>XYL1_ARATH (Q9S7Y7) Alpha-xylosidase precursor (EC 3.2.1.-)|
          Length = 915

 Score = 34.7 bits (78), Expect = 0.096
 Identities = 18/36 (50%), Positives = 23/36 (63%)
 Frame = -2

Query: 356 GEEDAVEGEKRGVTMEVGGLELPLGKSFTMTWNMHI 249
           G ED  E E + V +EV GLE+ +GK F M+W M I
Sbjct: 881 GLED--EEENKSVMVEVRGLEMLVGKDFNMSWKMGI 914

>YBIB_ECOLI (P30177) Hypothetical protein ybiB|
          Length = 320

 Score = 33.1 bits (74), Expect = 0.28
 Identities = 19/58 (32%), Positives = 25/58 (43%)
 Frame = -2

Query: 422 DATAVATSSPYFLAADAQVMHQGEEDAVEGEKRGVTMEVGGLELPLGKSFTMTWNMHI 249
           D T V T + + L      +H G+  A   E + V M VG    PL K   M W M +
Sbjct: 120 DPTRVLTETIFELMGITPTLHGGQAQAKLDEHQPVFMPVGAFCPPLEKQLAMRWRMGV 177

>TISD_HUMAN (P47974) Butyrate response factor 2 (TIS11D protein) (EGF-response|
           factor 2) (ERF-2)
          Length = 492

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +1

Query: 280 FPSGNSSPPTSIVTPLFSPSTASSSPWCITCASAA 384
           FPSG+  PP  + +PL   S  S +P   +C+SA+
Sbjct: 263 FPSGHHQPPGGLESPLLLDSPTSRTPPPPSCSSAS 297

>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)|
           (High molecular weight salivary mucin MG1) (Sublingual
           gland mucin)
          Length = 5703

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +1

Query: 13  NGRMQFHPPARLSFNG*IRVHKWCPRVTNPHTSYITDSSTMN 138
           N R  F  P  LS         WC R+T+P++++    S +N
Sbjct: 600 NARNSFEDPCSLSVENENYARHWCSRLTDPNSAFSRCHSIIN 641

>CB024_RAT (Q6P7B2) Protein C2orf24 homolog|
          Length = 408

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
 Frame = +1

Query: 214 AEANAARFSYASMCMFHVMVKLFPSGNSSPPTSIVTP--LFSPSTASSSPWCITCASA 381
           A  ++   + ASM + H  + L  S + SPP   + P  L  P   +  P C+T  S+
Sbjct: 238 AYVSSVALAVASMAVIHQSLGLSSSPSPSPPELTLVPKNLLQPCIPAPVPQCLTNVSS 295

>SLIT1_HUMAN (O75093) Slit homolog 1 protein precursor (Slit-1) (Multiple|
           epidermal growth factor-like domains 4)
          Length = 1534

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +3

Query: 225 CSSILLCFDVHVPCHGEALPQRQLQPANLHRHAPLLALHGVLFSLVH 365
           C ++  C    V CHG  L   Q  P N+ R+   L L+G   + +H
Sbjct: 34  CPALCTCTGTTVDCHGTGL---QAIPKNIPRNTERLELNGNNITRIH 77

>VATG1_HUMAN (O75348) Vacuolar ATP synthase subunit G 1 (EC 3.6.3.14) (V-ATPase|
           G subunit 1) (Vacuolar proton pump G subunit 1)
           (V-ATPase 13 kDa subunit 1) (Vacuolar ATP synthase
           subunit M16)
          Length = 117

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 17/61 (27%), Positives = 34/61 (55%)
 Frame = +3

Query: 51  LQWVNQSSQMVSEGNQPPHKLHNRLKHDELLFKLYKFKLDTTTTSRTKKAHADGSRGKCS 230
           LQ   ++++ VSE  +  ++   + K +E   ++ +++L      + K+A A GSRG CS
Sbjct: 11  LQAEKRAAEKVSEARKRKNRRLKQAK-EEAQAEIEQYRLQREKEFKAKEAAALGSRGSCS 69

Query: 231 S 233
           +
Sbjct: 70  T 70

>SLIT1_RAT (O88279) Slit homolog 1 protein precursor (Slit-1) (Multiple|
           epidermal growth factor-like domains 4)
          Length = 1531

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +3

Query: 225 CSSILLCFDVHVPCHGEALPQRQLQPANLHRHAPLLALHGVLFSLVH 365
           C ++  C    V CHG  L   Q  P N+ R+   L L+G   + +H
Sbjct: 34  CPALCTCTGTTVDCHGTGL---QAIPKNIPRNTERLELNGNNITRIH 77

>SLIT1_MOUSE (Q80TR4) Slit homolog 1 protein precursor (Slit-1)|
          Length = 1531

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +3

Query: 225 CSSILLCFDVHVPCHGEALPQRQLQPANLHRHAPLLALHGVLFSLVH 365
           C ++  C    V CHG  L   Q  P N+ R+   L L+G   + +H
Sbjct: 34  CPALCTCTGTTVDCHGTGL---QAIPKNIPRNTERLELNGNNITRIH 77

>TCRG1_HUMAN (O14776) Transcription elongation regulator 1 (TATA box-binding|
           protein-associated factor 2S) (Transcription factor
           CA150)
          Length = 1098

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
 Frame = +1

Query: 205 QTEAEANAARFSYASM-CMFHVMVKLFPSGNSSPPTSIVTPLFSPSTASSSPWCITCASA 381
           Q +A+A A   + A +       V+    G S+P TS   P  S ST+SS+P   T  + 
Sbjct: 228 QAQAQAQAQAQAQAQVQAQVQAQVQAQAVGASTPTTSSPAPAVSTSTSSSTPSSTTSTTT 287

Query: 382 AKK*GLDVATAVASS 426
                   AT+VA +
Sbjct: 288 -------TATSVAQT 295

>OTX2_XENLA (Q91813) Homeobox protein OTX2 (XOTX2) (Orthodenticle 2)|
           (Orthodenticle-A-like protein)
          Length = 288

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +1

Query: 286 SGNSSPPTSIVTPLFSPSTASSSPW 360
           SG  SPP+S   P+ S STA  S W
Sbjct: 128 SGQFSPPSSTSVPVISSSTAPVSIW 152


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,343,774
Number of Sequences: 219361
Number of extensions: 753661
Number of successful extensions: 3123
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3118
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)