Clone Information

BLAST Search Result

Clone Name	rbastl40d09
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	gb\|BT009144.1\| Triticum aestivum clone wl1n.pk0054.d8:fis, full ...	248	1e-62
2	gb\|AY603975.1\| Oryza sativa (indica cultivar-group) respiratory ...	224	2e-55
3	dbj\|AK121916.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	224	2e-55
4	dbj\|AK099714.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	224	2e-55
5	dbj\|AK065117.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	224	2e-55
6	dbj\|AK060770.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	224	2e-55
7	gb\|AY107147.1\| Zea mays PCO125081 mRNA sequence	202	6e-49
8	dbj\|AP008207.1\| Oryza sativa (japonica cultivar-group) genomic D...	137	3e-29
9	dbj\|AP003444.4\| Oryza sativa (japonica cultivar-group) genomic D...	137	3e-29
10	dbj\|AP003275.2\| Oryza sativa (japonica cultivar-group) genomic D...	137	3e-29
11	gb\|BT009119.1\| Triticum aestivum clone wl1n.pk0005.c8:fis, full ...	52	0.001
12	ref\|NM_202070.1\| Arabidopsis thaliana ATRBOHB; calcium ion bindi...	48	0.022
13	ref\|NM_100780.3\| Arabidopsis thaliana ATRBOHB; calcium ion bindi...	48	0.022
14	emb\|BX816700.1\|CNS0ADX6 Arabidopsis thaliana Full-length cDNA Co...	48	0.022
15	gb\|BT005716.1\| Arabidopsis thaliana clone RAFL14-97-K04 (R20129)...	48	0.022
16	gb\|BT009400.1\| Triticum aestivum clone wlm96.pk044.g9:fis, full ...	46	0.087
17	emb\|BX901971.15\| Zebrafish DNA sequence from clone DKEY-256M21 i...	44	0.35
18	ref\|XM_955172.1\| Neurospora crassa OR74A hypothetical protein (N...	42	1.4
19	ref\|XM_327389.1\| Neurospora crassa OR74A hypothetical protein (N...	42	1.4
20	gb\|AC183550.3\| Pan troglodytes BAC clone CH251-48C10 from chromo...	42	1.4
21	ref\|XM_720557.1\| Plasmodium yoelii yoelii str. 17XNL hypothetica...	42	1.4
22	gb\|AC146575.3\| Medicago truncatula clone mth2-145m4, complete se...	42	1.4
23	gb\|AC006777.1\| Caenorhabditis elegans cosmid Y46H3D, complete se...	40	5.4
24	gb\|BC083263.1\| Danio rerio zgc:101745, mRNA (cDNA clone MGC:1017...	40	5.4
25	gb\|AC136009.4\| Oryza sativa (japonica cultivar-group) chromosome...	40	5.4
26	gb\|AC150202.2\| Oryza sativa (japonica cultivar-group) chromosome...	40	5.4
27	gb\|CP000061.1\| Aster yellows witches'-broom phytoplasma AYWB, co...	40	5.4
28	gb\|AC146451.3\| Pan troglodytes BAC clone RP43-1L21 from 7, compl...	40	5.4
29	emb\|CR381560.8\| Zebrafish DNA sequence from clone CH211-172L8 in...	40	5.4
30	gb\|AC004020.1\|HUAC004020 Homo sapiens Chromosome 16 BAC clone CI...	40	5.4
31	gb\|AC141112.7\| Medicago truncatula clone mth2-15m12, complete se...	40	5.4
32	gb\|AC117452.2\| Homo sapiens 3 BAC RP11-341J3 (Roswell Park Cance...	40	5.4
33	gb\|AC026745.8\| Homo sapiens chromosome 5 clone RP11-245L6, compl...	40	5.4
34	gb\|AC119729.5\| Homo sapiens 3 BAC RP11-36I16 (Roswell Park Cance...	40	5.4
35	gb\|DQ378286.1\| Drosophila virilis strain Tucson 15010-1001.10 fo...	40	5.4
36	gb\|AC116339.2\| Homo sapiens chromosome 5 clone RP11-1006G2, comp...	40	5.4
37	gb\|AC067743.10\| Homo sapiens chromosome 10 clone RP11-441P16, co...	40	5.4
38	gb\|AC093829.2\| Homo sapiens BAC clone RP11-401E5 from 4, complet...	40	5.4
39	gb\|AC008835.6\| Homo sapiens chromosome 5 clone CTD-2148E3, compl...	40	5.4
40	gb\|AE006470.1\| Chlorobium tepidum TLS, complete genome	40	5.4
41	dbj\|AP008217.1\| Oryza sativa (japonica cultivar-group) genomic D...	40	5.4
42	gb\|AC012307.8\| Homo sapiens BAC clone RP11-574O17 from 2, comple...	40	5.4
43	ref\|NM_001006061.1\| Danio rerio zgc:101745 (zgc:101745), mRNA	40	5.4
44	gb\|AC012157.21\| Homo sapiens 12 BAC RP11-493P1 (Roswell Park Can...	40	5.4
45	gb\|AC007912.6\|AC007912 Homo sapiens chromosome , clone RP11-8A1,...	40	5.4
46	gb\|AC154771.2\| Mus musculus BAC clone RP24-448F8 from 13, comple...	40	5.4
47	gb\|DP000010.1\| Oryza sativa (japonica cultivar-group) chromosome...	40	5.4
48	dbj\|AP006656.1\| Lotus japonicus genomic DNA, chromosome 1, clone...	40	5.4

>gb|BT009144.1| Triticum aestivum clone wl1n.pk0054.d8:fis, full insert mRNA
           sequence
          Length = 876

 Score =  248 bits (125), Expect = 1e-62
 Identities = 251/293 (85%)
 Strand = Plus / Minus

                                                                       
Query: 111 tagaagttctccttgtgaaactcaaactttgtgtttgtcttgggggtgaaatctgccgac 170
           ||||||||||||||||| ||||||||||||||||| |||||| ||||||| ||||| |||
Sbjct: 573 tagaagttctccttgtggaactcaaactttgtgttcgtcttgtgggtgaagtctgctgac 514

                                                                       
Query: 171 aactgccgcagctgcggcacaagaacaggctcaccacaatagaaaaccccgacacgctga 230
            ||||||| ||||| |||||||| ||||||||||| || |||||||| || || || || 
Sbjct: 513 cactgccgtagctgtggcacaaggacaggctcaccgcagtagaaaactccaacgcgttgg 454

                                                                       
Query: 231 ttctcatggttgaccgcgacacgcttgaagacgcttcgccaattaggccgggcaaagtga 290
           ||||||||||| || || ||| | |||||||||||||||||||| || || || ||||| 
Sbjct: 453 ttctcatggttcactgcaacatgtttgaagacgcttcgccaattgggacgcgcgaagtgc 394

                                                                       
Query: 291 gtcttgacgctggttccggacaagatgtcaactcccttctttgcatgctggagttcttga 350
           |||||||| || ||||| ||||||||||| || || ||||| ||||||||||| ||||| 
Sbjct: 393 gtcttgacactagttccagacaagatgtcgacccctttcttcgcatgctggagctcttgg 334

                                                                
Query: 351 agcatgacaatgagtgcggaacgagcatcgccctcttgatacacactcgagca 403
           ||||||||||||||||| ||||| ||||| || || |  ||||||||||||||
Sbjct: 333 agcatgacaatgagtgcagaacgtgcatccccttcctcgtacacactcgagca 281

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>gb|AY603975.1| Oryza sativa (indica cultivar-group) respiratory burst oxidase
            protein B (rbohB) mRNA, complete cds
          Length = 3334

 Score =  224 bits (113), Expect = 2e-55
 Identities = 248/293 (84%)
 Strand = Plus / Minus

                                                                        
Query: 111  tagaagttctccttgtgaaactcaaactttgtgtttgtcttgggggtgaaatctgccgac 170
            ||||||||||||||||| || |||||  |||||||||||||| ||||||||||||| |||
Sbjct: 3012 tagaagttctccttgtggaaatcaaatcttgtgtttgtcttgtgggtgaaatctgctgac 2953

                                                                        
Query: 171  aactgccgcagctgcggcacaagaacaggctcaccacaatagaaaaccccgacacgctga 230
            |||||||  || || || || || |||||||||||||| ||||| || ||||| ||||| 
Sbjct: 2952 aactgccttagttggggaaccagcacaggctcaccacagtagaacacaccgacgcgctgg 2893

                                                                        
Query: 231  ttctcatggttgaccgcgacacgcttgaagacgcttcgccaattaggccgggcaaagtga 290
            ||||||||| ||||||| ||   |||||||||||||||||||||||| || || || || 
Sbjct: 2892 ttctcatggctgaccgcaaccttcttgaagacgcttcgccaattaggtcgtgcgaaatgg 2833

                                                                        
Query: 291  gtcttgacgctggttccggacaagatgtcaactcccttctttgcatgctggagttcttga 350
            ||||| || || ||||| |||||||| || || |||||||| |||||||| |||||||| 
Sbjct: 2832 gtcttcacactagttcccgacaagatatcgacgcccttcttcgcatgctgaagttcttgg 2773

                                                                 
Query: 351  agcatgacaatgagtgcggaacgagcatcgccctcttgatacacactcgagca 403
            |||||||||||||| || |||||||||||||| || || ||||| || |||||
Sbjct: 2772 agcatgacaatgagagcagaacgagcatcgccttcctggtacacgcttgagca 2720

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>dbj|AK121916.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106C16, full
            insert sequence
          Length = 3255

 Score =  224 bits (113), Expect = 2e-55
 Identities = 248/293 (84%)
 Strand = Plus / Minus

                                                                        
Query: 111  tagaagttctccttgtgaaactcaaactttgtgtttgtcttgggggtgaaatctgccgac 170
            ||||||||||||||||| || |||||  |||||||||||||| ||||||||||||| |||
Sbjct: 3085 tagaagttctccttgtggaaatcaaatcttgtgtttgtcttgtgggtgaaatctgctgac 3026

                                                                        
Query: 171  aactgccgcagctgcggcacaagaacaggctcaccacaatagaaaaccccgacacgctga 230
            |||||||  || || || || || |||||||||||||| ||||| || ||||| ||||| 
Sbjct: 3025 aactgccttagttggggaaccagcacaggctcaccacagtagaacacaccgacgcgctgg 2966

                                                                        
Query: 231  ttctcatggttgaccgcgacacgcttgaagacgcttcgccaattaggccgggcaaagtga 290
            ||||||||| ||||||| ||   |||||||||||||||||||||||| || || || || 
Sbjct: 2965 ttctcatggctgaccgcaaccttcttgaagacgcttcgccaattaggtcgtgcgaaatgg 2906

                                                                        
Query: 291  gtcttgacgctggttccggacaagatgtcaactcccttctttgcatgctggagttcttga 350
            ||||| || || ||||| |||||||| || || |||||||| |||||||| |||||||| 
Sbjct: 2905 gtcttcacactagttcccgacaagatatcgacgcccttcttcgcatgctgaagttcttgg 2846

                                                                 
Query: 351  agcatgacaatgagtgcggaacgagcatcgccctcttgatacacactcgagca 403
            |||||||||||||| || |||||||||||||| || || ||||| || |||||
Sbjct: 2845 agcatgacaatgagagcagaacgagcatcgccttcctggtacacgcttgagca 2793

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>dbj|AK099714.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013084G19, full
            insert sequence
          Length = 3731

 Score =  224 bits (113), Expect = 2e-55
 Identities = 248/293 (84%)
 Strand = Plus / Minus

                                                                        
Query: 111  tagaagttctccttgtgaaactcaaactttgtgtttgtcttgggggtgaaatctgccgac 170
            ||||||||||||||||| || |||||  |||||||||||||| ||||||||||||| |||
Sbjct: 3604 tagaagttctccttgtggaaatcaaatcttgtgtttgtcttgtgggtgaaatctgctgac 3545

                                                                        
Query: 171  aactgccgcagctgcggcacaagaacaggctcaccacaatagaaaaccccgacacgctga 230
            |||||||  || || || || || |||||||||||||| ||||| || ||||| ||||| 
Sbjct: 3544 aactgccttagttggggaaccagcacaggctcaccacagtagaacacaccgacgcgctgg 3485

                                                                        
Query: 231  ttctcatggttgaccgcgacacgcttgaagacgcttcgccaattaggccgggcaaagtga 290
            ||||||||| ||||||| ||   |||||||||||||||||||||||| || || || || 
Sbjct: 3484 ttctcatggctgaccgcaaccttcttgaagacgcttcgccaattaggtcgtgcgaaatgg 3425

                                                                        
Query: 291  gtcttgacgctggttccggacaagatgtcaactcccttctttgcatgctggagttcttga 350
            ||||| || || ||||| |||||||| || || |||||||| |||||||| |||||||| 
Sbjct: 3424 gtcttcacactagttcccgacaagatatcgacgcccttcttcgcatgctgaagttcttgg 3365

                                                                 
Query: 351  agcatgacaatgagtgcggaacgagcatcgccctcttgatacacactcgagca 403
            |||||||||||||| || |||||||||||||| || || ||||| || |||||
Sbjct: 3364 agcatgacaatgagagcagaacgagcatcgccttcctggtacacgcttgagca 3312

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>dbj|AK065117.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001O12, full
            insert sequence
          Length = 3198

 Score =  224 bits (113), Expect = 2e-55
 Identities = 248/293 (84%)
 Strand = Plus / Minus

                                                                        
Query: 111  tagaagttctccttgtgaaactcaaactttgtgtttgtcttgggggtgaaatctgccgac 170
            ||||||||||||||||| || |||||  |||||||||||||| ||||||||||||| |||
Sbjct: 3088 tagaagttctccttgtggaaatcaaatcttgtgtttgtcttgtgggtgaaatctgctgac 3029

                                                                        
Query: 171  aactgccgcagctgcggcacaagaacaggctcaccacaatagaaaaccccgacacgctga 230
            |||||||  || || || || || |||||||||||||| ||||| || ||||| ||||| 
Sbjct: 3028 aactgccttagttggggaaccagcacaggctcaccacagtagaacacaccgacgcgctgg 2969

                                                                        
Query: 231  ttctcatggttgaccgcgacacgcttgaagacgcttcgccaattaggccgggcaaagtga 290
            ||||||||| ||||||| ||   |||||||||||||||||||||||| || || || || 
Sbjct: 2968 ttctcatggctgaccgcaaccttcttgaagacgcttcgccaattaggtcgtgcgaaatgg 2909

                                                                        
Query: 291  gtcttgacgctggttccggacaagatgtcaactcccttctttgcatgctggagttcttga 350
            ||||| || || ||||| |||||||| || || |||||||| |||||||| |||||||| 
Sbjct: 2908 gtcttcacactagttcccgacaagatatcgacgcccttcttcgcatgctgaagttcttgg 2849

                                                                 
Query: 351  agcatgacaatgagtgcggaacgagcatcgccctcttgatacacactcgagca 403
            |||||||||||||| || |||||||||||||| || || ||||| || |||||
Sbjct: 2848 agcatgacaatgagagcagaacgagcatcgccttcctggtacacgcttgagca 2796

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>dbj|AK060770.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-B03, full
            insert sequence
          Length = 2978

 Score =  224 bits (113), Expect = 2e-55
 Identities = 248/293 (84%)
 Strand = Plus / Minus

                                                                        
Query: 111  tagaagttctccttgtgaaactcaaactttgtgtttgtcttgggggtgaaatctgccgac 170
            ||||||||||||||||| || |||||  |||||||||||||| ||||||||||||| |||
Sbjct: 2725 tagaagttctccttgtggaaatcaaatcttgtgtttgtcttgtgggtgaaatctgctgac 2666

                                                                        
Query: 171  aactgccgcagctgcggcacaagaacaggctcaccacaatagaaaaccccgacacgctga 230
            |||||||  || || || || || |||||||||||||| ||||| || ||||| ||||| 
Sbjct: 2665 aactgccttagttggggaaccagcacaggctcaccacagtagaacacaccgacgcgctgg 2606

                                                                        
Query: 231  ttctcatggttgaccgcgacacgcttgaagacgcttcgccaattaggccgggcaaagtga 290
            ||||||||| ||||||| ||   |||||||||||||||||||||||| || || || || 
Sbjct: 2605 ttctcatggctgaccgcaaccttcttgaagacgcttcgccaattaggtcgtgcgaaatgg 2546

                                                                        
Query: 291  gtcttgacgctggttccggacaagatgtcaactcccttctttgcatgctggagttcttga 350
            ||||| || || ||||| |||||||| || || |||||||| |||||||| |||||||| 
Sbjct: 2545 gtcttcacactagttcccgacaagatatcgacgcccttcttcgcatgctgaagttcttgg 2486

                                                                 
Query: 351  agcatgacaatgagtgcggaacgagcatcgccctcttgatacacactcgagca 403
            |||||||||||||| || |||||||||||||| || || ||||| || |||||
Sbjct: 2485 agcatgacaatgagagcagaacgagcatcgccttcctggtacacgcttgagca 2433

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>gb|AY107147.1| Zea mays PCO125081 mRNA sequence
          Length = 938

 Score =  202 bits (102), Expect = 6e-49
 Identities = 243/290 (83%)
 Strand = Plus / Minus

                                                                       
Query: 114 aagttctccttgtgaaactcaaactttgtgtttgtcttgggggtgaaatctgccgacaac 173
           |||||||||||||| ||||| ||||| || ||||||||| ||||||| || || |||| |
Sbjct: 641 aagttctccttgtggaactcgaacttagtatttgtcttgtgggtgaagtccgctgacagc 582

                                                                       
Query: 174 tgccgcagctgcggcacaagaacaggctcaccacaatagaaaaccccgacacgctgattc 233
           ||||| ||||| |||||||| || ||||||||||| |||||||| ||||  || || |||
Sbjct: 581 tgccgtagctgtggcacaaggacgggctcaccacagtagaaaactccgatgcgttggttc 522

                                                                       
Query: 234 tcatggttgaccgcgacacgcttgaagacgcttcgccaattaggccgggcaaagtgagtc 293
           || ||||| || || ||| | |||||||||||||||||||| ||||| ||||| || |||
Sbjct: 521 tcgtggttcactgcaacatgtttgaagacgcttcgccaattcggccgtgcaaaatgcgtc 462

                                                                       
Query: 294 ttgacgctggttccggacaagatgtcaactcccttctttgcatgctggagttcttgaagc 353
           ||||| || ||||| ||||||||||| ||||||||||| || |||||||| || || |||
Sbjct: 461 ttgacactagttccagacaagatgtcgactcccttcttcgcgtgctggagctcctggagc 402

                                                             
Query: 354 atgacaatgagtgcggaacgagcatcgccctcttgatacacactcgagca 403
           ||||||||||| || |||||  |||| || || || | ||||||||||||
Sbjct: 401 atgacaatgagggcagaacgtacatccccttcctggtgcacactcgagca 352

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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  137 bits (69), Expect = 3e-29
 Identities = 156/185 (84%)
 Strand = Plus / Plus

                                                                            
Query: 219      ccgacacgctgattctcatggttgaccgcgacacgcttgaagacgcttcgccaattaggc 278
                ||||| ||||| ||||||||| ||||||| ||   |||||||||||||||||||||||| 
Sbjct: 14604691 ccgacgcgctggttctcatggctgaccgcaaccttcttgaagacgcttcgccaattaggt 14604750

                                                                            
Query: 279      cgggcaaagtgagtcttgacgctggttccggacaagatgtcaactcccttctttgcatgc 338
                || || || || ||||| || || ||||| |||||||| || || |||||||| ||||||
Sbjct: 14604751 cgtgcgaaatgggtcttcacactagttcccgacaagatatcgacgcccttcttcgcatgc 14604810

                                                                            
Query: 339      tggagttcttgaagcatgacaatgagtgcggaacgagcatcgccctcttgatacacactc 398
                || |||||||| |||||||||||||| || |||||||||||||| || || ||||| || 
Sbjct: 14604811 tgaagttcttggagcatgacaatgagagcagaacgagcatcgccttcctggtacacgctt 14604870

                     
Query: 399      gagca 403
                |||||
Sbjct: 14604871 gagca 14604875



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 90/104 (86%)
 Strand = Plus / Plus

                                                                            
Query: 111      tagaagttctccttgtgaaactcaaactttgtgtttgtcttgggggtgaaatctgccgac 170
                ||||||||||||||||| || |||||  |||||||||||||| ||||||||||||| |||
Sbjct: 14604500 tagaagttctccttgtggaaatcaaatcttgtgtttgtcttgtgggtgaaatctgctgac 14604559

                                                            
Query: 171      aactgccgcagctgcggcacaagaacaggctcaccacaatagaa 214
                |||||||  || || || || || |||||||||||||| |||||
Sbjct: 14604560 aactgccttagttggggaaccagcacaggctcaccacagtagaa 14604603

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>dbj|AP003444.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1164G11
          Length = 142699

 Score =  137 bits (69), Expect = 3e-29
 Identities = 156/185 (84%)
 Strand = Plus / Plus

                                                                         
Query: 219   ccgacacgctgattctcatggttgaccgcgacacgcttgaagacgcttcgccaattaggc 278
             ||||| ||||| ||||||||| ||||||| ||   |||||||||||||||||||||||| 
Sbjct: 86068 ccgacgcgctggttctcatggctgaccgcaaccttcttgaagacgcttcgccaattaggt 86127

                                                                         
Query: 279   cgggcaaagtgagtcttgacgctggttccggacaagatgtcaactcccttctttgcatgc 338
             || || || || ||||| || || ||||| |||||||| || || |||||||| ||||||
Sbjct: 86128 cgtgcgaaatgggtcttcacactagttcccgacaagatatcgacgcccttcttcgcatgc 86187

                                                                         
Query: 339   tggagttcttgaagcatgacaatgagtgcggaacgagcatcgccctcttgatacacactc 398
             || |||||||| |||||||||||||| || |||||||||||||| || || ||||| || 
Sbjct: 86188 tgaagttcttggagcatgacaatgagagcagaacgagcatcgccttcctggtacacgctt 86247

                  
Query: 399   gagca 403
             |||||
Sbjct: 86248 gagca 86252



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 90/104 (86%)
 Strand = Plus / Plus

                                                                         
Query: 111   tagaagttctccttgtgaaactcaaactttgtgtttgtcttgggggtgaaatctgccgac 170
             ||||||||||||||||| || |||||  |||||||||||||| ||||||||||||| |||
Sbjct: 85877 tagaagttctccttgtggaaatcaaatcttgtgtttgtcttgtgggtgaaatctgctgac 85936

                                                         
Query: 171   aactgccgcagctgcggcacaagaacaggctcaccacaatagaa 214
             |||||||  || || || || || |||||||||||||| |||||
Sbjct: 85937 aactgccttagttggggaaccagcacaggctcaccacagtagaa 85980

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>dbj|AP003275.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0514H03
          Length = 167230

 Score =  137 bits (69), Expect = 3e-29
 Identities = 156/185 (84%)
 Strand = Plus / Plus

                                                                          
Query: 219    ccgacacgctgattctcatggttgaccgcgacacgcttgaagacgcttcgccaattaggc 278
              ||||| ||||| ||||||||| ||||||| ||   |||||||||||||||||||||||| 
Sbjct: 164004 ccgacgcgctggttctcatggctgaccgcaaccttcttgaagacgcttcgccaattaggt 164063

                                                                          
Query: 279    cgggcaaagtgagtcttgacgctggttccggacaagatgtcaactcccttctttgcatgc 338
              || || || || ||||| || || ||||| |||||||| || || |||||||| ||||||
Sbjct: 164064 cgtgcgaaatgggtcttcacactagttcccgacaagatatcgacgcccttcttcgcatgc 164123

                                                                          
Query: 339    tggagttcttgaagcatgacaatgagtgcggaacgagcatcgccctcttgatacacactc 398
              || |||||||| |||||||||||||| || |||||||||||||| || || ||||| || 
Sbjct: 164124 tgaagttcttggagcatgacaatgagagcagaacgagcatcgccttcctggtacacgctt 164183

                   
Query: 399    gagca 403
              |||||
Sbjct: 164184 gagca 164188



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 90/104 (86%)
 Strand = Plus / Plus

                                                                          
Query: 111    tagaagttctccttgtgaaactcaaactttgtgtttgtcttgggggtgaaatctgccgac 170
              ||||||||||||||||| || |||||  |||||||||||||| ||||||||||||| |||
Sbjct: 163813 tagaagttctccttgtggaaatcaaatcttgtgtttgtcttgtgggtgaaatctgctgac 163872

                                                          
Query: 171    aactgccgcagctgcggcacaagaacaggctcaccacaatagaa 214
              |||||||  || || || || || |||||||||||||| |||||
Sbjct: 163873 aactgccttagttggggaaccagcacaggctcaccacagtagaa 163916

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>gb|BT009119.1| Triticum aestivum clone wl1n.pk0005.c8:fis, full insert mRNA
           sequence
          Length = 543

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 110 ctagaagttctccttgtgaaactcaaactttgtgtttgtctt 151
           |||||||||||||||||| ||||| ||||| ||||| |||||
Sbjct: 377 ctagaagttctccttgtggaactcgaacttggtgttggtctt 336

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>ref|NM_202070.1| Arabidopsis thaliana ATRBOHB; calcium ion binding / oxidoreductase
            AT1G09090 (ATRBOHB) transcript variant AT1G09090.2 mRNA,
            complete cds
          Length = 2627

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 60/72 (83%)
 Strand = Plus / Minus

                                                                        
Query: 203  accacaatagaaaaccccgacacgctgattctcatggttgaccgcgacacgcttgaagac 262
            |||||| ||||||||||| || || |||||  | |||||||| |||||  ||||||||||
Sbjct: 2443 accacagtagaaaaccccaactcgttgattgacgtggttgactgcgacgtgcttgaagac 2384

                        
Query: 263  gcttcgccaatt 274
             || ||||||||
Sbjct: 2383 actacgccaatt 2372

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>ref|NM_100780.3| Arabidopsis thaliana ATRBOHB; calcium ion binding / oxidoreductase
            AT1G09090 (ATRBOHB) transcript variant AT1G09090.1 mRNA,
            complete cds
          Length = 2701

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 60/72 (83%)
 Strand = Plus / Minus

                                                                        
Query: 203  accacaatagaaaaccccgacacgctgattctcatggttgaccgcgacacgcttgaagac 262
            |||||| ||||||||||| || || |||||  | |||||||| |||||  ||||||||||
Sbjct: 2517 accacagtagaaaaccccaactcgttgattgacgtggttgactgcgacgtgcttgaagac 2458

                        
Query: 263  gcttcgccaatt 274
             || ||||||||
Sbjct: 2457 actacgccaatt 2446

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>emb|BX816700.1|CNS0ADX6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH63ZH03 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2590

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 60/72 (83%)
 Strand = Plus / Minus

                                                                        
Query: 203  accacaatagaaaaccccgacacgctgattctcatggttgaccgcgacacgcttgaagac 262
            |||||| ||||||||||| || || |||||  | |||||||| |||||  ||||||||||
Sbjct: 2426 accacagtagaaaaccccaactcgttgattgacgtggttgactgcgacgtgcttgaagac 2367

                        
Query: 263  gcttcgccaatt 274
             || ||||||||
Sbjct: 2366 actacgccaatt 2355

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>gb|BT005716.1| Arabidopsis thaliana clone RAFL14-97-K04 (R20129) putative
            respiratory burst oxidase protein B (At1g09090) mRNA,
            complete cds
          Length = 2721

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 60/72 (83%)
 Strand = Plus / Minus

                                                                        
Query: 203  accacaatagaaaaccccgacacgctgattctcatggttgaccgcgacacgcttgaagac 262
            |||||| ||||||||||| || || |||||  | |||||||| |||||  ||||||||||
Sbjct: 2518 accacagtagaaaaccccaactcgttgattgacgtggttgactgcgacgtgcttgaagac 2459

                        
Query: 263  gcttcgccaatt 274
             || ||||||||
Sbjct: 2458 actacgccaatt 2447

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>gb|BT009400.1| Triticum aestivum clone wlm96.pk044.g9:fis, full insert mRNA sequence
          Length = 1993

 Score = 46.1 bits (23), Expect = 0.087
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 117  ttctccttgtgaaactcaaactttgtgtttgtctt 151
            ||||||||||| ||||| || ||||||||||||||
Sbjct: 1750 ttctccttgtggaactcgaattttgtgtttgtctt 1716

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>emb|BX901971.15| Zebrafish DNA sequence from clone DKEY-256M21 in linkage group 21,
             complete sequence
          Length = 156578

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 376   catcgccctcttgatacacact 397
             ||||||||||||||||||||||
Sbjct: 28906 catcgccctcttgatacacact 28885

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>ref|XM_955172.1| Neurospora crassa OR74A hypothetical protein (NCU07104.1) partial
           mRNA
          Length = 648

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 162 tctgccgacaactgccgcagc 182
           |||||||||||||||||||||
Sbjct: 346 tctgccgacaactgccgcagc 366

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>ref|XM_327389.1| Neurospora crassa OR74A hypothetical protein (NCU07104.1) partial
           mRNA
          Length = 648

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 162 tctgccgacaactgccgcagc 182
           |||||||||||||||||||||
Sbjct: 346 tctgccgacaactgccgcagc 366

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>gb|AC183550.3| Pan troglodytes BAC clone CH251-48C10 from chromosome 7, complete
             sequence
          Length = 163417

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 16    cattttatttcccacctttac 36
             |||||||||||||||||||||
Sbjct: 52451 cattttatttcccacctttac 52431

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>ref|XM_720557.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY05218)
           partial mRNA
          Length = 1872

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 31  ctttacaaaataataatacaa 51
           |||||||||||||||||||||
Sbjct: 449 ctttacaaaataataatacaa 469

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>gb|AC146575.3| Medicago truncatula clone mth2-145m4, complete sequence
          Length = 117113

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 32    tttacaaaataataatacaac 52
             |||||||||||||||||||||
Sbjct: 35316 tttacaaaataataatacaac 35296

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>gb|AC006777.1| Caenorhabditis elegans cosmid Y46H3D, complete sequence
          Length = 27089

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     ggcaaaaccactcccatttt 21
             ||||||||||||||||||||
Sbjct: 19971 ggcaaaaccactcccatttt 19990

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>gb|BC083263.1| Danio rerio zgc:101745, mRNA (cDNA clone MGC:101745 IMAGE:7229185),
           complete cds
          Length = 1154

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 351 agcatgacaatgagtgcgga 370
           ||||||||||||||||||||
Sbjct: 451 agcatgacaatgagtgcgga 470

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>gb|AC136009.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0025K21,
              complete sequence
          Length = 146539

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 17     attttatttcccacctttac 36
              ||||||||||||||||||||
Sbjct: 130982 attttatttcccacctttac 130963

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>gb|AC150202.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone B1024A10,
              complete sequence
          Length = 157609

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 17     attttatttcccacctttac 36
              ||||||||||||||||||||
Sbjct: 156975 attttatttcccacctttac 156956

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>gb|CP000061.1| Aster yellows witches'-broom phytoplasma AYWB, complete genome
          Length = 706569

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 32     tttacaaaataataatacaa 51
              ||||||||||||||||||||
Sbjct: 534673 tttacaaaataataatacaa 534654

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>gb|AC146451.3| Pan troglodytes BAC clone RP43-1L21 from 7, complete sequence
          Length = 161524

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 45   aatacaacccatacaattca 64
            ||||||||||||||||||||
Sbjct: 8205 aatacaacccatacaattca 8224

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>emb|CR381560.8| Zebrafish DNA sequence from clone CH211-172L8 in linkage group 25,
              complete sequence
          Length = 145001

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 351    agcatgacaatgagtgcgga 370
              ||||||||||||||||||||
Sbjct: 123756 agcatgacaatgagtgcgga 123775

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>gb|AC004020.1|HUAC004020 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-319E8, complete sequence
          Length = 153773

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 25     tcccacctttacaaaataataata 48
              |||||||| |||||||||||||||
Sbjct: 143029 tcccacctatacaaaataataata 143052

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>gb|AC141112.7| Medicago truncatula clone mth2-15m12, complete sequence
          Length = 135248

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 70    tgaagcatggcatagacata 89
             ||||||||||||||||||||
Sbjct: 73693 tgaagcatggcatagacata 73674

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>gb|AC117452.2| Homo sapiens 3 BAC RP11-341J3 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 193285

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     aattcacctgatgaagcatg 78
              ||||||||||||||||||||
Sbjct: 142279 aattcacctgatgaagcatg 142260

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>gb|AC026745.8| Homo sapiens chromosome 5 clone RP11-245L6, complete sequence
          Length = 128963

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 186   ggcacaagaacaggctcaccacaa 209
             |||||||||| |||||||||||||
Sbjct: 70355 ggcacaagaaaaggctcaccacaa 70378

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>gb|AC119729.5| Homo sapiens 3 BAC RP11-36I16 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 125847

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 59   aattcacctgatgaagcatg 78
            ||||||||||||||||||||
Sbjct: 1357 aattcacctgatgaagcatg 1338

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>gb|DQ378286.1| Drosophila virilis strain Tucson 15010-1001.10 fosmids 22L1 and
            42E12, complete sequence
          Length = 68774

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 213  aaaaccccgacacgctgatt 232
            ||||||||||||||||||||
Sbjct: 2488 aaaaccccgacacgctgatt 2507

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>gb|AC116339.2| Homo sapiens chromosome 5 clone RP11-1006G2, complete sequence
          Length = 74705

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    aatacaacccatacaattca 64
             ||||||||||||||||||||
Sbjct: 18762 aatacaacccatacaattca 18743

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>gb|AC067743.10| Homo sapiens chromosome 10 clone RP11-441P16, complete sequence
          Length = 177795

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 329   ctttgcatgctggagttctt 348
             ||||||||||||||||||||
Sbjct: 79063 ctttgcatgctggagttctt 79082

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>gb|AC093829.2| Homo sapiens BAC clone RP11-401E5 from 4, complete sequence
          Length = 169483

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 28     cacctttacaaaataataat 47
              ||||||||||||||||||||
Sbjct: 144467 cacctttacaaaataataat 144448

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>gb|AC008835.6| Homo sapiens chromosome 5 clone CTD-2148E3, complete sequence
          Length = 129046

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 45     aatacaacccatacaattca 64
              ||||||||||||||||||||
Sbjct: 116603 aatacaacccatacaattca 116584

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>gb|AE006470.1| Chlorobium tepidum TLS, complete genome
          Length = 2154946

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 243     accgcgacacgcttgaagac 262
               ||||||||||||||||||||
Sbjct: 1729469 accgcgacacgcttgaagac 1729450

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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 17       attttatttcccacctttac 36
                ||||||||||||||||||||
Sbjct: 17402200 attttatttcccacctttac 17402181

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>gb|AC012307.8| Homo sapiens BAC clone RP11-574O17 from 2, complete sequence
          Length = 145918

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 25     tcccacctttacaaaataataata 48
              |||||||| |||||||||||||||
Sbjct: 108062 tcccacctatacaaaataataata 108039

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>ref|NM_001006061.1| Danio rerio zgc:101745 (zgc:101745), mRNA
          Length = 1154

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 351 agcatgacaatgagtgcgga 370
           ||||||||||||||||||||
Sbjct: 451 agcatgacaatgagtgcgga 470

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>gb|AC012157.21| Homo sapiens 12 BAC RP11-493P1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 165833

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 137   ctttgtgtttgtcttggggg 156
             ||||||||||||||||||||
Sbjct: 81130 ctttgtgtttgtcttggggg 81111

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>gb|AC007912.6|AC007912 Homo sapiens chromosome , clone RP11-8A1, complete sequence
          Length = 171255

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   ctttgtgtttgtcttggggg 156
             ||||||||||||||||||||
Sbjct: 25642 ctttgtgtttgtcttggggg 25661

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>gb|AC154771.2| Mus musculus BAC clone RP24-448F8 from 13, complete sequence
          Length = 165376

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 86    catattcctatacaagctac 105
             ||||||||||||||||||||
Sbjct: 82871 catattcctatacaagctac 82852

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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 17       attttatttcccacctttac 36
                ||||||||||||||||||||
Sbjct: 17495910 attttatttcccacctttac 17495891

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>dbj|AP006656.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT05H03, TM0342a,
             complete sequence
          Length = 57652

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   tagaagttctccttgtgaaa 130
             ||||||||||||||||||||
Sbjct: 34235 tagaagttctccttgtgaaa 34216


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,991,288
Number of Sequences: 3902068
Number of extensions: 3991288
Number of successful extensions: 78691
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78519
Number of HSP's gapped (non-prelim): 172
length of query: 403
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 381
effective length of database: 17,147,199,772
effective search space: 6533083113132
effective search space used: 6533083113132
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result