Clone Information

BLAST Search Result

Clone Name	rbastl40d09
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	NOX3_RAT (Q672K1) NADPH oxidase 3 (EC 1.6.3.-)	60	1e-09
2	NOX3_HUMAN (Q9HBY0) NADPH oxidase 3 (EC 1.6.3.-) (gp91phox homol...	59	4e-09
3	CY24B_HUMAN (P04839) Cytochrome b-245 heavy chain (p22 phagocyte...	58	5e-09
4	NOX3_MOUSE (Q672J9) NADPH oxidase 3 (EC 1.6.3.-)	58	5e-09
5	CY24B_PIG (P52649) Cytochrome b-245 heavy chain (p22 phagocyte B...	57	1e-08
6	NOX1_RAT (Q9WV87) NADPH oxidase homolog 1 (NOX-1) (NOH-1) (NADH/...	57	1e-08
7	CY24B_BOVIN (O46522) Cytochrome b-245 heavy chain (p22 phagocyte...	57	1e-08
8	CY24B_BISBI (Q95L74) Cytochrome b-245 heavy chain (p22 phagocyte...	57	1e-08
9	CY24B_MOUSE (Q61093) Cytochrome b-245 heavy chain (p22 phagocyte...	56	2e-08
10	NOX1_HUMAN (Q9Y5S8) NADPH oxidase homolog 1 (NOX-1) (NOH-1) (NAD...	55	5e-08
11	NOX5_HUMAN (Q96PH1) NADPH oxidase 5 (EC 1.6.3.-)	47	8e-06
12	DUOX1_CAEEL (O61213) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1...	44	7e-05
13	DUOX1_CANFA (Q9MZF4) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1...	42	5e-04
14	DUOX1_RAT (Q8CIY2) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.1...	40	0.001
15	DUOX1_PIG (Q8HZK3) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.1...	40	0.002
16	DUOX1_HUMAN (Q9NRD9) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1...	40	0.002
17	DUOX2_PIG (Q8HZK2) Dual oxidase 2 precursor (EC 1.6.3.1) (EC 1.1...	39	0.003
18	DUOX2_HUMAN (Q9NRD8) Dual oxidase 2 precursor (EC 1.6.3.1) (EC 1...	37	0.015
19	DUOX_DROME (Q9VQH2) Dual oxidase (EC 1.6.3.1) (EC 1.11.1.-)	35	0.043
20	DUOX2_RAT (Q9ES45) Dual oxidase 2 precursor (EC 1.6.3.1) (EC 1.1...	34	0.095
21	CPSM_RAT (P07756) Carbamoyl-phosphate synthase [ammonia], mitoch...	33	0.16
22	CPSM_MOUSE (Q8C196) Carbamoyl-phosphate synthase [ammonia], mito...	33	0.16
23	CPSM_HUMAN (P31327) Carbamoyl-phosphate synthase [ammonia], mito...	33	0.16
24	SPY1_MOUSE (Q9QXV9) Sprouty homolog 1 (Spry-1)	30	1.1
25	SPY1_HUMAN (O43609) Sprouty homolog 1 (Spry-1)	30	1.1
26	INT1_HUMAN (Q8N201) Integrator complex subunit 1 (Int1)	30	1.1
27	INT1_MOUSE (Q6P4S8) Integrator complex subunit 1 (Int1)	30	1.1
28	CPSM_RANCA (Q91293) Carbamoyl-phosphate synthase [ammonia], mito...	30	1.4
29	CID_DROME (P19538) Protein cubitus interruptus	30	1.4
30	PLXA3_HUMAN (P51805) Plexin-A3 precursor (Plexin-4) (Semaphorin ...	29	3.1
31	TXND8_MOUSE (Q69AB2) Thioredoxin domain-containing protein 8 (Sp...	28	4.0
32	CTAA_BACSU (P12946) Cytochrome aa3-controlling protein	28	5.2
33	RPOC_BORGA (Q661N0) DNA-directed RNA polymerase beta' chain (EC ...	28	6.8
34	Y514_METJA (Q57934) Hypothetical polyferredoxin-like protein MJ0514	28	6.8
35	PYR1_DICDI (P20054) Protein PYR1-3 [Includes: Glutamine-dependen...	28	6.8
36	CARB_SCHPO (O94313) Carbamoyl-phosphate synthase arginine-specif...	28	6.8
37	DNL3_HUMAN (P49916) DNA ligase 3 (EC 6.5.1.1) (DNA ligase III) (...	27	8.9
38	WDR50_MOUSE (Q5SSI6) WD-repeat protein 50	27	8.9
39	METE_BRAJA (Q9AMV8) 5-methyltetrahydropteroyltriglutamate--homoc...	27	8.9
40	PROML_DROME (P82295) Prominin-like protein	27	8.9
41	SYT8_HUMAN (Q8NBV8) Synaptotagmin-8 (Synaptotagmin VIII) (SytVIII)	27	8.9

>NOX3_RAT (Q672K1) NADPH oxidase 3 (EC 1.6.3.-)|
          Length = 568

 Score = 60.1 bits (144), Expect = 1e-09
 Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
 Frame = -1

Query: 337 HAKKGVDILSGTSVKTHFARPNWRSVFKRVAVNHENQRVGVFYCGEPVLVPQLRQLSADF 158
           H  + +D+++G   KT + RPNW   FK++A NH +  +GVF+CG   +   L+++   +
Sbjct: 492 HWDESLDVITGLKQKTFYGRPNWNEEFKQIAYNHPSSSIGVFFCGPKAMSKTLQKMCRLY 551

Query: 157 TPK--TNTKFEFHKENF 113
           +        F ++KENF
Sbjct: 552 SSSDPRGVHFYYNKENF 568

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>NOX3_HUMAN (Q9HBY0) NADPH oxidase 3 (EC 1.6.3.-) (gp91phox homolog 3) (GP91-3)|
           (Mitogenic oxidase 2)
          Length = 568

 Score = 58.5 bits (140), Expect = 4e-09
 Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
 Frame = -1

Query: 379 DARSALIVMLQELQHAKKGVDILSGTSVKTHFARPNWRSVFKRVAVNHENQRVGVFYCGE 200
           D   AL + L    H  +  D+++G   KT + RPNW + FK++A NH +  +GVF+CG 
Sbjct: 482 DENQALHIAL----HWDENTDVITGLKQKTFYGRPNWNNEFKQIAYNHPSSSIGVFFCGP 537

Query: 199 PVLVPQLRQL-----SADFTPKTNTKFEFHKENF 113
             L   L+++     SAD        F ++KE+F
Sbjct: 538 KALSRTLQKMCHLYSSAD---PRGVHFYYNKESF 568

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>CY24B_HUMAN (P04839) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)|
           (Neutrophil cytochrome b 91 kDa polypeptide)
           (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane
           glycoprotein gp91phox) (Cytochrome b(558) beta chain)
           (Cytochrome b558 be
          Length = 569

 Score = 58.2 bits (139), Expect = 5e-09
 Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
 Frame = -1

Query: 337 HAKKGVDILSGTSVKTHFARPNWRSVFKRVAVNHENQRVGVFYCGEPVLVPQL--RQLSA 164
           H  +  D+++G   KT + RPNW + FK +A  H N R+GVF CG   L   L  + +S 
Sbjct: 493 HHDEEKDVITGLKQKTLYGRPNWDNEFKTIASQHPNTRIGVFLCGPEALAETLSKQSISN 552

Query: 163 DFTPKTNTKFEFHKENF 113
             +      F F+KENF
Sbjct: 553 SESGPRGVHFIFNKENF 569

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>NOX3_MOUSE (Q672J9) NADPH oxidase 3 (EC 1.6.3.-)|
          Length = 568

 Score = 58.2 bits (139), Expect = 5e-09
 Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
 Frame = -1

Query: 337 HAKKGVDILSGTSVKTHFARPNWRSVFKRVAVNHENQRVGVFYCGEPVLVPQLRQLSADF 158
           H  + +D+++G   K  + RPNW   FK++A NH +  +GVF+CG   +   L+++   +
Sbjct: 492 HWDESLDVITGLKQKAFYGRPNWNDEFKQIAYNHPSSSIGVFFCGSKAMSKTLQKMCRLY 551

Query: 157 T--PKTNTKFEFHKENF 113
           +        F ++KENF
Sbjct: 552 SSVDPRGVHFYYNKENF 568

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>CY24B_PIG (P52649) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)|
           (Neutrophil cytochrome b 91 kDa polypeptide)
           (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane
           glycoprotein gp91phox) (Cytochrome b(558) beta chain)
           (Cytochrome b558 beta
          Length = 484

 Score = 57.0 bits (136), Expect = 1e-08
 Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
 Frame = -1

Query: 337 HAKKGVDILSGTSVKTHFARPNWRSVFKRVAVNHENQRVGVFYCGEPVLVPQLRQ---LS 167
           H  +  D+++G   KT + RPNW + FK +A  H   R+GVF CG   L   L +    +
Sbjct: 408 HHDEEKDVITGLKQKTLYGRPNWDNEFKTIASQHPTTRIGVFLCGPEALAETLNKQCISN 467

Query: 166 ADFTPKTNTKFEFHKENF 113
           +D +P+    F F+KENF
Sbjct: 468 SDSSPR-GVHFIFNKENF 484

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>NOX1_RAT (Q9WV87) NADPH oxidase homolog 1 (NOX-1) (NOH-1) (NADH/NADPH|
           mitogenic oxidase subunit P65-MOX) (Mitogenic oxidase 1)
           (MOX1)
          Length = 563

 Score = 57.0 bits (136), Expect = 1e-08
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
 Frame = -1

Query: 328 KGVDILSGTSVKTHFARPNWRSVFKRVAVNHENQRVGVFYCGEPVLVPQLRQLSADFT-- 155
           +  D+L+G   KT F RP W + F R+A  H    VGVF CG P L   LR+    ++  
Sbjct: 490 RATDVLTGLKQKTSFGRPMWDNEFSRIATAHPKSVVGVFLCGPPTLAKSLRKCCRRYSSL 549

Query: 154 PKTNTKFEFHKENF 113
                +F F+KE F
Sbjct: 550 DPRKVQFYFNKETF 563

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>CY24B_BOVIN (O46522) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)|
           (Neutrophil cytochrome b 91 kDa polypeptide)
           (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane
           glycoprotein gp91phox) (Cytochrome b(558) beta chain)
           (Cytochrome b558 be
          Length = 570

 Score = 56.6 bits (135), Expect = 1e-08
 Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
 Frame = -1

Query: 337 HAKKGVDILSGTSVKTHFARPNWRSVFKRVAVNHENQRVGVFYCGEPVLVPQLRQ--LSA 164
           H  +  D+++G   KT + RPNW + FK +   H N R+GVF CG   L   L +  +S 
Sbjct: 494 HHDEEKDVITGLKQKTLYGRPNWDNEFKTIGSQHPNTRIGVFLCGPEALADTLNKQCISN 553

Query: 163 DFTPKTNTKFEFHKENF 113
             +      F F+KENF
Sbjct: 554 SDSGPRGVHFIFNKENF 570

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>CY24B_BISBI (Q95L74) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)|
           (Neutrophil cytochrome b 91 kDa polypeptide)
           (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane
           glycoprotein gp91phox) (Cytochrome b(558) beta chain)
           (Cytochrome b558 be
          Length = 570

 Score = 56.6 bits (135), Expect = 1e-08
 Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
 Frame = -1

Query: 337 HAKKGVDILSGTSVKTHFARPNWRSVFKRVAVNHENQRVGVFYCGEPVLVPQLRQ--LSA 164
           H  +  D+++G   KT + RPNW + FK +   H N R+GVF CG   L   L +  +S 
Sbjct: 494 HHDEEKDVITGLKQKTLYGRPNWDNEFKTIGSQHPNTRIGVFLCGPEALADTLNKQCISN 553

Query: 163 DFTPKTNTKFEFHKENF 113
             +      F F+KENF
Sbjct: 554 SDSGPRGVHFIFNKENF 570

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>CY24B_MOUSE (Q61093) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)|
           (Neutrophil cytochrome b 91 kDa polypeptide)
           (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane
           glycoprotein gp91phox) (Cytochrome b(558) beta chain)
           (Cytochrome b558 be
          Length = 570

 Score = 55.8 bits (133), Expect = 2e-08
 Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
 Frame = -1

Query: 337 HAKKGVDILSGTSVKTHFARPNWRSVFKRVAVNHENQRVGVFYCGEPVLVPQL--RQLSA 164
           H  +  D+++G   KT + RPNW + FK +A  H N  +GVF CG   L   L  + +S 
Sbjct: 494 HHDEEKDVITGLKQKTLYGRPNWDNEFKTIASEHPNTTIGVFLCGPEALAETLSKQSISN 553

Query: 163 DFTPKTNTKFEFHKENF 113
             +      F F+KENF
Sbjct: 554 SESGPRGVHFIFNKENF 570

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>NOX1_HUMAN (Q9Y5S8) NADPH oxidase homolog 1 (NOX-1) (NOH-1) (NADH/NADPH|
           mitogenic oxidase subunit P65-MOX) (Mitogenic oxidase 1)
           (MOX1)
          Length = 564

 Score = 54.7 bits (130), Expect = 5e-08
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
 Frame = -1

Query: 328 KGVDILSGTSVKTHFARPNWRSVFKRVAVNHENQRVGVFYCGEPVLVPQLRQLSADFT-- 155
           K  DI++G   KT F RP W + F  +A +H    VGVF CG   L   LR+    ++  
Sbjct: 491 KATDIVTGLKQKTSFGRPMWDNEFSTIATSHPKSVVGVFLCGPRTLAKSLRKCCHRYSSL 550

Query: 154 PKTNTKFEFHKENF 113
                +F F+KENF
Sbjct: 551 DPRKVQFYFNKENF 564

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>NOX5_HUMAN (Q96PH1) NADPH oxidase 5 (EC 1.6.3.-)|
          Length = 765

 Score = 47.4 bits (111), Expect = 8e-06
 Identities = 29/96 (30%), Positives = 47/96 (48%)
 Frame = -1

Query: 400 SSVYQEGDARSALIVMLQELQHAKKGVDILSGTSVKTHFARPNWRSVFKRVAVNHENQRV 221
           +S   + D ++  + M  +L   K+  D ++G   +T   RP+W  VF++VA   +  +V
Sbjct: 677 TSALGKNDMKAIGLQMALDLLANKEKKDSITGLQTRTQPGRPDWSKVFQKVAAEKKG-KV 735

Query: 220 GVFYCGEPVLVPQLRQLSADFTPKTNTKFEFHKENF 113
            VF+CG P L   L+     F       F F +ENF
Sbjct: 736 QVFFCGSPALAKVLKGHCEKF------GFRFFQENF 765

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>DUOX1_CAEEL (O61213) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-) (DUOX1)|
            (NADPH thyroid oxidase 1) (Blistered cuticle protein 3)
          Length = 1497

 Score = 44.3 bits (103), Expect = 7e-05
 Identities = 21/82 (25%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
 Frame = -1

Query: 400  SSVYQEGDARSALIVMLQE-LQHAKKGVDILSGTSVKTHFARPNWRSVFKRVAVNHENQ- 227
            +  + + D R+ ++ + ++  +    G+ + +G   K HF RPN+++ F+ +   H+ Q 
Sbjct: 1399 TQTFHKFDLRTTMLYICEKHFRATNSGISMFTGLHAKNHFGRPNFKAFFQFIQSEHKEQS 1458

Query: 226  RVGVFYCGEPVLVPQLRQLSAD 161
            ++GVF CG   L   + +  AD
Sbjct: 1459 KIGVFSCGPVNLNESIAEGCAD 1480

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>DUOX1_CANFA (Q9MZF4) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-) (NADPH|
            thyroid oxidase 1) (Thyroid oxidase 1)
          Length = 1551

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
 Frame = -1

Query: 379  DARSALIVMLQELQHAKKGVDILSGTSVKTHFARPNWRSVFKRVAVNHENQR-VGVFYCG 203
            D R+ ++ + +          + +G    THF RP +   FK +   H   R +GVF CG
Sbjct: 1462 DLRTTMLYICERHFQKVLNRSLFTGLRSITHFGRPPFEPFFKSLQEVHPQVRKIGVFSCG 1521

Query: 202  EPVLVPQLRQLSADFTPKTNTKFEFHKENF 113
             P +   + +       +  T F  H ENF
Sbjct: 1522 PPGMTKNVEKACQLINRQDRTHFSHHYENF 1551

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>DUOX1_RAT (Q8CIY2) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-)|
          Length = 1551

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
 Frame = -1

Query: 379  DARSALIVMLQELQHAKKGVDILSGTSVKTHFARPNWRSVFKRVAVNHENQR-VGVFYCG 203
            D R+ ++ + +          + +G    THF RP +   F  +   H   R +GVF CG
Sbjct: 1462 DLRTTMLYICERHFQKVLNRSLFTGLRSVTHFGRPPFEPFFNSLQEVHPQVRKIGVFSCG 1521

Query: 202  EPVLVPQLRQLSADFTPKTNTKFEFHKENF 113
             P +   + +       +  T F  H ENF
Sbjct: 1522 PPGMTKNVEKACQLINKQDRTHFSHHYENF 1551

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>DUOX1_PIG (Q8HZK3) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-)|
          Length = 1553

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
 Frame = -1

Query: 379  DARSALIVMLQELQHAKKGVDILSGTSVKTHFARPNWRSVFKRVAVNHENQR-VGVFYCG 203
            D R+ ++ + +          + +G    THF RP +   F  +   H   R +GVF CG
Sbjct: 1464 DLRTTMLYICERHFQKVLNRSLFTGLRSITHFGRPPFEPFFNSLQEVHPQVRKIGVFSCG 1523

Query: 202  EPVLVPQLRQLSADFTPKTNTKFEFHKENF 113
             P +   + +       +  T F  H ENF
Sbjct: 1524 PPGMTKNVEKACQLINRQDRTHFSHHYENF 1553

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>DUOX1_HUMAN (Q9NRD9) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-) (NADPH|
            thyroid oxidase 1) (Thyroid oxidase 1) (Large NOX 1)
            (Long NOX 1)
          Length = 1551

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
 Frame = -1

Query: 379  DARSALIVMLQELQHAKKGVDILSGTSVKTHFARPNWRSVFKRVAVNHENQR-VGVFYCG 203
            D R+ ++ + +          + +G    THF RP +   F  +   H   R +GVF CG
Sbjct: 1462 DLRTTMLYICERHFQKVLNRSLFTGLRSITHFGRPPFEPFFNSLQEVHPQVRKIGVFSCG 1521

Query: 202  EPVLVPQLRQLSADFTPKTNTKFEFHKENF 113
             P +   + +       +  T F  H ENF
Sbjct: 1522 PPGMTKNVEKACQLINRQDRTHFSHHYENF 1551

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>DUOX2_PIG (Q8HZK2) Dual oxidase 2 precursor (EC 1.6.3.1) (EC 1.11.1.-)|
            (NADH/NADPH thyroid oxidase p138-tox)
          Length = 1545

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
 Frame = -1

Query: 379  DARSALIVMLQELQHAKKGVDILSGTSVKTHFARPNWRSVFKRVAVNHENQR-VGVFYCG 203
            D R+ ++ + +          + +G    THF RP +   F  +   H   R +GVF CG
Sbjct: 1456 DLRTTMLYICERHFQKVLNRSLFTGLRSITHFGRPPFEPFFNSLQEVHPQVRKIGVFSCG 1515

Query: 202  EPVLVPQLRQLSADFTPKTNTKFEFHKENF 113
             P +   + +       +  T F  H ENF
Sbjct: 1516 PPGMTKNVEKTCQLINRQDQTHFVHHYENF 1545

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>DUOX2_HUMAN (Q9NRD8) Dual oxidase 2 precursor (EC 1.6.3.1) (EC 1.11.1.-) (NADPH|
            oxidase/peroxidase DUOX2) (NADPH thyroid oxidase 2)
            (Thyroid oxidase 2) (NADH/NADPH thyroid oxidase p138-tox)
            (p138 thyroid oxidase) (Large NOX 2) (Long NOX 2)
          Length = 1548

 Score = 36.6 bits (83), Expect = 0.015
 Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 1/90 (1%)
 Frame = -1

Query: 379  DARSALIVMLQELQHAKKGVDILSGTSVKTHFARPNWRSVFKRVAVNHENQR-VGVFYCG 203
            D R+ ++ + +          + +G    THF RP +   F  +   H   R +GVF CG
Sbjct: 1459 DLRTTMLYICERHFQKVLNRSLFTGLRSITHFGRPPFEPFFNSLQEVHPQVRKIGVFSCG 1518

Query: 202  EPVLVPQLRQLSADFTPKTNTKFEFHKENF 113
             P +   + +       +    F  H ENF
Sbjct: 1519 PPGMTKNVEKACQLVNRQDRAHFMHHYENF 1548

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>DUOX_DROME (Q9VQH2) Dual oxidase (EC 1.6.3.1) (EC 1.11.1.-)|
          Length = 1475

 Score = 35.0 bits (79), Expect = 0.043
 Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 3/96 (3%)
 Frame = -1

Query: 391  YQEGDARSALIVMLQELQHAKKGVDILSGTSVKTHFARPNWRSVFKRVAVNHEN-QRVGV 215
            + + D R+ ++ + +          I +G     HF RP+  S  K V   H    ++GV
Sbjct: 1380 FHKFDLRTTMLYICENHFQRLSKTSIFTGLKAVNHFGRPDMSSFLKFVQKKHSYVSKIGV 1439

Query: 214  FYCGEPVLVPQLRQLSADFTPKTN--TKFEFHKENF 113
            F CG   L   +   + D   KT     F  H ENF
Sbjct: 1440 FSCGPRPLTKSVMS-ACDEVNKTRKLPYFIHHFENF 1474

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>DUOX2_RAT (Q9ES45) Dual oxidase 2 precursor (EC 1.6.3.1) (EC 1.11.1.-)|
            (NADH/NADPH thyroid oxidase THOX2) (Thyroid oxidase 2)
            (Large NOX 2) (Long NOX 2)
          Length = 1517

 Score = 33.9 bits (76), Expect = 0.095
 Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 1/90 (1%)
 Frame = -1

Query: 379  DARSALIVMLQELQHAKKGVDILSGTSVKTHFARPNWRSVFKRVAVNHEN-QRVGVFYCG 203
            D R+ ++ + +          + +G    THF RP +      +   H    ++GVF CG
Sbjct: 1428 DLRTTMLYICERHFQKVLNRSLFTGLRSVTHFGRPPFELFLDSLQEVHPQVHKIGVFSCG 1487

Query: 202  EPVLVPQLRQLSADFTPKTNTKFEFHKENF 113
             P +   + +       +    F  H ENF
Sbjct: 1488 PPGMTKNVEKACQLINRQDRAHFVHHYENF 1517

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>CPSM_RAT (P07756) Carbamoyl-phosphate synthase [ammonia], mitochondrial|
            precursor (EC 6.3.4.16) (Carbamoyl-phosphate synthetase
            I) (CPSase I)
          Length = 1500

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +3

Query: 231  FSWLTATRLKTLRQLGRAK*VLTLVPDKMSTPFFAC 338
            F W   + ++TLRQLG+   V+   P+ +ST F  C
Sbjct: 992  FDWCAVSSIRTLRQLGKKTVVVNCNPETVSTDFDEC 1027

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>CPSM_MOUSE (Q8C196) Carbamoyl-phosphate synthase [ammonia], mitochondrial|
            precursor (EC 6.3.4.16) (Carbamoyl-phosphate synthetase
            I) (CPSase I)
          Length = 1500

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +3

Query: 231  FSWLTATRLKTLRQLGRAK*VLTLVPDKMSTPFFAC 338
            F W   + ++TLRQLG+   V+   P+ +ST F  C
Sbjct: 992  FDWCAVSSIRTLRQLGKKTVVVNCNPETVSTDFDEC 1027

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>CPSM_HUMAN (P31327) Carbamoyl-phosphate synthase [ammonia], mitochondrial|
            precursor (EC 6.3.4.16) (Carbamoyl-phosphate synthetase
            I) (CPSase I)
          Length = 1500

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +3

Query: 231  FSWLTATRLKTLRQLGRAK*VLTLVPDKMSTPFFAC 338
            F W   + ++TLRQLG+   V+   P+ +ST F  C
Sbjct: 992  FDWCAVSSIRTLRQLGKKTVVVNCNPETVSTDFDEC 1027

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>SPY1_MOUSE (Q9QXV9) Sprouty homolog 1 (Spry-1)|
          Length = 313

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 18/55 (32%), Positives = 22/55 (40%)
 Frame = -2

Query: 195 FLCRSCGSCRQISPPRQTQSLSFTRRTSSSVACIGICLCHASSGELYGLYYYFVK 31
           F+C  CG C+           +  R   S +AC   CLC A S   YG     VK
Sbjct: 173 FICEQCGKCK-------CGECTAPRALPSCLACDRQCLCSAESMVEYGTCMCLVK 220

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>SPY1_HUMAN (O43609) Sprouty homolog 1 (Spry-1)|
          Length = 319

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 18/55 (32%), Positives = 22/55 (40%)
 Frame = -2

Query: 195 FLCRSCGSCRQISPPRQTQSLSFTRRTSSSVACIGICLCHASSGELYGLYYYFVK 31
           F+C  CG C+           +  R   S +AC   CLC A S   YG     VK
Sbjct: 179 FICEQCGKCK-------CGECTAPRTLPSCLACNRQCLCSAESMVEYGTCMCLVK 226

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>INT1_HUMAN (Q8N201) Integrator complex subunit 1 (Int1)|
          Length = 2190

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 20/59 (33%), Positives = 27/59 (45%)
 Frame = +2

Query: 182  LRHKNRLTTIENPDTLILMVDRDTLEDASPIRPGKVSLDAGSGQDVNSLLCMLEFLKHD 358
            LR  + L    NPD L+ ++ R     + P     V    GS  DV  + C+ EFL HD
Sbjct: 860  LRLGHLLCRSRNPDFLLHIIQRQASSQSMPWLADLVQSSEGS-LDVLPVQCLCEFLLHD 917

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>INT1_MOUSE (Q6P4S8) Integrator complex subunit 1 (Int1)|
          Length = 2126

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 20/59 (33%), Positives = 27/59 (45%)
 Frame = +2

Query: 182  LRHKNRLTTIENPDTLILMVDRDTLEDASPIRPGKVSLDAGSGQDVNSLLCMLEFLKHD 358
            LR  + L    NPD L+ ++ R     + P     V    GS  DV  + C+ EFL HD
Sbjct: 866  LRLGHLLCRSRNPDFLLHIIQRQASSQSMPWLADLVQSSEGS-LDVLPVQCLCEFLLHD 923

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>CPSM_RANCA (Q91293) Carbamoyl-phosphate synthase [ammonia], mitochondrial|
            precursor (EC 6.3.4.16) (Carbamoyl-phosphate synthetase
            I) (CPSase I)
          Length = 1496

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +3

Query: 231  FSWLTATRLKTLRQLGRAK*VLTLVPDKMSTPFFAC 338
            F W   + ++TLR +G+   V+   P+ +ST F  C
Sbjct: 989  FDWCAVSSIRTLRHVGKKTVVVNCNPETVSTDFDEC 1024

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>CID_DROME (P19538) Protein cubitus interruptus|
          Length = 1397

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 23/74 (31%), Positives = 34/74 (45%)
 Frame = -1

Query: 355  MLQELQHAKKGVDILSGTSVKTHFARPNWRSVFKRVAVNHENQRVGVFYCGEPVLVPQLR 176
            MLQ L   K   + L     K H A P   +V + +A NH  ++  ++Y  + +L P   
Sbjct: 1088 MLQYLNLVKDDTNHLE----KEHQAVPVGSNVSETIASNHYREQSNIYYTNKQILTP--- 1140

Query: 175  QLSADFTPKTNTKF 134
              + D  P T TKF
Sbjct: 1141 PSNVDIQPNT-TKF 1153

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>PLXA3_HUMAN (P51805) Plexin-A3 precursor (Plexin-4) (Semaphorin receptor SEX)|
          Length = 1871

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 395 CVSRGRCSFRTHCHASRT 342
           C+S  RC  RTHC A +T
Sbjct: 808 CISEHRCQLRTHCPAPKT 825

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>TXND8_MOUSE (Q69AB2) Thioredoxin domain-containing protein 8|
           (Spermatid-specific thioredoxin-3) (Sptrx-3)
           (Thioredoxin-6)
          Length = 127

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -2

Query: 219 GFSIVVSLFLCRSCGSCRQISPPRQTQSLSFTRRTSSSV 103
           G  +VV  F  + CG C+ I+P  Q  SL +   T + V
Sbjct: 19  GNKLVVVEFSAKWCGPCKTIAPVFQAMSLKYQNVTFAQV 57

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>CTAA_BACSU (P12946) Cytochrome aa3-controlling protein|
          Length = 306

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 12/43 (27%), Positives = 25/43 (58%)
 Frame = -2

Query: 132 SFTRRTSSSVACIGICLCHASSGELYGLYYYFVKVGNKMGVVL 4
           ++ R T SS+AC  + LC   +  L   ++ +V++G++   +L
Sbjct: 180 AYVRHTESSLACPNVPLCSPLNNGLPTQFHEWVQMGHRAAALL 222

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>RPOC_BORGA (Q661N0) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
            beta' subunit) (Transcriptase beta' chain) (RNA
            polymerase beta' subunit)
          Length = 1377

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +2

Query: 212  ENPDTLILMVDRDTLEDASPIRPGKVSLDAGSGQDVN 322
            E+ D  I ++D   +E AS + PG   L    GQ++N
Sbjct: 1079 ESLDPRIFIIDSSGMEVASYVLPGDAYLQVEDGQNIN 1115

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>Y514_METJA (Q57934) Hypothetical polyferredoxin-like protein MJ0514|
          Length = 250

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 213 SIVVSLFLCRSCGSCRQISPPR 148
           SI V+L LC  CG+C ++ P +
Sbjct: 155 SIEVNLDLCMGCGACAEVCPKK 176

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>PYR1_DICDI (P20054) Protein PYR1-3 [Includes: Glutamine-dependent|
            carbamoyl-phosphate synthase (EC 6.3.5.5); Aspartate
            carbamoyltransferase (EC 2.1.3.2); Dihydroorotase (EC
            3.5.2.3)]
          Length = 2185

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +3

Query: 231  FSWLTATRLKTLRQLGRAK*VLTLVPDKMSTPFFAC 338
            F W   + ++TLR LG    ++   P+ +ST +  C
Sbjct: 926  FDWCAVSCIRTLRSLGLKSIMINFNPETVSTDYDEC 961

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>CARB_SCHPO (O94313) Carbamoyl-phosphate synthase arginine-specific large chain|
           (EC 6.3.5.5) (Arginine-specific carbamoyl-phosphate
           synthetase, ammonia chain)
          Length = 1160

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +3

Query: 231 FSWLTATRLKTLRQLGRAK*VLTLVPDKMSTPFFAC 338
           F W   +  +TLR+LG +  ++   P+ +ST F  C
Sbjct: 647 FDWCGVSCARTLRKLGHSTIMVNYNPETVSTDFDEC 682

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>DNL3_HUMAN (P49916) DNA ligase 3 (EC 6.5.1.1) (DNA ligase III)|
           (Polydeoxyribonucleotide synthase [ATP] 3)
          Length = 922

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 16/53 (30%), Positives = 24/53 (45%)
 Frame = +2

Query: 200 LTTIENPDTLILMVDRDTLEDASPIRPGKVSLDAGSGQDVNSLLCMLEFLKHD 358
           L TI+  D  +L + + T ED       +   D  S    N L C++  +KHD
Sbjct: 284 LLTIQEVDEFLLRLSKLTKEDEQQ----QALQDIASRCTANDLKCIIRLIKHD 332

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>WDR50_MOUSE (Q5SSI6) WD-repeat protein 50|
          Length = 552

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = +2

Query: 314 DVNSLLCMLEFLKHDNECGTSIA 382
           DVNS  CM  FL   + CG SIA
Sbjct: 406 DVNSRKCMNRFLDEGSLCGLSIA 428

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>METE_BRAJA (Q9AMV8) 5-methyltetrahydropteroyltriglutamate--homocysteine|
           methyltransferase (EC 2.1.1.14) (Methionine synthase,
           vitamin-B12 independent isozyme) (Cobalamin-independent
           methionine synthase)
          Length = 781

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +2

Query: 158 EICRQLPQLRHKNRLTTIENPDTLILMVDRDTLEDASPIR 277
           E+CRQL  L  ++ +  +EN    ++ +D   L +  P+R
Sbjct: 594 EVCRQLA-LAMRDEVRDLENAGAAMIQIDEAALREGLPLR 632

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>PROML_DROME (P82295) Prominin-like protein|
          Length = 1013

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 20/60 (33%), Positives = 27/60 (45%)
 Frame = -2

Query: 195 FLCRSCGSCRQISPPRQTQSLSFTRRTSSSVACIGICLCHASSGELYGLYYYFVKVGNKM 16
           F C  C  CRQ  PP        +++ +    C GICL     G ++G+   FV   NKM
Sbjct: 190 FCC--CRRCRQGCPP------CTSKQDAQRRFCCGICLLILIIGLIFGIIIAFVT--NKM 239

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>SYT8_HUMAN (Q8NBV8) Synaptotagmin-8 (Synaptotagmin VIII) (SytVIII)|
          Length = 172

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
 Frame = -2

Query: 315 SCPEPASRLTLPGLIGEAXXXXXXXXXXXXXSGFS---IVVSLFLCRSCGSCRQ-ISPPR 148
           S P PA    +PGLI +                 +   ++VS  LC +C  CR+    PR
Sbjct: 23  SAPAPAGTTAIPGLIPDLVAGTPWPRWALIAGALAAGVLLVSCLLCAACCCCRRHRKKPR 82

Query: 147 QTQSL 133
             +S+
Sbjct: 83  DKESV 87


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,892,945
Number of Sequences: 219361
Number of extensions: 1084541
Number of successful extensions: 2767
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 2711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2756
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 1359926328
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result