagaaggctctgtgc 387
                ||||||||||||||||||||||||||
Sbjct: 18313330 atgaagccttgcagaaggctctgtgc 18313305
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>emb|CT573098.3| RP43-076G03, complete sequence
          Length = 175456

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 152    ttggaaatgaccaaagcccagattat 177
              ||||||||||| ||||||||||||||
Sbjct: 153912 ttggaaatgactaaagcccagattat 153887
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>emb|CT573270.1| RP43-049F09, complete sequence
          Length = 165723

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 152   ttggaaatgaccaaagcccagattat 177
             ||||||||||| ||||||||||||||
Sbjct: 65874 ttggaaatgactaaagcccagattat 65849
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>gb|AC120003.6| Mus musculus chromosome 8, clone RP24-148H22, complete sequence
          Length = 210466

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 104   aaagggggtaaaaaagacaag 124
             |||||||||||||||||||||
Sbjct: 21247 aaagggggtaaaaaagacaag 21267
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>gb|AC115484.2| Drosophila melanogaster clone BACR06K01, complete sequence
          Length = 168504

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 176   atttttgtcaacaaacatggtctaa 200
             |||||||||||| ||||||||||||
Sbjct: 13623 atttttgtcaaccaacatggtctaa 13647
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>gb|AC124918.5| Rattus norvegicus 4 BAC CH230-4H1 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 228052

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 259    ggtgttatgtagttcttcccc 279
              |||||||||||||||||||||
Sbjct: 173013 ggtgttatgtagttcttcccc 172993
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>gb|AC108104.2| Homo sapiens chromosome 5 clone RP11-198P15, complete sequence
          Length = 96678

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 275   tccccagaagcctctagggtt 295
             |||||||||||||||||||||
Sbjct: 13488 tccccagaagcctctagggtt 13508
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>ref|NM_080191.2| Drosophila melanogaster weckle CG4148-RA (wek), mRNA
          Length = 1659

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 176  atttttgtcaacaaacatggtctaa 200
            |||||||||||| ||||||||||||
Sbjct: 1520 atttttgtcaaccaacatggtctaa 1496
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>gb|AY051673.1| Drosophila melanogaster LD22579 full length cDNA
          Length = 1677

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 176  atttttgtcaacaaacatggtctaa 200
            |||||||||||| ||||||||||||
Sbjct: 1520 atttttgtcaaccaacatggtctaa 1496
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>gb|AE003648.2| Drosophila melanogaster chromosome 2L, section 57 of 83 of the complete
              sequence
          Length = 284900

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 176    atttttgtcaacaaacatggtctaa 200
              |||||||||||| ||||||||||||
Sbjct: 239157 atttttgtcaaccaacatggtctaa 239181
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>ref|NM_194339.1| Mus musculus BMS1-like, ribosome assembly protein (yeast) (Bms1l),
            mRNA
          Length = 4305

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 365  aagccttgcagaaggctctg 384
            ||||||||||||||||||||
Sbjct: 3678 aagccttgcagaaggctctg 3697
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>gb|BC030906.1| Mus musculus BMS1-like, ribosome assembly protein (yeast), mRNA (cDNA
            clone IMAGE:4503618), partial cds
          Length = 3101

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 365  aagccttgcagaaggctctg 384
            ||||||||||||||||||||
Sbjct: 2478 aagccttgcagaaggctctg 2497
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>gb|AC122847.4| Mus musculus BAC clone RP23-163F2 from 6, complete sequence
          Length = 193343

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 371   tgcagaaggctctgtgccac 390
             ||||||||||||||||||||
Sbjct: 78845 tgcagaaggctctgtgccac 78826
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>gb|AY346378.1| Penaeus monodon crustacean hyperglycemic hormone 1 precursor (CHH1)
           gene, complete cds
          Length = 907

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 270 gttcttccccagaagcctct 289
           ||||||||||||||||||||
Sbjct: 175 gttcttccccagaagcctct 194
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>gb|DQ452367.1| Liriomyza huidobrensis clone 3 heat shock protein Hsp40 (Hsp40) mRNA,
            partial cds
          Length = 1081

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 110  ggtaaaaaagacaaggaaac 129
            ||||||||||||||||||||
Sbjct: 992  ggtaaaaaagacaaggaaac 1011
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>gb|DQ452366.1| Liriomyza huidobrensis clone 2 heat shock protein Hsp40 (Hsp40) mRNA,
            partial cds
          Length = 1325

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 110  ggtaaaaaagacaaggaaac 129
            ||||||||||||||||||||
Sbjct: 993  ggtaaaaaagacaaggaaac 1012
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>emb|AL356605.20| Human DNA sequence from clone RP11-414G18 on chromosome 6 Contains part
             of the TCBA1 gene for T-cell lymphoma breakpoint
             associated target 1, complete sequence
          Length = 169493

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 173   attatttttgtcaacaaaca 192
             ||||||||||||||||||||
Sbjct: 68459 attatttttgtcaacaaaca 68478
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>gb|AF233295.1| Penaeus monodon crustacean hyperglycemic hormone 1 precursor (CHH1)
           mRNA, complete cds
          Length = 593

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 270 gttcttccccagaagcctct 289
           ||||||||||||||||||||
Sbjct: 175 gttcttccccagaagcctct 194
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>emb|AL160154.11| Human DNA sequence from clone RP11-447N10 on chromosome 13 Contains a CpG
              island, complete sequence
          Length = 157379

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      cataaatagcattgcatata 20
              ||||||||||||||||||||
Sbjct: 152858 cataaatagcattgcatata 152839
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>emb|BX649410.18| Mouse DNA sequence from clone RP23-168C6 on chromosome 4 Contains a
             ribosomal protein S6 (Rps6) pseudogene and a novel gene,
             complete sequence
          Length = 231582

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 298   gttccacactgggtaaaggt 317
             ||||||||||||||||||||
Sbjct: 81134 gttccacactgggtaaaggt 81153
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>emb|AL928624.4| Mouse DNA sequence from clone RP23-454E10 on chromosome 4, complete
            sequence
          Length = 24246

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 371  tgcagaaggctctgtgccac 390
            ||||||||||||||||||||
Sbjct: 2237 tgcagaaggctctgtgccac 2256
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>gb|BC057054.1| Mus musculus BMS1-like, ribosome assembly protein (yeast), mRNA (cDNA
            clone MGC:67338 IMAGE:6827225), complete cds
          Length = 4305

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 365  aagccttgcagaaggctctg 384
            ||||||||||||||||||||
Sbjct: 3678 aagccttgcagaaggctctg 3697
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>dbj|AK133013.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4930553L04 product:BMS1-like, ribosome
            assembly protein (yeast), full insert sequence
          Length = 3783

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 365  aagccttgcagaaggctctg 384
            ||||||||||||||||||||
Sbjct: 3628 aagccttgcagaaggctctg 3647
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>gb|AC093886.2| Homo sapiens BAC clone RP11-666L21 from 4, complete sequence
          Length = 174332

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 112    taaaaaagacaaggaaacaa 131
              ||||||||||||||||||||
Sbjct: 148456 taaaaaagacaaggaaacaa 148437
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>dbj|AK162178.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length
            enriched library, clone:7420448D03 product:BMS1-like,
            ribosome assembly protein (yeast), full insert sequence
          Length = 4288

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 365  aagccttgcagaaggctctg 384
            ||||||||||||||||||||
Sbjct: 3738 aagccttgcagaaggctctg 3757
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>gb|AC007467.4|AC007467 Drosophila melanogaster, chromosome 2L, region 38E-38F, BAC clone
             BACR07D17, complete sequence
          Length = 173422

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 81    ttgtcatcagatgtattcgctcaaaagg 108
             |||||||||||  |||||||||||||||
Sbjct: 77353 ttgtcatcagacctattcgctcaaaagg 77326
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>gb|AC084797.5| Homo sapiens chromosome 16 clone RP11-62O3, complete sequence
          Length = 163855

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 152    ttggaaatgaccaaagccca 171
              ||||||||||||||||||||
Sbjct: 103554 ttggaaatgaccaaagccca 103573
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>ref|XM_342746.2| PREDICTED: Rattus norvegicus BMS1-like, ribosome assembly protein
            (yeast) (predicted) (Bms1l_predicted), mRNA
          Length = 4206

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 365  aagccttgcagaaggctctg 384
            ||||||||||||||||||||
Sbjct: 3596 aagccttgcagaaggctctg 3615
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>emb|AL929213.5| Zebrafish DNA sequence from clone CH211-144A19, complete sequence
          Length = 169897

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   tatttttgtcaacaaacatg 194
             ||||||||||||||||||||
Sbjct: 78890 tatttttgtcaacaaacatg 78909
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>dbj|AK129082.1| Mus musculus mRNA for mKIAA0187 protein
          Length = 4246

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 365  aagccttgcagaaggctctg 384
            ||||||||||||||||||||
Sbjct: 3638 aagccttgcagaaggctctg 3657
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>gb|BC091626.1| Xenopus laevis cDNA clone IMAGE:7198352, partial cds
          Length = 3802

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 365  aagccttgcagaaggctctg 384
            ||||||||||||||||||||
Sbjct: 3632 aagccttgcagaaggctctg 3651
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>emb|AL391703.9| Human DNA sequence from clone RP11-422P8 on chromosome 1 Contains the
             5' end of the GNG12 gene for guanine nucleotide binding
             protein (G protein), gamma 12, the 5' end of a novel gene
             (FLJ38762, FLJ42034) and a CpG island, complete sequence
          Length = 191741

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 121   caaggaaacaagcacgtttagcag 144
             ||||||||||||||||||| ||||
Sbjct: 98968 caaggaaacaagcacgttttgcag 98945
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>gb|AE003668.5| Drosophila melanogaster chromosome 2L, section 77 of 83 of the complete
             sequence
          Length = 270158

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 81    ttgtcatcagatgtattcgctcaaaagg 108
             |||||||||||  |||||||||||||||
Sbjct: 67167 ttgtcatcagacctattcgctcaaaagg 67140
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>dbj|AP000590.7| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-52H4, complete
             sequence
          Length = 114288

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 363   tgaagccttgcagaaggctc 382
             ||||||||||||||||||||
Sbjct: 79584 tgaagccttgcagaaggctc 79603
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>gb|BC092659.1| Rattus norvegicus BMS1-like, ribosome assembly protein (yeast),
           mRNA (cDNA clone IMAGE:7321247), partial cds
          Length = 1478

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 365 aagccttgcagaaggctctg 384
           ||||||||||||||||||||
Sbjct: 841 aagccttgcagaaggctctg 860
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>gb|AC140192.3| Mus musculus BAC clone RP24-377O11 from 6, complete sequence
          Length = 160574

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 365   aagccttgcagaaggctctg 384
             ||||||||||||||||||||
Sbjct: 31771 aagccttgcagaaggctctg 31752
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>gb|AC140466.3| Mus musculus BAC clone RP24-392F9 from 6, complete sequence
          Length = 148392

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 365    aagccttgcagaaggctctg 384
              ||||||||||||||||||||
Sbjct: 107554 aagccttgcagaaggctctg 107535
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>gb|AC004759.1|AC004759 Drosophila melanogaster DNA sequence (P1s DS04217 (D56) and DS00582
             (D85)), complete sequence
          Length = 142799

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 81    ttgtcatcagatgtattcgctcaaaagg 108
             |||||||||||  |||||||||||||||
Sbjct: 12184 ttgtcatcagacctattcgctcaaaagg 12211
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>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 2       ataaatagcattgcatatag 21
               ||||||||||||||||||||
Sbjct: 2819035 ataaatagcattgcatatag 2819054
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>gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete genome
          Length = 2905187

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 266     tgtagttcttccccagaagc 285
               ||||||||||||||||||||
Sbjct: 1361884 tgtagttcttccccagaagc 1361865


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,554,920
Number of Sequences: 3902068
Number of extensions: 3554920
Number of successful extensions: 88329
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88204
Number of HSP's gapped (non-prelim): 125
length of query: 409
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 387
effective length of database: 17,147,199,772
effective search space: 6635966311764
effective search space used: 6635966311764
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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