Clone Name | rbastl40c12 |
---|---|
Clone Library Name | barley_pub |
>TACT_HUMAN (P40200) T-cell surface protein tactile precursor (CD96 antigen)| Length = 569 Score = 28.9 bits (63), Expect = 3.3 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = +3 Query: 111 NFPWRSAPPQSEVSLCTVPTRAVGESPS*AHST 209 N+PW S+ ++ S+ +P+ SPS A ST Sbjct: 428 NYPWTSSGTDTKKSVSRIPSETYSSSPSGAGST 460
>MTH1_HAEIN (P20590) Modification methylase HinfI (EC 2.1.1.72)| (Adenine-specific methyltransferase HinfI) (M.HinfI) Length = 359 Score = 28.5 bits (62), Expect = 4.3 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = +3 Query: 147 VSLCTVPTRAVGESPS*AHSTNRSKTIIYTPKQESPSMNDIM 272 +SLCT R E AHST + ++++Y S ND++ Sbjct: 175 LSLCTGKERIKDEEGKKAHSTQKPESLLYKVILSSSKPNDVV 216
>THBG_PIG (Q9TT35) Thyroxine-binding globulin precursor (T4-binding globulin)| (Serpin A7) Length = 412 Score = 28.1 bits (61), Expect = 5.6 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%) Frame = +2 Query: 191 QLSSLYKPQQNDNLHPQTGISEHE*YHAF--FATAKPVMNSLTSPLARSSAV 340 +++S PQQN LH + I+ ++ + FA P N SP++ S+A+ Sbjct: 25 KVTSCLSPQQNATLHKMSSINADFAFNLYRRFAVETPDQNIFFSPVSISAAL 76
>JD2AB_XENLA (Q5HZN1) JmjC domain-containing histone demethylation protein 2A-B| (EC 1.14.11.-) (Jumonji domain-containing protein 1A-B) Length = 1334 Score = 28.1 bits (61), Expect = 5.6 Identities = 14/45 (31%), Positives = 22/45 (48%) Frame = +2 Query: 164 ADPSSW*ISQLSSLYKPQQNDNLHPQTGISEHE*YHAFFATAKPV 298 + P SW + ++ + DNL T SEH+ +F + KPV Sbjct: 831 SSPLSWLTNFPQTIVNKENKDNLFASTSKSEHKPLPSFASFGKPV 875
>TGM5_HUMAN (O43548) Protein-glutamine gamma-glutamyltransferase 5 (EC| 2.3.2.13) (Transglutaminase-5) (TGase 5) (Transglutaminase X) (TGase X) (TGX) (TG(X)) Length = 719 Score = 27.7 bits (60), Expect = 7.3 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 5/41 (12%) Frame = +3 Query: 75 TKVLFVRFSNYSNFPW-----RSAPPQSEVSLCTVPTRAVG 182 T+ +F ++S PW + +EVSLC PT AVG Sbjct: 72 TRAVFSLARHHSPSPWIAWLETNGATSTEVSLCAPPTAAVG 112
>R1AB_CVHSA (P59641) Replicase polyprotein 1ab (pp1ab) (ORF1AB) [Includes:| Replicase polyprotein 1a (pp1a) (ORF1A)] [Contains: Leader protein; p65 homolog; NSP1 (EC 3.4.22.-) (Papain-like proteinase) (PL-PRO); 3C-like proteinase (EC 3.4.22.-) (3CL-PRO) (3 Length = 7073 Score = 27.7 bits (60), Expect = 7.3 Identities = 21/67 (31%), Positives = 27/67 (40%) Frame = +1 Query: 112 TFHGDQLLHKARSVFVPCRPEQLVNLPAKLTLQTAAKR*STPPNRNLRA*MISCLFRNGE 291 T GD A SVF C Q V L T + + RNL+ + CL+RN + Sbjct: 5049 TSSGDATTAYANSVFNIC---QAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRD 5105 Query: 292 AGDELPD 312 E D Sbjct: 5106 VDHEFVD 5112
>PLK4_MOUSE (Q64702) Serine/threonine-protein kinase PLK4 (EC 2.7.11.21)| (Polo-like kinase 4) (PLK-4) (Serine/threonine-protein kinase Sak) (Serine/threonine-protein kinase 18) Length = 925 Score = 27.7 bits (60), Expect = 7.3 Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 12/93 (12%) Frame = +2 Query: 80 SPVRQVQQLLKLSMEISSSTKRGQSLYRADPSS--W*ISQLSSL-------YKPQ---QN 223 SP R Q L + ++ ++ AD S+ + QLS++ +KP+ Q Sbjct: 463 SPNRDFQDYPDLQDTLRNAWTDTRASKNADTSANVHAVKQLSAMKYMSAHHHKPEVMPQE 522 Query: 224 DNLHPQTGISEHE*YHAFFATAKPVMNSLTSPL 322 LHP + S++ + KP + S+TSPL Sbjct: 523 PGLHPHSEQSKNRSMESTLGYQKPTLRSITSPL 555
>CDYL_MOUSE (Q9WTK2) Chromodomain Y-like protein (CDY-like)| Length = 593 Score = 27.3 bits (59), Expect = 9.5 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 3/50 (6%) Frame = +3 Query: 126 SAPPQSEVSLCTVPTRAVGESPS*AHSTNRSKTI---IYTPKQESPSMND 266 S P E LCT+P +A E P+ ++ ++ + + P Q SP++ D Sbjct: 6 SQPNSQEAQLCTLPEKA--EQPTDDNTCQQNNVVPATVSEPDQASPAIQD 53
>194K_TRVSY (P05080) Putative 194 kDa protein (Putative replicase) [Contains:| 134 kDa protein] Length = 1707 Score = 27.3 bits (59), Expect = 9.5 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +3 Query: 51 LPQLKDDATKVLFVRFSNYSNFPWRSAPP 137 L Q K+ A + L +FSNYS R++PP Sbjct: 613 LQQKKEIADEFLSAKFSNYSGSSVRTSPP 641
>HEX_VIBVU (Q04786) Beta-hexosaminidase (EC 3.2.1.52)| (N-acetyl-beta-glucosaminidase) (Beta-N-acetylhexosaminidase) (Chitobiase) Length = 847 Score = 27.3 bits (59), Expect = 9.5 Identities = 12/33 (36%), Positives = 20/33 (60%) Frame = +1 Query: 7 KVFSFLPNNIIQYINCLS*RMTQRKSCSSGSAT 105 KVFSF+P N+ + ++ RM + S ++G T Sbjct: 648 KVFSFMPENVPANVEWMTDRMGAKISATTGEKT 680
>MURD_LEPIN (Q8F7V4) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC| 6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid-adding enzyme) Length = 463 Score = 27.3 bits (59), Expect = 9.5 Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 3/98 (3%) Frame = -3 Query: 293 ASPLRKRHDIIHARRFLFGGVDYRFAAVCRVSLAGRFTNCS---GRHGTKTDLALWRS*S 123 A + + + I R LF G+ +RF + L F N S H +A W++ Sbjct: 278 AEEIGGKPESIQTRIPLFRGLPHRFQ-IAGEKLGISFINDSKSTNLHSMLAGMATWKNID 336 Query: 122 PWKV*VVAEPDEQDFRCVILQLRQLIYCIMLFGRKEKT 9 + + P ++D + + L + I C++LFG T Sbjct: 337 QTCLILGGRPKQEDLKPLYNFLIRGIGCVVLFGEARAT 374
>MURD_LEPIC (Q72NP4) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC| 6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid-adding enzyme) Length = 463 Score = 27.3 bits (59), Expect = 9.5 Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 3/98 (3%) Frame = -3 Query: 293 ASPLRKRHDIIHARRFLFGGVDYRFAAVCRVSLAGRFTNCS---GRHGTKTDLALWRS*S 123 A + + + I R LF G+ +RF + L F N S H +A W++ Sbjct: 278 AEEIGGKPESIQTRIPLFRGLPHRFQ-IAGEKLGISFINDSKSTNLHSMLAGMATWKNID 336 Query: 122 PWKV*VVAEPDEQDFRCVILQLRQLIYCIMLFGRKEKT 9 + + P ++D + + L + I C++LFG T Sbjct: 337 QTCLILGGRPKQEDLKPLYNFLIKGIGCVVLFGEARAT 374
>ZDH20_HUMAN (Q5W0Z9) Probable palmitoyltransferase ZDHHC20 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 20) (DHHC-20) Length = 365 Score = 27.3 bits (59), Expect = 9.5 Identities = 16/47 (34%), Positives = 23/47 (48%) Frame = +3 Query: 156 CTVPTRAVGESPS*AHSTNRSKTIIYTPKQESPSMNDIMPFSQRRSR 296 C+ PTR VG P A TN+++ Y S I P S+ ++R Sbjct: 290 CSFPTRLVGMDPEQASVTNQNE---YARSSGSNQPFPIKPLSESKNR 333 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,944,839 Number of Sequences: 219361 Number of extensions: 978248 Number of successful extensions: 2186 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 2139 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2186 length of database: 80,573,946 effective HSP length: 91 effective length of database: 60,612,095 effective search space used: 1454690280 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)