ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl40c05 |
|---|---|
| Clone Library Name | barley_pub |
>VPP4_HUMAN (Q9HBG4) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 4 (V-ATPase 116-kDa isoform a4) (Vacuolar proton translocating ATPase 116 kDa subunit a kidney isoform) Length = 840 Score = 69.3 bits (168), Expect = 4e-12 Identities = 30/32 (93%), Positives = 31/32 (96%) Frame = -2 Query: 426 LSAFLHALRLHWVEFQNKFYEGDGYKFAPFSF 331 LSAFLHALRLHWVEFQNKFY GDGYKF+PFSF Sbjct: 799 LSAFLHALRLHWVEFQNKFYVGDGYKFSPFSF 830
>VPP1_CAEEL (P30628) Probable vacuolar proton translocating ATPase 116 kDa| subunit a (Uncoordinated protein 32) Length = 905 Score = 67.0 bits (162), Expect = 2e-11 Identities = 32/45 (71%), Positives = 35/45 (77%) Frame = -2 Query: 426 LSAFLHALRLHWVEFQNKFYEGDGYKFAPFSFALISEDEE*ARPN 292 LSAFLHALRLHWVEFQ+KFY G GY+FAPFSF I +E A N Sbjct: 860 LSAFLHALRLHWVEFQSKFYGGLGYEFAPFSFEKILAEEREAEEN 904
>VPP1_PONPY (Q5R422) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 1 (V-ATPase 116-kDa isoform a1) Length = 837 Score = 66.6 bits (161), Expect = 2e-11 Identities = 30/37 (81%), Positives = 31/37 (83%) Frame = -2 Query: 426 LSAFLHALRLHWVEFQNKFYEGDGYKFAPFSFALISE 316 LSAFLHALRLHWVEFQNKFY G G+KF PFSF I E Sbjct: 796 LSAFLHALRLHWVEFQNKFYSGTGFKFLPFSFEHIRE 832
>VPP1_HUMAN (Q93050) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 1 (V-ATPase 116-kDa isoform a1) (Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit) (Vacuolar proton pump subunit 1) (Vacuolar adenosine triphosphatase Length = 837 Score = 66.6 bits (161), Expect = 2e-11 Identities = 30/37 (81%), Positives = 31/37 (83%) Frame = -2 Query: 426 LSAFLHALRLHWVEFQNKFYEGDGYKFAPFSFALISE 316 LSAFLHALRLHWVEFQNKFY G G+KF PFSF I E Sbjct: 796 LSAFLHALRLHWVEFQNKFYSGTGFKFLPFSFEHIRE 832
>VPP1_BOVIN (Q29466) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 1 (V-ATPase 116-kDa isoform a1) (Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit) (Vacuolar proton pump subunit 1) (Vacuolar adenosine triphosphatase Length = 838 Score = 66.6 bits (161), Expect = 2e-11 Identities = 30/37 (81%), Positives = 31/37 (83%) Frame = -2 Query: 426 LSAFLHALRLHWVEFQNKFYEGDGYKFAPFSFALISE 316 LSAFLHALRLHWVEFQNKFY G G+KF PFSF I E Sbjct: 797 LSAFLHALRLHWVEFQNKFYSGTGFKFLPFSFEHIRE 833
>VPP1_MOUSE (Q9Z1G4) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 1 (V-ATPase 116-kDa isoform a1) (Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit) (Vacuolar proton pump subunit 1) (Vacuolar adenosine triphosphatase Length = 839 Score = 66.2 bits (160), Expect = 3e-11 Identities = 30/37 (81%), Positives = 31/37 (83%) Frame = -2 Query: 426 LSAFLHALRLHWVEFQNKFYEGDGYKFAPFSFALISE 316 LSAFLHALRLHWVEFQNKFY G G+KF PFSF I E Sbjct: 798 LSAFLHALRLHWVEFQNKFYTGTGFKFLPFSFEHIRE 834
>VPP4_MOUSE (Q920R6) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 4 (V-ATPase 116-kDa isoform a4) (Vacuolar proton translocating ATPase 116 kDa subunit a kidney isoform) Length = 833 Score = 66.2 bits (160), Expect = 3e-11 Identities = 30/37 (81%), Positives = 32/37 (86%) Frame = -2 Query: 426 LSAFLHALRLHWVEFQNKFYEGDGYKFAPFSFALISE 316 LSAFLHALRLHWVEFQNKFYEG G KF+PFSF + E Sbjct: 792 LSAFLHALRLHWVEFQNKFYEGAGSKFSPFSFKHVLE 828
>VPP1_RAT (P25286) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 1 (V-ATPase 116-kDa isoform a1) (Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit) (Vacuolar proton pump subunit 1) (Vacuolar adenosine triphosphatase su Length = 838 Score = 66.2 bits (160), Expect = 3e-11 Identities = 30/37 (81%), Positives = 31/37 (83%) Frame = -2 Query: 426 LSAFLHALRLHWVEFQNKFYEGDGYKFAPFSFALISE 316 LSAFLHALRLHWVEFQNKFY G G+KF PFSF I E Sbjct: 797 LSAFLHALRLHWVEFQNKFYTGTGFKFLPFSFEHIRE 833
>VPP2_MOUSE (P15920) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 2 (V-ATPase 116-kDa isoform a2) (Immune suppressor factor J6B7) Length = 856 Score = 65.9 bits (159), Expect = 4e-11 Identities = 29/36 (80%), Positives = 32/36 (88%) Frame = -2 Query: 426 LSAFLHALRLHWVEFQNKFYEGDGYKFAPFSFALIS 319 LSAFLHA+RLHWVEFQNKFY G G KF PFSF+L+S Sbjct: 811 LSAFLHAIRLHWVEFQNKFYVGAGTKFVPFSFSLLS 846
>VPP2_HUMAN (Q9Y487) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 2 (V-ATPase 116-kDa isoform a2) (TJ6) Length = 856 Score = 65.9 bits (159), Expect = 4e-11 Identities = 29/36 (80%), Positives = 32/36 (88%) Frame = -2 Query: 426 LSAFLHALRLHWVEFQNKFYEGDGYKFAPFSFALIS 319 LSAFLHA+RLHWVEFQNKFY G G KF PFSF+L+S Sbjct: 811 LSAFLHAIRLHWVEFQNKFYVGAGTKFVPFSFSLLS 846
>VPP3_HUMAN (Q13488) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 3 (V-ATPase 116-kDa isoform a3) (Osteoclastic proton pump 116 kDa subunit) (OC-116 kDa) (OC116) (T-cell immune regulator 1) (T cell immune response cDNA7 protein) (TIRC7) Length = 830 Score = 65.5 bits (158), Expect = 5e-11 Identities = 28/33 (84%), Positives = 30/33 (90%) Frame = -2 Query: 426 LSAFLHALRLHWVEFQNKFYEGDGYKFAPFSFA 328 LSAFLHALRLHWVEFQNKFY G GYK +PF+FA Sbjct: 794 LSAFLHALRLHWVEFQNKFYSGTGYKLSPFTFA 826
>VPP2_BOVIN (O97681) Vacuolar proton translocating ATPase 116 kDa subunit A| isoform 2 (V-ATPase 116-kDa isoform a2) Length = 854 Score = 65.1 bits (157), Expect = 7e-11 Identities = 29/36 (80%), Positives = 31/36 (86%) Frame = -2 Query: 426 LSAFLHALRLHWVEFQNKFYEGDGYKFAPFSFALIS 319 LSAFLHA+RLHWVEFQNKFY G G KF PFSF L+S Sbjct: 811 LSAFLHAIRLHWVEFQNKFYVGAGTKFVPFSFRLLS 846
>STV1_YEAST (P37296) Vacuolar ATP synthase subunit a, Golgi isoform (EC| 3.6.3.14) (V-ATPase 101 kDa subunit) (V-ATPase subunit AC115) (Similar to VPH1 protein 1) Length = 890 Score = 55.8 bits (133), Expect = 4e-08 Identities = 24/36 (66%), Positives = 28/36 (77%) Frame = -2 Query: 423 SAFLHALRLHWVEFQNKFYEGDGYKFAPFSFALISE 316 SA LHALRLHWVE +KF+EG+GY + PFSF I E Sbjct: 855 SAMLHALRLHWVEAMSKFFEGEGYAYEPFSFRAIIE 890
>VPH1_SCHPO (O13742) Probable vacuolar ATP synthase 91 kDa subunit (Vacuolar| ATPase 91 kDa subunit) Length = 805 Score = 52.0 bits (123), Expect = 6e-07 Identities = 21/36 (58%), Positives = 28/36 (77%) Frame = -2 Query: 423 SAFLHALRLHWVEFQNKFYEGDGYKFAPFSFALISE 316 SA LH+LRLHWVE +K +EG+GY F PF+F + +E Sbjct: 770 SAMLHSLRLHWVEGMSKHFEGEGYAFTPFTFKVTAE 805
>VATI_METJA (Q57675) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 695 Score = 48.5 bits (114), Expect = 7e-06 Identities = 20/30 (66%), Positives = 26/30 (86%) Frame = -2 Query: 426 LSAFLHALRLHWVEFQNKFYEGDGYKFAPF 337 L AF+H+LRLH+VEF ++FYEG G KF+PF Sbjct: 657 LGAFIHSLRLHYVEFFSQFYEGGGKKFSPF 686
>VATI_PYRHO (O57721) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 659 Score = 47.0 bits (110), Expect = 2e-05 Identities = 20/31 (64%), Positives = 24/31 (77%) Frame = -2 Query: 426 LSAFLHALRLHWVEFQNKFYEGDGYKFAPFS 334 L AF+HALRLH+VEF FY G+G KF PF+ Sbjct: 617 LGAFVHALRLHYVEFFGTFYSGEGRKFEPFA 647
>VATI_PYRAB (Q9UXU2) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 659 Score = 47.0 bits (110), Expect = 2e-05 Identities = 20/31 (64%), Positives = 24/31 (77%) Frame = -2 Query: 426 LSAFLHALRLHWVEFQNKFYEGDGYKFAPFS 334 L AF+HALRLH+VEF FY G+G KF PF+ Sbjct: 617 LGAFVHALRLHYVEFFGTFYSGEGRKFEPFA 647
>VPH1_YEAST (P32563) Vacuolar ATP synthase subunit a, vacuolar isoform (EC| 3.6.3.14) (V-ATPase a subunit) (Vacuolar proton pump a subunit) (V-ATPase 95 kDa subunit) (Vacuolar pH protein 1) Length = 839 Score = 45.8 bits (107), Expect = 4e-05 Identities = 18/31 (58%), Positives = 24/31 (77%) Frame = -2 Query: 423 SAFLHALRLHWVEFQNKFYEGDGYKFAPFSF 331 SA LH+LRLHWVE +KF+ G+G + PF+F Sbjct: 791 SAMLHSLRLHWVESMSKFFVGEGLPYEPFAF 821
>VATI_PYRKO (Q5JDS2) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 663 Score = 45.4 bits (106), Expect = 6e-05 Identities = 19/30 (63%), Positives = 23/30 (76%) Frame = -2 Query: 426 LSAFLHALRLHWVEFQNKFYEGDGYKFAPF 337 L AF+HALRLH+VEF FY G+G +F PF Sbjct: 621 LGAFVHALRLHYVEFFGTFYSGEGKRFEPF 650
>VATI_HALSA (Q9HND8) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 722 Score = 43.1 bits (100), Expect = 3e-04 Identities = 20/31 (64%), Positives = 23/31 (74%) Frame = -2 Query: 423 SAFLHALRLHWVEFQNKFYEGDGYKFAPFSF 331 SA L ALRL +VEF NKFYEG G K+ PF + Sbjct: 684 SAGLQALRLEYVEFFNKFYEGGGEKYNPFGY 714
>VATI_METMA (O59659) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 649 Score = 43.1 bits (100), Expect = 3e-04 Identities = 19/28 (67%), Positives = 21/28 (75%) Frame = -2 Query: 414 LHALRLHWVEFQNKFYEGDGYKFAPFSF 331 LHALRL +VEF KFYEG G KF PF + Sbjct: 615 LHALRLQYVEFFGKFYEGGGRKFNPFGY 642
>VPH1_NEUCR (Q01290) Vacuolar ATP synthase 98 kDa subunit (Vacuolar ATPase 98| kDa subunit) Length = 856 Score = 42.7 bits (99), Expect = 4e-04 Identities = 21/40 (52%), Positives = 26/40 (65%) Frame = -2 Query: 426 LSAFLHALRLHWVEFQNKFYEGDGYKFAPFSFALISEDEE 307 +SA LH+LRL WVE +KF E G+ F PFSF E+ E Sbjct: 810 VSAMLHSLRLAWVESFSKFAEFGGWPFTPFSFKQQLEESE 849
>NTPI_ENTHR (P43439) V-type sodium ATP synthase subunit I (EC 3.6.3.15)| (Na(+)-translocating ATPase subunit I) Length = 664 Score = 37.0 bits (84), Expect = 0.020 Identities = 16/29 (55%), Positives = 19/29 (65%) Frame = -2 Query: 426 LSAFLHALRLHWVEFQNKFYEGDGYKFAP 340 LSA++H RL +VEF KFY G G F P Sbjct: 621 LSAYVHGARLQYVEFFGKFYTGGGRSFKP 649
>VATI_ARCFU (O29106) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 676 Score = 35.8 bits (81), Expect = 0.044 Identities = 15/26 (57%), Positives = 19/26 (73%) Frame = -2 Query: 414 LHALRLHWVEFQNKFYEGDGYKFAPF 337 L +LRLH+VEF KF+EG G + PF Sbjct: 642 LQSLRLHYVEFFTKFFEGGGRLYEPF 667
>VATI_SULSO (Q9UWW3) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 701 Score = 35.4 bits (80), Expect = 0.058 Identities = 16/29 (55%), Positives = 19/29 (65%) Frame = -2 Query: 426 LSAFLHALRLHWVEFQNKFYEGDGYKFAP 340 L F+ LRLH+ E +KFYEG G KF P Sbjct: 665 LVVFIQDLRLHFYEMFSKFYEGRGRKFEP 693
>VATI_METTH (O27041) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 658 Score = 35.0 bits (79), Expect = 0.075 Identities = 16/31 (51%), Positives = 22/31 (70%) Frame = -2 Query: 429 TLSAFLHALRLHWVEFQNKFYEGDGYKFAPF 337 +L AF+++LRLH+VEF +FY G KF F Sbjct: 617 SLGAFINSLRLHYVEFFAQFYMGGKNKFNAF 647
>VATI_AERPE (Q9YEA0) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 686 Score = 35.0 bits (79), Expect = 0.075 Identities = 15/29 (51%), Positives = 19/29 (65%) Frame = -2 Query: 426 LSAFLHALRLHWVEFQNKFYEGDGYKFAP 340 L AF HA RLH+ E+ +KFY G G + P Sbjct: 643 LLAFAHASRLHFYEWFSKFYSGTGVPYTP 671
>VATI_THEAC (Q9HM61) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 637 Score = 30.8 bits (68), Expect = 1.4 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = -2 Query: 414 LHALRLHWVEFQNKFYEGDGYKFAPF 337 + RL +VEF +KFY G+G F PF Sbjct: 595 IQGARLIYVEFFSKFYHGNGRMFRPF 620
>VATI_CHLPN (Q9Z990) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 660 Score = 29.3 bits (64), Expect = 4.1 Identities = 12/40 (30%), Positives = 22/40 (55%) Frame = -2 Query: 426 LSAFLHALRLHWVEFQNKFYEGDGYKFAPFSFALISEDEE 307 + +H LRL+++E+ + ++G G P + SED E Sbjct: 609 MGGVIHGLRLNFIEWYHYSFDGGGRPLRPLRKIVCSEDAE 648
>RHG25_HUMAN (P42331) Rho-GTPase-activating protein 25| Length = 638 Score = 28.5 bits (62), Expect = 7.1 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = -2 Query: 318 EDEE*ARPNSCIYCSLCNILRVALLPEQS 232 +DEE +P C+Y C I +A PE++ Sbjct: 72 KDEEDTKPQGCMYLPGCTIKEIATNPEEA 100
>ZAP1_YEAST (P47043) Zinc-responsive transcriptional regulator ZAP1| Length = 880 Score = 28.1 bits (61), Expect = 9.2 Identities = 19/61 (31%), Positives = 30/61 (49%) Frame = +2 Query: 164 KMMLHHPHSNKGLGFYD*SVTNNDCSGNKATRKILQRLQ*IQEFGRAHSSSSLISANENG 343 K + HH H+N G G D S T N+ +GN+ +L + R + ++L +N N Sbjct: 399 KHINHHDHNNAGNG-CDGSSTGNNENGNQTMNLLLSSI------NRCNPKNNLNGSNNNT 451 Query: 344 A 346 A Sbjct: 452 A 452 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,155,715 Number of Sequences: 219361 Number of extensions: 1293690 Number of successful extensions: 3324 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 3262 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3323 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2395157885 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
