ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl40d02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009089.1| Triticum aestivum clone wkm2c.pk0002.a3:fis, full... 424 e-116
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 94 4e-16
3gb|AC137073.2| Genomic sequence for Oryza sativa, Nipponbare str... 94 4e-16
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 94 4e-16
5dbj|AK071247.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 4e-16
6dbj|AK069084.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 4e-16
7dbj|AK059077.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 4e-16
8dbj|AK068938.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 2e-14
9gb|AY109428.1| Zea mays CL501_1 mRNA sequence 86 9e-14
10gb|AC073133.9| Homo sapiens BAC clone RP11-691F21 from 7, comple... 44 0.32
11dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
12dbj|AP004736.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
13dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
14emb|AL161554.2|ATCHRIV54 Arabidopsis thaliana DNA chromosome 4, ... 42 1.3
15emb|AL031187.1|ATT6K22 Arabidopsis thaliana DNA chromosome 4, BA... 42 1.3
16emb|AL807815.3| Mouse DNA sequence from clone RP23-207H16 on chr... 42 1.3
17gb|AC127314.4| Mus musculus BAC clone RP23-217N4 from chromosome... 40 5.0
18gb|AC129179.3| Mus musculus BAC clone RP23-240C24 from chromosom... 40 5.0
19emb|Z70306.1|CEC06G8 Caenorhabditis elegans Cosmid C06G8, comple... 40 5.0
20emb|CR381641.12| Zebrafish DNA sequence from clone DKEY-189N10 i... 40 5.0
21emb|AL160159.12| Human DNA sequence from clone RP11-71K7 on chro... 40 5.0
22emb|AL078462.9|HSJ159G19 Human DNA sequence from clone RP1-159G1... 40 5.0
23gb|AF517750.1| Mus musculus chromosome 18 NFS107 proviral integr... 40 5.0
24gb|AC068951.18| Oryza sativa chromosome 10 BAC OSJNBa0042E19 gen... 40 5.0
25emb|BX324007.16| Zebrafish DNA sequence from clone CH211-233C16 ... 40 5.0
26gb|AC079439.26| Mus musculus strain 129/Sv chromosome 2 clone ct... 40 5.0
27dbj|AK136716.1| Mus musculus adult male epididymis cDNA, RIKEN f... 40 5.0
28gb|AC120670.8| Rattus norvegicus 2 BAC CH230-23N23 (Children's H... 40 5.0
29gb|AC154501.2| Mus musculus BAC clone RP24-87F14 from chromosome... 40 5.0
30gb|AF298202.1| Dictyostelium discoideum putative transposon DDT-... 40 5.0
31tpg|BK001437.1| TPA: TPA_exp: Homo sapiens SULT6B1 (SULT6B1) gen... 40 5.0
32gb|AC017067.4|AC017067 Homo sapiens BAC clone RP11-370B11 from 9... 40 5.0
33dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
34gb|AC007899.3| Homo sapiens BAC clone RP11-531C11 from 2, comple... 40 5.0
35emb|BX901906.3| Mouse DNA sequence from clone RP23-328F9 on chro... 40 5.0
36gb|AC113458.10| Mus musculus chromosome 3, clone RP23-372O21, co... 40 5.0
37dbj|AK066946.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
38emb|BX248238.5| Zebrafish DNA sequence from clone CH211-169J21 i... 40 5.0
39emb|AL132668.4|CNS01DT9 Human chromosome 14 DNA sequence BAC R-5... 40 5.0
40gb|AC170734.3| Sorex araneus clone SA_Ba-257D3, complete sequence 40 5.0
41emb|BX004808.5| Zebrafish DNA sequence from clone CH211-51B23 in... 40 5.0
42gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.0
43emb|AL844146.2| Mouse DNA sequence from clone RP24-89J1 on chrom... 40 5.0 
>gb|BT009089.1| Triticum aestivum clone wkm2c.pk0002.a3:fis, full insert mRNA
           sequence
          Length = 774

 Score =  424 bits (214), Expect = e-116
 Identities = 306/335 (91%), Gaps = 5/335 (1%)
 Strand = Plus / Minus

                                                                       
Query: 47  gatatacaatttatgcggcacaaaatgtccaggatgagtatccctaga---aaattctga 103
           ||||||||||||||||||||||||||||||||| ||||||||||||||   |||||||||
Sbjct: 695 gatatacaatttatgcggcacaaaatgtccaggttgagtatccctagaggaaaattctga 636

                                                                       
Query: 104 aaccaagaaactaacagcttaaatacggtaaagtagaagtaacacaataacaacacaata 163
           ||||||||||||||||| ||||||||||| |  ||  ||| | |||||||||||||||||
Sbjct: 635 aaccaagaaactaacagtttaaatacggtgatctaatagttatacaataacaacacaata 576

                                                                       
Query: 164 caattcacactaacttccatgaaacagcacagctgt--atgctcataactgaataatttt 221
           ||||||||||||||||||||| ||||||||  ||||  ||||||||||| ||||||||||
Sbjct: 575 caattcacactaacttccatggaacagcacgcctgtgtatgctcataaccgaataatttt 516

                                                                       
Query: 222 gacggaatatccatccttaagttacccgtcacttacttgataagagactccatagcttca 281
           ||||||||| | ||| | ||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 515 gacggaataccgatcttcaagtttcccgtcacttaattgataagagactccatagcttca 456

                                                                       
Query: 282 aagaatagaggcacaaactccctgtttggagtcttcactgcacactttgcaccaggagca 341
           ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||
Sbjct: 455 aagaatagaggcacaaactccctgtttggagtcttgactgcacacttggcaccaggaaca 396

                                              
Query: 342 ccaacggcagcagtaagctctatcaggaatggaat 376
           ||||| |||||||||||||||||||| ||||||||
Sbjct: 395 ccaacagcagcagtaagctctatcagaaatggaat 361



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 1   catgtactatgacatagcaagaaaaa 26
           ||||| ||||||||||||||||||||
Sbjct: 732 catgtgctatgacatagcaagaaaaa 707
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 98/115 (85%)
 Strand = Plus / Plus

                                                                            
Query: 256      acttgataagagactccatagcttcaaagaatagaggcacaaactccctgtttggagtct 315
                |||||| |||||||||||| ||||| ||||| |||| ||| | |||| |||||||||| |
Sbjct: 13561552 acttgagaagagactccatggcttcgaagaagagagccaccatctccttgtttggagttt 13561611

                                                                       
Query: 316      tcactgcacactttgcaccaggagcaccaacggcagcagtaagctctatcaggaa 370
                | || ||||||||  | |||||| |||| || |||||||||||||||||||||||
Sbjct: 13561612 tgaccgcacacttcacgccaggaacaccgactgcagcagtaagctctatcaggaa 13561666
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>gb|AC137073.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBb0005A11, from chromosome 3, complete sequence
          Length = 168219

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 98/115 (85%)
 Strand = Plus / Plus

                                                                          
Query: 256    acttgataagagactccatagcttcaaagaatagaggcacaaactccctgtttggagtct 315
              |||||| |||||||||||| ||||| ||||| |||| ||| | |||| |||||||||| |
Sbjct: 121443 acttgagaagagactccatggcttcgaagaagagagccaccatctccttgtttggagttt 121502

                                                                     
Query: 316    tcactgcacactttgcaccaggagcaccaacggcagcagtaagctctatcaggaa 370
              | || ||||||||  | |||||| |||| || |||||||||||||||||||||||
Sbjct: 121503 tgaccgcacacttcacgccaggaacaccgactgcagcagtaagctctatcaggaa 121557
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 98/115 (85%)
 Strand = Plus / Plus

                                                                            
Query: 256      acttgataagagactccatagcttcaaagaatagaggcacaaactccctgtttggagtct 315
                |||||| |||||||||||| ||||| ||||| |||| ||| | |||| |||||||||| |
Sbjct: 13557427 acttgagaagagactccatggcttcgaagaagagagccaccatctccttgtttggagttt 13557486

                                                                       
Query: 316      tcactgcacactttgcaccaggagcaccaacggcagcagtaagctctatcaggaa 370
                | || ||||||||  | |||||| |||| || |||||||||||||||||||||||
Sbjct: 13557487 tgaccgcacacttcacgccaggaacaccgactgcagcagtaagctctatcaggaa 13557541
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>dbj|AK071247.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087B10, full
            insert sequence
          Length = 1904

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 98/115 (85%)
 Strand = Plus / Minus

                                                                        
Query: 256  acttgataagagactccatagcttcaaagaatagaggcacaaactccctgtttggagtct 315
            |||||| |||||||||||| ||||| ||||| |||| ||| | |||| |||||||||| |
Sbjct: 1728 acttgagaagagactccatggcttcgaagaagagagccaccatctccttgtttggagttt 1669

                                                                   
Query: 316  tcactgcacactttgcaccaggagcaccaacggcagcagtaagctctatcaggaa 370
            | || ||||||||  | |||||| |||| || |||||||||||||||||||||||
Sbjct: 1668 tgaccgcacacttcacgccaggaacaccgactgcagcagtaagctctatcaggaa 1614
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>dbj|AK069084.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007F10, full
            insert sequence
          Length = 1842

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 98/115 (85%)
 Strand = Plus / Minus

                                                                        
Query: 256  acttgataagagactccatagcttcaaagaatagaggcacaaactccctgtttggagtct 315
            |||||| |||||||||||| ||||| ||||| |||| ||| | |||| |||||||||| |
Sbjct: 1479 acttgagaagagactccatggcttcgaagaagagagccaccatctccttgtttggagttt 1420

                                                                   
Query: 316  tcactgcacactttgcaccaggagcaccaacggcagcagtaagctctatcaggaa 370
            | || ||||||||  | |||||| |||| || |||||||||||||||||||||||
Sbjct: 1419 tgaccgcacacttcacgccaggaacaccgactgcagcagtaagctctatcaggaa 1365
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>dbj|AK059077.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-A07, full
           insert sequence
          Length = 834

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 98/115 (85%)
 Strand = Plus / Minus

                                                                       
Query: 256 acttgataagagactccatagcttcaaagaatagaggcacaaactccctgtttggagtct 315
           |||||| |||||||||||| ||||| ||||| |||| ||| | |||| |||||||||| |
Sbjct: 546 acttgagaagagactccatggcttcgaagaagagagccaccatctccttgtttggagttt 487

                                                                  
Query: 316 tcactgcacactttgcaccaggagcaccaacggcagcagtaagctctatcaggaa 370
           | || ||||||||  | |||||| |||| || |||||||||||||||||||||||
Sbjct: 486 tgaccgcacacttcacgccaggaacaccgactgcagcagtaagctctatcaggaa 432
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>dbj|AK068938.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169D19, full
            insert sequence
          Length = 2979

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 92/108 (85%)
 Strand = Plus / Minus

                                                                        
Query: 263  aagagactccatagcttcaaagaatagaggcacaaactccctgtttggagtcttcactgc 322
            |||||||||||| ||||| ||||| |||| ||| | |||| |||||||||| || || ||
Sbjct: 2706 aagagactccatggcttcgaagaagagagccaccatctccttgtttggagttttgaccgc 2647

                                                            
Query: 323  acactttgcaccaggagcaccaacggcagcagtaagctctatcaggaa 370
            ||||||  | |||||| |||| || |||||||||||||||||||||||
Sbjct: 2646 acacttcacgccaggaacaccgactgcagcagtaagctctatcaggaa 2599
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>gb|AY109428.1| Zea mays CL501_1 mRNA sequence
          Length = 3187

 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 91/107 (85%)
 Strand = Plus / Plus

                                                                       
Query: 264 agagactccatagcttcaaagaatagaggcacaaactccctgtttggagtcttcactgca 323
           |||| |||||||||||||||||| ||||| || | |||||| ||||| || || ||||||
Sbjct: 356 agagcctccatagcttcaaagaagagaggaaccatctccctatttggtgttttgactgca 415

                                                          
Query: 324 cactttgcaccaggagcaccaacggcagcagtaagctctatcaggaa 370
           |||||  |||||||| ||||||| ||||| |||| |||||| |||||
Sbjct: 416 cacttcacaccaggaacaccaaccgcagctgtaacctctataaggaa 462
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>gb|AC073133.9| Homo sapiens BAC clone RP11-691F21 from 7, complete sequence
          Length = 95280

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 203   ctcataactgaataattttgac 224
             ||||||||||||||||||||||
Sbjct: 57533 ctcataactgaataattttgac 57512
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 69      aaatgtccaggatgagtatccc 90
               ||||||||||||||||||||||
Sbjct: 7266918 aaatgtccaggatgagtatccc 7266897
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>dbj|AP004736.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9,
           BAC clone:OSJNBa0062A09
          Length = 173541

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 69  aaatgtccaggatgagtatccc 90
           ||||||||||||||||||||||
Sbjct: 881 aaatgtccaggatgagtatccc 860
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>dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1381_H04
          Length = 130961

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 69     aaatgtccaggatgagtatccc 90
              ||||||||||||||||||||||
Sbjct: 119023 aaatgtccaggatgagtatccc 119002
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>emb|AL161554.2|ATCHRIV54 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 54
          Length = 198715

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 150    ataacaacacaatacaattca 170
              |||||||||||||||||||||
Sbjct: 188407 ataacaacacaatacaattca 188427
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>emb|AL031187.1|ATT6K22 Arabidopsis thaliana DNA chromosome 4, BAC clone T6K22 (ESSAII project)
          Length = 89219

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 150   ataacaacacaatacaattca 170
             |||||||||||||||||||||
Sbjct: 45130 ataacaacacaatacaattca 45150
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>emb|AL807815.3| Mouse DNA sequence from clone RP23-207H16 on chromosome 4, complete
             sequence
          Length = 206914

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 39    aaaggcaagatatacaattta 59
             |||||||||||||||||||||
Sbjct: 50133 aaaggcaagatatacaattta 50153
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>gb|AC127314.4| Mus musculus BAC clone RP23-217N4 from chromosome 18, complete sequence
          Length = 232320

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 149    aataacaacacaatacaatt 168
              ||||||||||||||||||||
Sbjct: 151220 aataacaacacaatacaatt 151239
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>gb|AC129179.3| Mus musculus BAC clone RP23-240C24 from chromosome 18, complete sequence
          Length = 208462

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 149    aataacaacacaatacaatt 168
              ||||||||||||||||||||
Sbjct: 196667 aataacaacacaatacaatt 196648
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>emb|Z70306.1|CEC06G8 Caenorhabditis elegans Cosmid C06G8, complete sequence
          Length = 31143

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 96    aattctgaaaccaagaaact 115
             ||||||||||||||||||||
Sbjct: 26630 aattctgaaaccaagaaact 26611
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>emb|CR381641.12| Zebrafish DNA sequence from clone DKEY-189N10 in linkage group 7,
             complete sequence
          Length = 168455

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   tagaagtaacacaataacaa 156
             ||||||||||||||||||||
Sbjct: 80485 tagaagtaacacaataacaa 80504
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>emb|AL160159.12| Human DNA sequence from clone RP11-71K7 on chromosome 13, complete
             sequence
          Length = 129575

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 37    tcaaaggcaagatatacaatttat 60
             ||||||||||||| ||||||||||
Sbjct: 29688 tcaaaggcaagatttacaatttat 29711
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>emb|AL078462.9|HSJ159G19 Human DNA sequence from clone RP1-159G19 on chromosome 6q14.1-14.3
             Contains the 3' part of a novel gene, complete sequence
          Length = 88509

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 140   aagtaacacaataacaacacaata 163
             |||||||||||||| |||||||||
Sbjct: 22962 aagtaacacaataataacacaata 22939
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>gb|AF517750.1| Mus musculus chromosome 18 NFS107 proviral integration site
          Length = 1655

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 149 aataacaacacaatacaatt 168
           ||||||||||||||||||||
Sbjct: 52  aataacaacacaatacaatt 71
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>gb|AC068951.18| Oryza sativa chromosome 10 BAC OSJNBa0042E19 genomic sequence, complete
              sequence
          Length = 149978

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                  
Query: 256    acttgataagagactccatagcttcaaagaatagag 291
              |||||| |||||||||||| ||||| ||||| ||||
Sbjct: 109697 acttgagaagagactccatggcttcgaagaagagag 109662
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>emb|BX324007.16| Zebrafish DNA sequence from clone CH211-233C16 in linkage group 16,
              complete sequence
          Length = 165294

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 131    gtaaagtagaagtaacacaa 150
              ||||||||||||||||||||
Sbjct: 116674 gtaaagtagaagtaacacaa 116693
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>gb|AC079439.26| Mus musculus strain 129/Sv chromosome 2 clone ct7-295g23, complete
             sequence
          Length = 115747

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 178   ttccatgaaacagcacagct 197
             ||||||||||||||||||||
Sbjct: 33060 ttccatgaaacagcacagct 33041
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>dbj|AK136716.1| Mus musculus adult male epididymis cDNA, RIKEN full-length enriched
           library, clone:9230028P05 product:unclassifiable, full
           insert sequence
          Length = 1057

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 178 ttccatgaaacagcacagct 197
           ||||||||||||||||||||
Sbjct: 543 ttccatgaaacagcacagct 562
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>gb|AC120670.8| Rattus norvegicus 2 BAC CH230-23N23 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 228097

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    ctagaaaattctgaaaccaa 109
             ||||||||||||||||||||
Sbjct: 16993 ctagaaaattctgaaaccaa 17012
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>gb|AC154501.2| Mus musculus BAC clone RP24-87F14 from chromosome 14, complete sequence
          Length = 215658

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 147   acaataacaacacaatacaattca 170
             |||||||||||| |||||||||||
Sbjct: 47726 acaataacaacaaaatacaattca 47749
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>gb|AF298202.1| Dictyostelium discoideum putative transposon DDT-B, complete
           sequence
          Length = 5471

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 144 aacacaataacaacacaata 163
           ||||||||||||||||||||
Sbjct: 797 aacacaataacaacacaata 778



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 144 aacacaataacaacacaata 163
           ||||||||||||||||||||
Sbjct: 752 aacacaataacaacacaata 733
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>tpg|BK001437.1| TPA: TPA_exp: Homo sapiens SULT6B1 (SULT6B1) gene, complete cds;
             alternatively spliced
          Length = 34001

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   atgctcataactgaataatt 219
             ||||||||||||||||||||
Sbjct: 22591 atgctcataactgaataatt 22610
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>gb|AC017067.4|AC017067 Homo sapiens BAC clone RP11-370B11 from 9, complete sequence
          Length = 191373

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 94    aaaattctgaaaccaagaaa 113
             ||||||||||||||||||||
Sbjct: 33949 aaaattctgaaaccaagaaa 33968
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                    
Query: 256      acttgataagagactccatagcttcaaagaatagag 291
                |||||| |||||||||||| ||||| ||||| ||||
Sbjct: 16491598 acttgagaagagactccatggcttcgaagaagagag 16491563
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>gb|AC007899.3| Homo sapiens BAC clone RP11-531C11 from 2, complete sequence
          Length = 118195

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   atgctcataactgaataatt 219
             ||||||||||||||||||||
Sbjct: 13587 atgctcataactgaataatt 13606
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>emb|BX901906.3| Mouse DNA sequence from clone RP23-328F9 on chromosome 2, complete
             sequence
          Length = 213629

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 178   ttccatgaaacagcacagct 197
             ||||||||||||||||||||
Sbjct: 57543 ttccatgaaacagcacagct 57524
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>gb|AC113458.10| Mus musculus chromosome 3, clone RP23-372O21, complete sequence
          Length = 232529

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 288    agaggcacaaactccctgtt 307
              ||||||||||||||||||||
Sbjct: 146507 agaggcacaaactccctgtt 146488
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>dbj|AK066946.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089G05, full
           insert sequence
          Length = 575

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 256 acttgataagagactccatagcttcaaagaatagag 291
           |||||| |||||||||||| ||||| ||||| ||||
Sbjct: 399 acttgagaagagactccatggcttcgaagaagagag 364
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>emb|BX248238.5| Zebrafish DNA sequence from clone CH211-169J21 in linkage group 20,
              complete sequence
          Length = 158302

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 147    acaataacaacacaatacaa 166
              ||||||||||||||||||||
Sbjct: 126271 acaataacaacacaatacaa 126290
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>emb|AL132668.4|CNS01DT9 Human chromosome 14 DNA sequence BAC R-550M19 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 175725

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 287   tagaggcacaaactccctgt 306
             ||||||||||||||||||||
Sbjct: 98529 tagaggcacaaactccctgt 98548
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>gb|AC170734.3| Sorex araneus clone SA_Ba-257D3, complete sequence
          Length = 122469

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 322   cacactttgcaccaggagca 341
             ||||||||||||||||||||
Sbjct: 47122 cacactttgcaccaggagca 47103
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>emb|BX004808.5| Zebrafish DNA sequence from clone CH211-51B23 in linkage group 16,
             complete sequence
          Length = 184760

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   gtaaagtagaagtaacacaa 150
             ||||||||||||||||||||
Sbjct: 47402 gtaaagtagaagtaacacaa 47383



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   gtaaagtagaagtaacacaa 150
             ||||||||||||||||||||
Sbjct: 46938 gtaaagtagaagtaacacaa 46919
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                    
Query: 256      acttgataagagactccatagcttcaaagaatagag 291
                |||||| |||||||||||| ||||| ||||| ||||
Sbjct: 16499839 acttgagaagagactccatggcttcgaagaagagag 16499804
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>emb|AL844146.2| Mouse DNA sequence from clone RP24-89J1 on chromosome 2, complete
             sequence
          Length = 233417

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 178   ttccatgaaacagcacagct 197
             ||||||||||||||||||||
Sbjct: 85626 ttccatgaaacagcacagct 85645


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,620,322
Number of Sequences: 3902068
Number of extensions: 3620322
Number of successful extensions: 68427
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68234
Number of HSP's gapped (non-prelim): 190
length of query: 376
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 354
effective length of database: 17,147,199,772
effective search space: 6070108719288
effective search space used: 6070108719288
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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