ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbastl40c05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT018300.1| Zea mays clone EL01T0206D10.c mRNA sequence Length = 828 Score = 149 bits (75), Expect = 9e-33 Identities = 120/135 (88%) Strand = Plus / Minus Query: 296 ggacgagctcactcttcgtcctcactgattagcgcaaacgagaatggtgcgaacttgtaa 355 |||||| |||| ||||| ||||||| || |||||||| ||||||| |||||||||||| Sbjct: 502 ggacgatctcaatcttcttcctcacgaatcagcgcaaagtagaatggggcgaacttgtaa 443 Query: 356 ccatcaccctcatagaacttgttctggaactccacccagtggagcctcaaggcatgaagg 415 |||||||| |||||||||||||||||||||||||||||||| ||||||| || |||||| Sbjct: 442 ccatcaccttcatagaacttgttctggaactccacccagtgaagcctcagtgcgtgaagg 383 Query: 416 aatgcacttagggtc 430 |||||||| |||||| Sbjct: 382 aatgcactcagggtc 368
>gb|BT017633.1| Zea mays clone EL01N0437F06.c mRNA sequence Length = 961 Score = 131 bits (66), Expect = 2e-27 Identities = 114/130 (87%) Strand = Plus / Minus Query: 301 agctcactcttcgtcctcactgattagcgcaaacgagaatggtgcgaacttgtaaccatc 360 |||||| ||||| ||||||| || ||||| || |||||||| || |||||||| ||||| Sbjct: 615 agctcaatcttcctcctcacgaatcagcgcgaaggagaatggggcaaacttgtagccatc 556 Query: 361 accctcatagaacttgttctggaactccacccagtggagcctcaaggcatgaaggaatgc 420 ||| |||||||||||||||||||||||||||||||| ||||||| || ||||||||||| Sbjct: 555 accttcatagaacttgttctggaactccacccagtgaagcctcagcgcgtgaaggaatgc 496 Query: 421 acttagggtc 430 ||| |||||| Sbjct: 495 actcagggtc 486
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 119 bits (60), Expect = 8e-24 Identities = 111/128 (86%) Strand = Plus / Minus Query: 303 ctcactcttcgtcctcactgattagcgcaaacgagaatggtgcgaacttgtaaccatcac 362 |||| ||||| || |||||||| || || || ||||| || || |||||||| ||||| | Sbjct: 7960001 ctcagtcttcctcttcactgatcagtgcgaaagagaagggcgcaaacttgtatccatcgc 7959942 Query: 363 cctcatagaacttgttctggaactccacccagtggagcctcaaggcatgaaggaatgcac 422 |||||||||| |||||||||||||||||||| || ||||| ||||| ||||||||||||| Sbjct: 7959941 cctcatagaatttgttctggaactccacccaatgtagccttaaggcgtgaaggaatgcac 7959882 Query: 423 ttagggtc 430 |||||||| Sbjct: 7959881 ttagggtc 7959874 Score = 46.1 bits (23), Expect = 0.094 Identities = 32/35 (91%) Strand = Plus / Minus Query: 65 ttattagcattacgccaaaataagggtaatgccac 99 |||||||| |||| ||||||||||||| ||||||| Sbjct: 7960236 ttattagccttacaccaaaataagggtgatgccac 7960202
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 119 bits (60), Expect = 8e-24 Identities = 111/128 (86%) Strand = Plus / Minus Query: 303 ctcactcttcgtcctcactgattagcgcaaacgagaatggtgcgaacttgtaaccatcac 362 |||| ||||| || |||||||| || || || ||||| || || |||||||| ||||| | Sbjct: 7957836 ctcagtcttcctcttcactgatcagtgcgaaagagaagggcgcaaacttgtatccatcgc 7957777 Query: 363 cctcatagaacttgttctggaactccacccagtggagcctcaaggcatgaaggaatgcac 422 |||||||||| |||||||||||||||||||| || ||||| ||||| ||||||||||||| Sbjct: 7957776 cctcatagaatttgttctggaactccacccaatgtagccttaaggcgtgaaggaatgcac 7957717 Query: 423 ttagggtc 430 |||||||| Sbjct: 7957716 ttagggtc 7957709 Score = 46.1 bits (23), Expect = 0.094 Identities = 32/35 (91%) Strand = Plus / Minus Query: 65 ttattagcattacgccaaaataagggtaatgccac 99 |||||||| |||| ||||||||||||| ||||||| Sbjct: 7958071 ttattagccttacaccaaaataagggtgatgccac 7958037
>gb|AC134240.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0081I10, complete sequence Length = 143298 Score = 119 bits (60), Expect = 8e-24 Identities = 111/128 (86%) Strand = Plus / Minus Query: 303 ctcactcttcgtcctcactgattagcgcaaacgagaatggtgcgaacttgtaaccatcac 362 |||| ||||| || |||||||| || || || ||||| || || |||||||| ||||| | Sbjct: 27364 ctcagtcttcctcttcactgatcagtgcgaaagagaagggcgcaaacttgtatccatcgc 27305 Query: 363 cctcatagaacttgttctggaactccacccagtggagcctcaaggcatgaaggaatgcac 422 |||||||||| |||||||||||||||||||| || ||||| ||||| ||||||||||||| Sbjct: 27304 cctcatagaatttgttctggaactccacccaatgtagccttaaggcgtgaaggaatgcac 27245 Query: 423 ttagggtc 430 |||||||| Sbjct: 27244 ttagggtc 27237 Score = 46.1 bits (23), Expect = 0.094 Identities = 32/35 (91%) Strand = Plus / Minus Query: 65 ttattagcattacgccaaaataagggtaatgccac 99 |||||||| |||| ||||||||||||| ||||||| Sbjct: 27599 ttattagccttacaccaaaataagggtgatgccac 27565
>gb|AC134235.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0030J04, complete sequence Length = 153431 Score = 119 bits (60), Expect = 8e-24 Identities = 111/128 (86%) Strand = Plus / Minus Query: 303 ctcactcttcgtcctcactgattagcgcaaacgagaatggtgcgaacttgtaaccatcac 362 |||| ||||| || |||||||| || || || ||||| || || |||||||| ||||| | Sbjct: 145599 ctcagtcttcctcttcactgatcagtgcgaaagagaagggcgcaaacttgtatccatcgc 145540 Query: 363 cctcatagaacttgttctggaactccacccagtggagcctcaaggcatgaaggaatgcac 422 |||||||||| |||||||||||||||||||| || ||||| ||||| ||||||||||||| Sbjct: 145539 cctcatagaatttgttctggaactccacccaatgtagccttaaggcgtgaaggaatgcac 145480 Query: 423 ttagggtc 430 |||||||| Sbjct: 145479 ttagggtc 145472 Score = 46.1 bits (23), Expect = 0.094 Identities = 32/35 (91%) Strand = Plus / Minus Query: 65 ttattagcattacgccaaaataagggtaatgccac 99 |||||||| |||| ||||||||||||| ||||||| Sbjct: 145834 ttattagccttacaccaaaataagggtgatgccac 145800
>dbj|AK119298.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-E09, full insert sequence Length = 3025 Score = 119 bits (60), Expect = 8e-24 Identities = 111/128 (86%) Strand = Plus / Minus Query: 303 ctcactcttcgtcctcactgattagcgcaaacgagaatggtgcgaacttgtaaccatcac 362 |||| ||||| || |||||||| || || || ||||| || || |||||||| ||||| | Sbjct: 2658 ctcagtcttcctcttcactgatcagtgcgaaagagaagggcgcaaacttgtatccatcgc 2599 Query: 363 cctcatagaacttgttctggaactccacccagtggagcctcaaggcatgaaggaatgcac 422 |||||||||| |||||||||||||||||||| || ||||| ||||| ||||||||||||| Sbjct: 2598 cctcatagaatttgttctggaactccacccaatgtagccttaaggcgtgaaggaatgcac 2539 Query: 423 ttagggtc 430 |||||||| Sbjct: 2538 ttagggtc 2531 Score = 46.1 bits (23), Expect = 0.094 Identities = 32/35 (91%) Strand = Plus / Minus Query: 65 ttattagcattacgccaaaataagggtaatgccac 99 |||||||| |||| ||||||||||||| ||||||| Sbjct: 2893 ttattagccttacaccaaaataagggtgatgccac 2859
>dbj|AK101151.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027C12, full insert sequence Length = 3018 Score = 119 bits (60), Expect = 8e-24 Identities = 111/128 (86%) Strand = Plus / Minus Query: 303 ctcactcttcgtcctcactgattagcgcaaacgagaatggtgcgaacttgtaaccatcac 362 |||| ||||| || |||||||| || || || ||||| || || |||||||| ||||| | Sbjct: 2651 ctcagtcttcctcttcactgatcagtgcgaaagagaagggcgcaaacttgtatccatcgc 2592 Query: 363 cctcatagaacttgttctggaactccacccagtggagcctcaaggcatgaaggaatgcac 422 |||||||||| |||||||||||||||||||| || ||||| ||||| ||||||||||||| Sbjct: 2591 cctcatagaatttgttctggaactccacccaatgtagccttaaggcgtgaaggaatgcac 2532 Query: 423 ttagggtc 430 |||||||| Sbjct: 2531 ttagggtc 2524 Score = 46.1 bits (23), Expect = 0.094 Identities = 32/35 (91%) Strand = Plus / Minus Query: 65 ttattagcattacgccaaaataagggtaatgccac 99 |||||||| |||| ||||||||||||| ||||||| Sbjct: 2886 ttattagccttacaccaaaataagggtgatgccac 2852
>ref|NM_195204.1| Oryza sativa (japonica cultivar-group) putative proton pump (OSJNBa0029P16.14), mRNA Length = 2352 Score = 111 bits (56), Expect = 2e-21 Identities = 77/84 (91%) Strand = Plus / Minus Query: 347 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtggagcctcaag 406 |||||||| ||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 2309 aacttgtatccatcaccctcgtaaaacttgttctggaactccacccagtggagcctcaga 2250 Query: 407 gcatgaaggaatgcacttagggtc 430 ||||| | |||||||||||||||| Sbjct: 2249 gcatgcaagaatgcacttagggtc 2226
>gb|AC093568.2| Oryza sativa chromosome 10 clone OSJNBa0029P16, complete sequence Length = 173644 Score = 111 bits (56), Expect = 2e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 347 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtggagcctcaag 406 |||||||| ||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 104026 aacttgtatccatcaccctcgtaaaacttgttctggaactccacccagtggagcctcaga 104085 Query: 407 gcatgaaggaatgcacttagggtc 430 ||||| | |||||||||||||||| Sbjct: 104086 gcatgcaagaatgcacttagggtc 104109
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 111 bits (56), Expect = 2e-21 Identities = 77/84 (91%) Strand = Plus / Minus Query: 347 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtggagcctcaag 406 |||||||| ||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 5439622 aacttgtatccatcaccctcgtaaaacttgttctggaactccacccagtggagcctcaga 5439563 Query: 407 gcatgaaggaatgcacttagggtc 430 ||||| | |||||||||||||||| Sbjct: 5439562 gcatgcaagaatgcacttagggtc 5439539
>dbj|AK058856.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-005-B12, full insert sequence Length = 689 Score = 111 bits (56), Expect = 2e-21 Identities = 77/84 (91%) Strand = Plus / Minus Query: 347 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtggagcctcaag 406 |||||||| ||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 277 aacttgtatccatcaccctcgtaaaacttgttctggaactccacccagtggagcctcaga 218 Query: 407 gcatgaaggaatgcacttagggtc 430 ||||| | |||||||||||||||| Sbjct: 217 gcatgcaagaatgcacttagggtc 194
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 111 bits (56), Expect = 2e-21 Identities = 77/84 (91%) Strand = Plus / Minus Query: 347 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtggagcctcaag 406 |||||||| ||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 5440409 aacttgtatccatcaccctcgtaaaacttgttctggaactccacccagtggagcctcaga 5440350 Query: 407 gcatgaaggaatgcacttagggtc 430 ||||| | |||||||||||||||| Sbjct: 5440349 gcatgcaagaatgcacttagggtc 5440326
>ref|NM_127713.3| Arabidopsis thaliana ATPase AT2G21410 mRNA, complete cds Length = 2860 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 347 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtggagcctcaag 406 |||||||||||||| || || ||||||||||||||| ||||||||||||| || | ||| Sbjct: 2506 aacttgtaaccatcgccttcgtagaacttgttctggtactccacccagtgaagacgcaac 2447 Query: 407 gcatgaaggaatgcact 423 || |||||||||||||| Sbjct: 2446 gcgtgaaggaatgcact 2430
>gb|AY124855.1| Arabidopsis thaliana At2g21410/F3K23.17 mRNA, complete cds Length = 2466 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 347 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtggagcctcaag 406 |||||||||||||| || || ||||||||||||||| ||||||||||||| || | ||| Sbjct: 2423 aacttgtaaccatcgccttcgtagaacttgttctggtactccacccagtgaagacgcaac 2364 Query: 407 gcatgaaggaatgcact 423 || |||||||||||||| Sbjct: 2363 gcgtgaaggaatgcact 2347
>gb|AY099690.1| Arabidopsis thaliana putative vacuolar proton-ATPase subunit (At2g21410) mRNA, complete cds Length = 2667 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 347 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtggagcctcaag 406 |||||||||||||| || || ||||||||||||||| ||||||||||||| || | ||| Sbjct: 2502 aacttgtaaccatcgccttcgtagaacttgttctggtactccacccagtgaagacgcaac 2443 Query: 407 gcatgaaggaatgcact 423 || |||||||||||||| Sbjct: 2442 gcgtgaaggaatgcact 2426
>gb|AC006841.7| Arabidopsis thaliana chromosome 2 clone F3K23 map mi148, complete sequence Length = 125045 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 347 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtggagcctcaag 406 |||||||||||||| || || ||||||||||||||| ||||||||||||| || | ||| Sbjct: 65137 aacttgtaaccatcgccttcgtagaacttgttctggtactccacccagtgaagacgcaac 65078 Query: 407 gcatgaaggaatgcact 423 || |||||||||||||| Sbjct: 65077 gcgtgaaggaatgcact 65061
>gb|AF424556.1|AF424556 Arabidopsis thaliana At2g21410/F3K23.17 mRNA, complete cds Length = 2631 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 347 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtggagcctcaag 406 |||||||||||||| || || ||||||||||||||| ||||||||||||| || | ||| Sbjct: 2459 aacttgtaaccatcgccttcgtagaacttgttctggtactccacccagtgaagacgcaac 2400 Query: 407 gcatgaaggaatgcact 423 || |||||||||||||| Sbjct: 2399 gcgtgaaggaatgcact 2383
>dbj|AK221420.1| Arabidopsis thaliana mRNA for putative vacuolar proton-ATPase subunit, complete cds, clone: RAFL05-04-L13 Length = 357 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 347 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtggagcctcaag 406 |||||||||||||| || || ||||||||||||||| ||||||||||||| || | ||| Sbjct: 181 aacttgtaaccatcgccttcgtagaacttgttctggtactccacccagtgaagacgcaac 122 Query: 407 gcatgaaggaatgcact 423 || |||||||||||||| Sbjct: 121 gcgtgaaggaatgcact 105
>gb|AY053417.1| Arabidopsis thaliana At2g21410/F3K23.17 mRNA, complete cds Length = 2852 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 347 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtggagcctcaag 406 |||||||||||||| || || ||||||||||||||| ||||||||||||| || | ||| Sbjct: 2498 aacttgtaaccatcgccttcgtagaacttgttctggtactccacccagtgaagacgcaac 2439 Query: 407 gcatgaaggaatgcact 423 || |||||||||||||| Sbjct: 2438 gcgtgaaggaatgcact 2422
>dbj|D21309.1|RICSS281 Oryza sativa SS281 mRNA for T cell produced protein, partial sequence Length = 370 Score = 81.8 bits (41), Expect = 2e-12 Identities = 55/60 (91%) Strand = Plus / Minus Query: 371 aacttgttctggaactccacccagtggagcctcaaggcatgaaggaatgcacttagggtc 430 |||||||||||||||||||||||||| ||||||| ||||| | |||||||||||||||| Sbjct: 330 aacttgttctggaactccacccagtgnagcctcagagcatgcaagaatgcacttagggtc 271
>emb|AJ580823.1|LCO580823 Lotus corniculatus var. japonicus ORF1, ORF2, ORF3 and genes for vacuolar proton-ATPase subunit-like protein, papain-like cysteine proteinase-like protein 1 and papain-like cysteine proteinase-like protein 2 Length = 46563 Score = 77.8 bits (39), Expect = 3e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 346 gaacttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 396 ||||||||||||||| |||||||| |||||||| ||||||||||||||||| Sbjct: 21564 gaacttgtaaccatcgccctcataaaacttgttttggaactccacccagtg 21514
>dbj|AP005666.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT09E01, TM0258b, complete sequence Length = 46491 Score = 77.8 bits (39), Expect = 3e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 346 gaacttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 396 ||||||||||||||| |||||||| |||||||| ||||||||||||||||| Sbjct: 21630 gaacttgtaaccatcgccctcataaaacttgttttggaactccacccagtg 21580
>dbj|AB092808.1| Lotus japonicus gene for hypothetical proteins, complete and partial cds, clone:BAC259.12D-1 Length = 32644 Score = 77.8 bits (39), Expect = 3e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 346 gaacttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 396 ||||||||||||||| |||||||| |||||||| ||||||||||||||||| Sbjct: 8739 gaacttgtaaccatcgccctcataaaacttgttttggaactccacccagtg 8689
>ref|XM_597181.2| PREDICTED: Bos taurus similar to ATPase, H+ transporting, lysosomal V0 subunit a isoform 4, transcript variant 1 (LOC518974), mRNA Length = 3157 Score = 69.9 bits (35), Expect = 6e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 335 gagaatggtgcgaacttgtaaccatcaccctcatagaacttgttctggaactccacccag 394 |||||||| | ||||||||||||| | || ||||||||||| ||||||||||||||| Sbjct: 2477 gagaatggagagaacttgtaaccagccccagtgtagaacttgttttggaactccacccag 2418 Query: 395 tggagcctcaaggcatgaaggaa 417 || ||||||| |||||| ||||| Sbjct: 2417 tgcagcctcagggcatgcaggaa 2395
>ref|XM_873205.1| PREDICTED: Bos taurus similar to ATPase, H+ transporting, lysosomal V0 subunit a isoform 4, transcript variant 3 (LOC518974), mRNA Length = 2105 Score = 69.9 bits (35), Expect = 6e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 335 gagaatggtgcgaacttgtaaccatcaccctcatagaacttgttctggaactccacccag 394 |||||||| | ||||||||||||| | || ||||||||||| ||||||||||||||| Sbjct: 1425 gagaatggagagaacttgtaaccagccccagtgtagaacttgttttggaactccacccag 1366 Query: 395 tggagcctcaaggcatgaaggaa 417 || ||||||| |||||| ||||| Sbjct: 1365 tgcagcctcagggcatgcaggaa 1343
>ref|XM_864430.1| PREDICTED: Bos taurus similar to ATPase, H+ transporting, lysosomal V0 subunit a isoform 4, transcript variant 2 (LOC518974), mRNA Length = 3163 Score = 69.9 bits (35), Expect = 6e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 335 gagaatggtgcgaacttgtaaccatcaccctcatagaacttgttctggaactccacccag 394 |||||||| | ||||||||||||| | || ||||||||||| ||||||||||||||| Sbjct: 2483 gagaatggagagaacttgtaaccagccccagtgtagaacttgttttggaactccacccag 2424 Query: 395 tggagcctcaaggcatgaaggaa 417 || ||||||| |||||| ||||| Sbjct: 2423 tgcagcctcagggcatgcaggaa 2401
>ref|XM_853949.1| PREDICTED: Canis familiaris similar to ATPase, H+ transporting, lysosomal V0 subunit a isoform 4, transcript variant 4 (LOC482779), mRNA Length = 2793 Score = 69.9 bits (35), Expect = 6e-09 Identities = 62/71 (87%) Strand = Plus / Minus Query: 347 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtggagcctcaag 406 |||||||||||| | || | ||||||||||||||||||||||||||||| || | || | Sbjct: 2462 aacttgtaaccagccccgacgtagaacttgttctggaactccacccagtgcagtcgcagg 2403 Query: 407 gcatgaaggaa 417 ||||||||||| Sbjct: 2402 gcatgaaggaa 2392
>ref|XM_539895.2| PREDICTED: Canis familiaris similar to ATPase, H+ transporting, lysosomal V0 subunit a isoform 4, transcript variant 2 (LOC482779), mRNA Length = 2802 Score = 69.9 bits (35), Expect = 6e-09 Identities = 62/71 (87%) Strand = Plus / Minus Query: 347 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtggagcctcaag 406 |||||||||||| | || | ||||||||||||||||||||||||||||| || | || | Sbjct: 2471 aacttgtaaccagccccgacgtagaacttgttctggaactccacccagtgcagtcgcagg 2412 Query: 407 gcatgaaggaa 417 ||||||||||| Sbjct: 2411 gcatgaaggaa 2401
>ref|XM_427533.1| PREDICTED: Gallus gallus similar to ATPase, H+ transporting, lysosomal V0 subunit a isoform 4; vacuolar proton pump 116 kDa accessory subunit; vacuolar proton pump, subunit 2; H(+)-transporting two-sector ATPase, noncatalytic accessory protein 1B; ATPase, H+ transporting, ... (LOC429976), partial mRNA Length = 510 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 366 catagaacttgttctggaactccacccagtggagcctcaaggcatg 411 ||||||||||||||||||||||||||||||| || | ||||||||| Sbjct: 442 catagaacttgttctggaactccacccagtgcaggcgcaaggcatg 397
>ref|NM_130840.2| Homo sapiens ATPase, H+ transporting, lysosomal V0 subunit a4 (ATP6V0A4), transcript variant 2, mRNA Length = 3049 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 347 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 396 |||||||||||||| || |||||||||||||||||||||| |||||||| Sbjct: 2654 aacttgtaaccatccccgacatagaacttgttctggaactcaacccagtg 2605
>ref|NM_020632.2| Homo sapiens ATPase, H+ transporting, lysosomal V0 subunit a4 (ATP6V0A4), transcript variant 1, mRNA Length = 3152 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 347 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 396 |||||||||||||| || |||||||||||||||||||||| |||||||| Sbjct: 2757 aacttgtaaccatccccgacatagaacttgttctggaactcaacccagtg 2708
>ref|NM_130841.2| Homo sapiens ATPase, H+ transporting, lysosomal V0 subunit a4 (ATP6V0A4), transcript variant 3, mRNA Length = 3107 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 347 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 396 |||||||||||||| || |||||||||||||||||||||| |||||||| Sbjct: 2712 aacttgtaaccatccccgacatagaacttgttctggaactcaacccagtg 2663
>gb|BC109305.1| Homo sapiens ATPase, H+ transporting, lysosomal V0 subunit a4, transcript variant 2, mRNA (cDNA clone MGC:130017 IMAGE:40035237), complete cds Length = 2709 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 347 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 396 |||||||||||||| || |||||||||||||||||||||| |||||||| Sbjct: 2562 aacttgtaaccatccccgacatagaacttgttctggaactcaacccagtg 2513
>gb|BC109304.1| Homo sapiens ATPase, H+ transporting, lysosomal V0 subunit a4, transcript variant 2, mRNA (cDNA clone MGC:130016 IMAGE:40035236), complete cds Length = 2709 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 347 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 396 |||||||||||||| || |||||||||||||||||||||| |||||||| Sbjct: 2562 aacttgtaaccatccccgacatagaacttgttctggaactcaacccagtg 2513
>emb|AJ720996.1| Gallus gallus mRNA for hypothetical protein, clone 32b14 Length = 3156 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 366 catagaacttgttctggaactccacccagtggagcctcaaggcatg 411 ||||||||||||||||||||||||||||||| || | ||||||||| Sbjct: 2761 catagaacttgttctggaactccacccagtgcaggcgcaaggcatg 2716
>dbj|AK055789.1| Homo sapiens cDNA FLJ31227 fis, clone KIDNE2004411, highly similar to Homo sapiens vacuolar proton pump 116 kDa accessory subunit (ATP6N1B) mRNA Length = 2037 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 347 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 396 |||||||||||||| || |||||||||||||||||||||| |||||||| Sbjct: 1659 aacttgtaaccatccccgacatagaacttgttctggaactcaacccagtg 1610
>gb|AF245517.1|AF245517 Homo sapiens vacuolar proton pump 116 kDa accessory subunit (ATP6N1B) mRNA, complete cds, alternatively spliced Length = 3137 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 347 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 396 |||||||||||||| || |||||||||||||||||||||| |||||||| Sbjct: 2742 aacttgtaaccatccccgacatagaacttgttctggaactcaacccagtg 2693
>gb|BC078964.1| Rattus norvegicus cDNA clone IMAGE:7111385, **** WARNING: chimeric clone **** Length = 2161 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 367 atagaacttgttctggaactccacccagtggagcctcaaggcatgaaggaa 417 |||||||||||||||||||||||||||||| | || || |||||| ||||| Sbjct: 2021 atagaacttgttctggaactccacccagtgcaaccgcagggcatgtaggaa 1971
>ref|NM_016921.2| Mus musculus T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3 (Tcirg1), mRNA Length = 2751 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 367 atagaacttgttctggaactccacccagtggagcctcaaggcatgaaggaa 417 |||||||||||||||||||||||||||||| | || || |||||| ||||| Sbjct: 2611 atagaacttgttctggaactccacccagtgcaaccgcagggcatgcaggaa 2561
>gb|BC061859.1| Rattus norvegicus T-cell, immune regulator 1, mRNA (cDNA clone MGC:72583 IMAGE:5598499), complete cds Length = 2454 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 367 atagaacttgttctggaactccacccagtggagcctcaaggcatgaaggaa 417 |||||||||||||||||||||||||||||| | || || |||||| ||||| Sbjct: 2310 atagaacttgttctggaactccacccagtgcaaccgcagggcatgtaggaa 2260
>dbj|AK155140.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630203K02 product:T-cell, immune regulator 1, full insert sequence Length = 3031 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 367 atagaacttgttctggaactccacccagtggagcctcaaggcatgaaggaa 417 |||||||||||||||||||||||||||||| | || || |||||| ||||| Sbjct: 2918 atagaacttgttctggaactccacccagtgcaaccgcagggcatgcaggaa 2868
>ref|NM_199089.2| Rattus norvegicus T-cell, immune regulator 1 (Tcirg1), mRNA Length = 2505 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 367 atagaacttgttctggaactccacccagtggagcctcaaggcatgaaggaa 417 |||||||||||||||||||||||||||||| | || || |||||| ||||| Sbjct: 2451 atagaacttgttctggaactccacccagtgcaaccgcagggcatgtaggaa 2401
>gb|BC085234.1| Mus musculus T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3, mRNA (cDNA clone MGC:102475 IMAGE:5322429), complete cds Length = 2626 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 367 atagaacttgttctggaactccacccagtggagcctcaaggcatgaaggaa 417 |||||||||||||||||||||||||||||| | || || |||||| ||||| Sbjct: 2471 atagaacttgttctggaactccacccagtgcaaccgcagggcatgcaggaa 2421
>gb|BC006761.1| Mus musculus T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3, mRNA (cDNA clone MGC:6328 IMAGE:3257437), complete cds Length = 2751 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 367 atagaacttgttctggaactccacccagtggagcctcaaggcatgaaggaa 417 |||||||||||||||||||||||||||||| | || || |||||| ||||| Sbjct: 2611 atagaacttgttctggaactccacccagtgcaaccgcagggcatgcaggaa 2561
>dbj|AK004094.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110034K16 product:ATPASE, H+ TRANSPORTING, LYSOSOMAL I (FRAGMENT), full insert sequence Length = 1537 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 367 atagaacttgttctggaactccacccagtggagcctcaaggcatgaaggaa 417 |||||||||||||||||||||||||||||| | || || |||||| ||||| Sbjct: 1421 atagaacttgttctggaactccacccagtgcaaccgcagggcatgcaggaa 1371
>gb|DQ286426.1| Rattus norvegicus v-H+ATPase subunit a3 mRNA, complete cds Length = 2505 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 367 atagaacttgttctggaactccacccagtggagcctcaaggcatgaaggaa 417 |||||||||||||||||||||||||||||| | || || |||||| ||||| Sbjct: 2451 atagaacttgttctggaactccacccagtgcaaccgcagggcatgtaggaa 2401
>ref|XM_574593.1| PREDICTED: Rattus norvegicus T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein a isoform 3 (Tcirg1), mRNA Length = 2671 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 367 atagaacttgttctggaactccacccagtggagcctcaaggcatgaaggaa 417 |||||||||||||||||||||||||||||| | || || |||||| ||||| Sbjct: 2554 atagaacttgttctggaactccacccagtgcaaccgcagggcatgtaggaa 2504
>gb|AF218254.1|AF218254 Mus musculus vacuolar proton-translocating ATPase 100 kDa subunit isoform a3 mRNA, partial cds Length = 2368 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 367 atagaacttgttctggaactccacccagtggagcctcaaggcatgaaggaa 417 |||||||||||||||||||||||||||||| | || || |||||| ||||| Sbjct: 2232 atagaacttgttctggaactccacccagtgcaaccgcagggcatgcaggaa 2182
>gb|AF218253.1|AF218253 Mus musculus vacuolar proton-translocating ATPase 100 kDa subunit isoform a3 mRNA, complete cds Length = 2709 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 367 atagaacttgttctggaactccacccagtggagcctcaaggcatgaaggaa 417 |||||||||||||||||||||||||||||| | || || |||||| ||||| Sbjct: 2549 atagaacttgttctggaactccacccagtgcaaccgcagggcatgcaggaa 2499
>dbj|AB022322.1| Mus musculus mRNA for a3 subunit of vacuolar-adenosine triphosphatase, complete cds Length = 2593 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 367 atagaacttgttctggaactccacccagtggagcctcaaggcatgaaggaa 417 |||||||||||||||||||||||||||||| | || || |||||| ||||| Sbjct: 2477 atagaacttgttctggaactccacccagtgcaaccgcagggcatgcaggaa 2427
>ref|XM_591411.2| PREDICTED: Bos taurus similar to T-cell, immune regulator 1 isoform a (LOC513684), mRNA Length = 2690 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtggagcc 401 ||||||||||||||||||||||||||||| |||| Sbjct: 2434 tagaacttgttctggaactccacccagtgcagcc 2401
>ref|XM_540812.2| PREDICTED: Canis familiaris similar to T-cell, immune regulator 1 isoform a, transcript variant 1 (LOC483691), mRNA Length = 2689 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtggagcc 401 ||||||||||||||||||||||||||||| |||| Sbjct: 2565 tagaacttgttctggaactccacccagtgtagcc 2532
>ref|XM_858982.1| PREDICTED: Canis familiaris similar to T-cell, immune regulator 1 isoform a, transcript variant 5 (LOC483691), mRNA Length = 2713 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtggagcc 401 ||||||||||||||||||||||||||||| |||| Sbjct: 2589 tagaacttgttctggaactccacccagtgtagcc 2556
>ref|XM_858965.1| PREDICTED: Canis familiaris similar to T-cell, immune regulator 1 isoform a, transcript variant 4 (LOC483691), mRNA Length = 2676 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtggagcc 401 ||||||||||||||||||||||||||||| |||| Sbjct: 2553 tagaacttgttctggaactccacccagtgtagcc 2520
>ref|XM_858943.1| PREDICTED: Canis familiaris similar to T-cell, immune regulator 1 isoform a, transcript variant 3 (LOC483691), mRNA Length = 2718 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtggagcc 401 ||||||||||||||||||||||||||||| |||| Sbjct: 2595 tagaacttgttctggaactccacccagtgtagcc 2562
>ref|XM_858926.1| PREDICTED: Canis familiaris similar to T-cell, immune regulator 1 isoform a, transcript variant 2 (LOC483691), mRNA Length = 2165 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtggagcc 401 ||||||||||||||||||||||||||||| |||| Sbjct: 2041 tagaacttgttctggaactccacccagtgtagcc 2008
>gb|BC114743.1| Bos taurus cDNA clone MGC:137911 IMAGE:8083238, complete cds Length = 2811 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtggagcc 401 ||||||||||||||||||||||||||||| |||| Sbjct: 2525 tagaacttgttctggaactccacccagtgcagcc 2492
>gb|AC020983.8| Homo sapiens chromosome 7 clone RP11-269N18, complete sequence Length = 174378 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 347 aacttgtaaccatcaccctcatagaacttgttctggaactccaccc 392 |||||||||||||| || |||||||||||||||||||||| |||| Sbjct: 122463 aacttgtaaccatccccgacatagaacttgttctggaactcaaccc 122508
>gb|AC018663.3|AC018663 Human Chromosome 7 clone RP11-288A3, complete sequence Length = 170423 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 347 aacttgtaaccatcaccctcatagaacttgttctggaactccaccc 392 |||||||||||||| || |||||||||||||||||||||| |||| Sbjct: 15963 aacttgtaaccatccccgacatagaacttgttctggaactcaaccc 16008
>dbj|AP006110.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT39G11, TM0195b, complete sequence Length = 52245 Score = 60.0 bits (30), Expect = 6e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 346 gaacttgtaaccatcaccctcatagaacttgttctggaactccacccagtggagcctcaa 405 ||||||||||||||| |||| ||| || |||||||| ||||| |||||||| || ||||| Sbjct: 21860 gaacttgtaaccatctccctgataaaatttgttctgaaactcaacccagtgaagtctcaa 21801 Query: 406 ggcatg 411 ||||| Sbjct: 21800 agcatg 21795
>ref|NM_120069.3| Arabidopsis thaliana RD19 (RESPONSIVE TO DEHYDRATION 19); cysteine-type peptidase AT4G39090 (RD19) mRNA, complete cds Length = 2514 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 344 gcgaacttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 396 ||||||||||||||||| || || ||||| |||||||| ||||| |||||||| Sbjct: 2377 gcgaacttgtaaccatctccttcgtagaatttgttctgaaactcaacccagtg 2429
>ref|NM_120068.3| Arabidopsis thaliana ATPase AT4G39080 mRNA, complete cds Length = 4147 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 344 gcgaacttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 396 ||||||||||||||||| || || ||||| |||||||| ||||| |||||||| Sbjct: 2510 gcgaacttgtaaccatctccttcgtagaatttgttctgaaactcaacccagtg 2458
>emb|AL161594.2|ATCHRIV90 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 90 Length = 198987 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 344 gcgaacttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 396 ||||||||||||||||| || || ||||| |||||||| ||||| |||||||| Sbjct: 128867 gcgaacttgtaaccatctccttcgtagaatttgttctgaaactcaacccagtg 128815
>emb|AL035679.1|ATF19H22 Arabidopsis thaliana DNA chromosome 4, BAC clone F19H22 (ESSA project) Length = 100469 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 344 gcgaacttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 396 ||||||||||||||||| || || ||||| |||||||| ||||| |||||||| Sbjct: 90857 gcgaacttgtaaccatctccttcgtagaatttgttctgaaactcaacccagtg 90805
>gb|AY060557.1| Arabidopsis thaliana AT4g39080/F19H22_180 mRNA, complete cds Length = 2819 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 344 gcgaacttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 396 ||||||||||||||||| || || ||||| |||||||| ||||| |||||||| Sbjct: 2501 gcgaacttgtaaccatctccttcgtagaatttgttctgaaactcaacccagtg 2449
>dbj|AK221976.1| Arabidopsis thaliana mRNA for hypothetical protein, partial cds, clone: RAFL22-57-M19 Length = 870 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 344 gcgaacttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 396 ||||||||||||||||| || || ||||| |||||||| ||||| |||||||| Sbjct: 549 gcgaacttgtaaccatctccttcgtagaatttgttctgaaactcaacccagtg 497
>emb|BX828835.1|CNS0A2O1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL42ZG11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 690 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 344 gcgaacttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 396 ||||||||||||||||| || || ||||| |||||||| ||||| |||||||| Sbjct: 380 gcgaacttgtaaccatctccttcgtagaatttgttctgaaactcaacccagtg 328
>emb|BX828782.1|CNS0A2IS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL38ZC08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 776 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 344 gcgaacttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 396 ||||||||||||||||| || || ||||| |||||||| ||||| |||||||| Sbjct: 465 gcgaacttgtaaccatctccttcgtagaatttgttctgaaactcaacccagtg 413
>ref|NM_174754.2| Bos taurus ATPase, H+ transporting, lysosomal V0 subunit a isoform 1 (ATP6V0A1), mRNA Length = 3151 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtg 396 ||||||||||||||||||||||||||||| Sbjct: 2580 tagaacttgttctggaactccacccagtg 2552
>gb|BT002615.1| Arabidopsis thaliana At4g39080/F19H22_180 mRNA, complete cds Length = 2466 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 344 gcgaacttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 396 ||||||||||||||||| || || ||||| |||||||| ||||| |||||||| Sbjct: 2426 gcgaacttgtaaccatctccttcgtagaatttgttctgaaactcaacccagtg 2374
>gb|L31770.1|BOVVHAS Bos taurus vacuolar H+-ATPase subunit mRNA, complete cds Length = 3151 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtg 396 ||||||||||||||||||||||||||||| Sbjct: 2580 tagaacttgttctggaactccacccagtg 2552
>ref|NM_080467.2| Mus musculus ATPase, H+ transporting, lysosomal V0 subunit A4 (Atp6v0a4), mRNA Length = 3318 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 362 ccctcatagaacttgttctggaactccaccca 393 ||||||||||||||||||||||| |||||||| Sbjct: 2702 ccctcatagaacttgttctggaattccaccca 2671
>gb|AF435090.1| Mus musculus vacuolar proton translocating ATPase a4 isoform mRNA, complete cds Length = 3318 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 362 ccctcatagaacttgttctggaactccaccca 393 ||||||||||||||||||||||| |||||||| Sbjct: 2702 ccctcatagaacttgttctggaattccaccca 2671
>gb|AC113501.7| Mus musculus chromosome 6, clone RP23-367E20, complete sequence Length = 196932 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 362 ccctcatagaacttgttctggaactccacccagtgg 397 ||||||||||||||||||||||| ||||||| |||| Sbjct: 192072 ccctcatagaacttgttctggaattccaccctgtgg 192107
>gb|AC157667.11| Mus musculus 6 BAC RP24-86B22 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 206878 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 362 ccctcatagaacttgttctggaactccacccagtgg 397 ||||||||||||||||||||||| ||||||| |||| Sbjct: 171796 ccctcatagaacttgttctggaattccaccctgtgg 171761
>gb|AF326316.1|AF326316 Mus musculus H-ATPase accessory subunit a4 mRNA, complete cds Length = 2661 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 362 ccctcatagaacttgttctggaactccaccca 393 ||||||||||||||||||||||| |||||||| Sbjct: 2508 ccctcatagaacttgttctggaattccaccca 2477
>gb|BC046979.1| Mus musculus ATPase, H+ transporting, lysosomal V0 subunit A4, mRNA (cDNA clone MGC:54824 IMAGE:6315485), complete cds Length = 3323 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 362 ccctcatagaacttgttctggaactccaccca 393 ||||||||||||||||||||||| |||||||| Sbjct: 2736 ccctcatagaacttgttctggaattccaccca 2705
>dbj|AB050903.1| Mus musculus mRNA for a4 subunit isoform, complete cds Length = 3014 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 362 ccctcatagaacttgttctggaactccaccca 393 ||||||||||||||||||||||| |||||||| Sbjct: 2440 ccctcatagaacttgttctggaattccaccca 2409
>gb|AY108620.1| Zea mays PCO149515 mRNA sequence Length = 733 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 346 gaacttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 396 ||||||||||||||| || | ||||||||||||| |||||| |||||||| Sbjct: 274 gaacttgtaaccatccccatgatagaacttgttcatgaactcaacccagtg 224
>ref|XM_522295.1| PREDICTED: Pan troglodytes T-cell, immune regulator 1 (LOC466895), mRNA Length = 1440 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtggagcc 401 ||||||||||||||||| ||||||||||| |||| Sbjct: 1385 tagaacttgttctggaattccacccagtgcagcc 1352
>gb|BT013720.1| Lycopersicon esculentum clone 132568R, mRNA sequence Length = 3001 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 347 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 396 |||||||| ||||| ||||| || ||||| || ||||||||||||||||| Sbjct: 2466 aacttgtatccatctccctcgtaaaacttattttggaactccacccagtg 2417
>emb|AJ893357.1| Phytophthora infestans, clone PI-BAC-49P21 Length = 137298 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 371 aacttgttctggaactccacccagtg 396 |||||||||||||||||||||||||| Sbjct: 51061 aacttgttctggaactccacccagtg 51036
>gb|AC133523.3| Mus musculus BAC clone RP23-34E20 from 19, complete sequence Length = 250866 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 367 atagaacttgttctggaactccaccc 392 |||||||||||||||||||||||||| Sbjct: 133049 atagaacttgttctggaactccaccc 133074
>gb|BC032465.1| Homo sapiens T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3, transcript variant 1, mRNA (cDNA clone MGC:40548 IMAGE:5210733), complete cds Length = 2722 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtggagcc 401 ||||||||||||||||| ||||||||||| |||| Sbjct: 2539 tagaacttgttctggaattccacccagtgcagcc 2506
>gb|BC018133.1| Homo sapiens T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3, transcript variant 1, mRNA (cDNA clone MGC:9307 IMAGE:3905446), complete cds Length = 2691 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtggagcc 401 ||||||||||||||||| ||||||||||| |||| Sbjct: 2546 tagaacttgttctggaattccacccagtgcagcc 2513
>emb|CR602058.1| full-length cDNA clone CS0DI059YF06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1655 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtggagcc 401 ||||||||||||||||| ||||||||||| |||| Sbjct: 1551 tagaacttgttctggaattccacccagtgcagcc 1518
>emb|CR599870.1| full-length cDNA clone CS0DI006YO09 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 671 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtggagcc 401 ||||||||||||||||| ||||||||||| |||| Sbjct: 540 tagaacttgttctggaattccacccagtgcagcc 507
>emb|CR594613.1| full-length cDNA clone CS0DD004YI18 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1864 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtggagcc 401 ||||||||||||||||| ||||||||||| |||| Sbjct: 1750 tagaacttgttctggaattccacccagtgcagcc 1717
>ref|NM_006019.2| Homo sapiens T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3 (TCIRG1), transcript variant 1, mRNA Length = 2700 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtggagcc 401 ||||||||||||||||| ||||||||||| |||| Sbjct: 2546 tagaacttgttctggaattccacccagtgcagcc 2513
>ref|NM_006053.2| Homo sapiens T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3 (TCIRG1), transcript variant 2, mRNA Length = 2480 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtggagcc 401 ||||||||||||||||| ||||||||||| |||| Sbjct: 2326 tagaacttgttctggaattccacccagtgcagcc 2293
>gb|AF188702.1|AF188702 Mus musculus osteoclast-specific 116-kDa V-ATPase subunit (Oc116) gene, complete cds Length = 11046 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 367 atagaacttgttctggaactccaccc 392 |||||||||||||||||||||||||| Sbjct: 10930 atagaacttgttctggaactccaccc 10905
>gb|AF025374.1|AF025374 Homo sapiens T cell immune response cDNA7 (TIRC7) mRNA, complete cds Length = 2488 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtggagcc 401 ||||||||||||||||| ||||||||||| |||| Sbjct: 2326 tagaacttgttctggaattccacccagtgcagcc 2293
>gb|U45285.1|HSU45285 Human specific 116-kDa vacuolar proton pump subunit (OC-116KDa) mRNA, complete cds Length = 2655 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtggagcc 401 ||||||||||||||||| ||||||||||| |||| Sbjct: 2492 tagaacttgttctggaattccacccagtgcagcc 2459
>dbj|AK159114.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420002E01 product:ATPase, H+ transporting, lysosomal V0 subunit a isoform 1, full insert sequence Length = 3920 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtg 396 ||||| ||||||||||||||||||||||| Sbjct: 2542 tagaatttgttctggaactccacccagtg 2514
>dbj|AK158786.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K430310H14 product:ATPase, H+ transporting, lysosomal V0 subunit a isoform 1, full insert sequence Length = 3794 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtg 396 ||||| ||||||||||||||||||||||| Sbjct: 2414 tagaatttgttctggaactccacccagtg 2386
>gb|BC071182.1| Mus musculus ATPase, H+ transporting, lysosomal V0 subunit A1, mRNA (cDNA clone MGC:76459 IMAGE:30101184), complete cds Length = 3980 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtg 396 ||||| ||||||||||||||||||||||| Sbjct: 2571 tagaatttgttctggaactccacccagtg 2543
>gb|BC066839.1| Mus musculus ATPase, H+ transporting, lysosomal V0 subunit A1, mRNA (cDNA clone MGC:76633 IMAGE:30101340), complete cds Length = 3980 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtg 396 ||||| ||||||||||||||||||||||| Sbjct: 2571 tagaatttgttctggaactccacccagtg 2543
>ref|NM_016920.2| Mus musculus ATPase, H+ transporting, lysosomal V0 subunit A1 (Atp6v0a1), mRNA Length = 4000 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtg 396 ||||| ||||||||||||||||||||||| Sbjct: 2621 tagaatttgttctggaactccacccagtg 2593
>dbj|AK217103.1| Mus musculus cDNA, clone:Y2G0140K13, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000044721, based on BLAT search Length = 347 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtg 396 ||||| ||||||||||||||||||||||| Sbjct: 35 tagaatttgttctggaactccacccagtg 7
>dbj|AK178418.1| Mus musculus cDNA, clone:Y0G0106K07, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000044721, based on BLAT search Length = 346 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtg 396 ||||| ||||||||||||||||||||||| Sbjct: 35 tagaatttgttctggaactccacccagtg 7
>dbj|AK177991.1| Mus musculus cDNA, clone:Y0G0105A14, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000044721, based on BLAT search Length = 175 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtg 396 ||||| ||||||||||||||||||||||| Sbjct: 35 tagaatttgttctggaactccacccagtg 7
>dbj|AK177315.1| Mus musculus cDNA, clone:Y0G0102F17, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000044721, based on BLAT search Length = 473 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtg 396 ||||| ||||||||||||||||||||||| Sbjct: 35 tagaatttgttctggaactccacccagtg 7
>gb|AF218251.1|AF218251 Mus musculus vacuolar proton-translocating ATPase 100 kDa subunit isoform a1-III mRNA, complete cds Length = 2499 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtg 396 ||||| ||||||||||||||||||||||| Sbjct: 2429 tagaatttgttctggaactccacccagtg 2401
>gb|AF218250.1|AF218250 Mus musculus vacuolar proton-translocating ATPase 100 kDa subunit isoform a1-II mRNA, complete cds Length = 2520 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtg 396 ||||| ||||||||||||||||||||||| Sbjct: 2450 tagaatttgttctggaactccacccagtg 2422
>gb|AF218249.1|AF218249 Mus musculus vacuolar proton-translocating ATPase 100 kDa subunit isoform a1-I mRNA, complete cds Length = 3999 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtg 396 ||||| ||||||||||||||||||||||| Sbjct: 2594 tagaatttgttctggaactccacccagtg 2566
>gb|U13836.1|MMU13836 Mus musculus vacuolar adenosine triphosphatase subunit Ac116 mRNA, complete cds Length = 2557 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtg 396 ||||| ||||||||||||||||||||||| Sbjct: 2468 tagaatttgttctggaactccacccagtg 2440
>emb|AJ249390.1|MSE249390 Manduca sexta mRNA for vacuolar ATPase subunit a (mva gene) Length = 3586 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtg 396 ||||||||| ||||||||||||||||||| Sbjct: 2588 tagaacttgctctggaactccacccagtg 2560
>dbj|AB022321.1| Mus musculus mRNA for vacuolar-adenosine trisphosphatase (V-ATPase), complete cds Length = 3815 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtg 396 ||||| ||||||||||||||||||||||| Sbjct: 2435 tagaatttgttctggaactccacccagtg 2407
>gb|BC060417.1| Xenopus laevis hypothetical protein MGC68661, mRNA (cDNA clone MGC:68661 IMAGE:4032775), complete cds Length = 3296 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Minus Query: 371 aacttgttctggaactccacccagtggagcct 402 |||||||||||||| || |||||||||||||| Sbjct: 2670 aacttgttctggaattcaacccagtggagcct 2639
>ref|XM_702948.1| PREDICTED: Danio rerio similar to Vacuolar proton translocating ATPase 116 kDa subunit a isoform 2 (V-ATPase 116-kDa isoform a2) (Immune suppressor factor J6B7), transcript variant 3 (LOC561117), mRNA Length = 3497 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtggag 399 |||||||| ||||| ||||||||||||||||| Sbjct: 2441 tagaacttattctgaaactccacccagtggag 2410
>ref|XM_680526.1| PREDICTED: Danio rerio similar to Vacuolar proton translocating ATPase 116 kDa subunit a isoform 2 (V-ATPase 116-kDa isoform a2) (Immune suppressor factor J6B7), transcript variant 1 (LOC561117), mRNA Length = 3530 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtggag 399 |||||||| ||||| ||||||||||||||||| Sbjct: 2474 tagaacttattctgaaactccacccagtggag 2443
>ref|XM_681374.1| PREDICTED: Danio rerio similar to Vacuolar proton translocating ATPase 116 kDa subunit a isoform 2 (V-ATPase 116-kDa isoform a2) (Immune suppressor factor J6B7) (LOC562096), mRNA Length = 3495 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtggag 399 |||||||| ||||| ||||||||||||||||| Sbjct: 2441 tagaacttattctgaaactccacccagtggag 2410
>ref|XM_680945.1| PREDICTED: Danio rerio similar to Vacuolar proton translocating ATPase 116 kDa subunit a isoform 2 (V-ATPase 116-kDa isoform a2) (Immune suppressor factor J6B7), transcript variant 1 (LOC561869), mRNA Length = 3495 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtggag 399 |||||||| ||||| ||||||||||||||||| Sbjct: 2441 tagaacttattctgaaactccacccagtggag 2410
>ref|XM_231615.3| PREDICTED: Rattus norvegicus ATPase, H+ transporting, lysosomal V0 subunit A isoform 4 (predicted) (Atp6v0a4_predicted), mRNA Length = 3273 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Minus Query: 362 ccctcatagaacttgttctggaactccaccca 393 ||||| ||||||||||||||||| |||||||| Sbjct: 2726 ccctcgtagaacttgttctggaattccaccca 2695
>ref|NM_166313.1| Drosophila melanogaster Vha100-3 CG30329-RA (Vha100-3), mRNA Length = 2715 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 379 ctggaactccacccagtggagcc 401 ||||||||||||||||||||||| Sbjct: 2643 ctggaactccacccagtggagcc 2621
>gb|AC099016.1| Drosophila melanogaster, chromosome 2R, region 56A-56A, BAC clone BACR27C21, complete sequence Length = 173373 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 379 ctggaactccacccagtggagcc 401 ||||||||||||||||||||||| Sbjct: 138778 ctggaactccacccagtggagcc 138800
>gb|AC008188.4|AC008188 Drosophila melanogaster, chromosome 2R, region 56A2-56B1, BAC clone BACR08I18, complete sequence Length = 160650 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 379 ctggaactccacccagtggagcc 401 ||||||||||||||||||||||| Sbjct: 5147 ctggaactccacccagtggagcc 5169
>gb|AE003797.3| Drosophila melanogaster chromosome 2R, section 53 of 73 of the complete sequence Length = 306854 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 379 ctggaactccacccagtggagcc 401 ||||||||||||||||||||||| Sbjct: 37437 ctggaactccacccagtggagcc 37459
>gb|BT001264.1| Drosophila melanogaster AT03238 full insert cDNA Length = 2488 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 379 ctggaactccacccagtggagcc 401 ||||||||||||||||||||||| Sbjct: 2315 ctggaactccacccagtggagcc 2293
>gb|AC004322.1|AC004322 Drosophila melanogaster DNA sequence (P1 DS01962 (D216)), complete sequence Length = 32480 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 379 ctggaactccacccagtggagcc 401 ||||||||||||||||||||||| Sbjct: 10376 ctggaactccacccagtggagcc 10398
>ref|XM_543370.2| PREDICTED: Canis familiaris similar to ATPase, H+ transporting, lysosomal V0 subunit a isoform 2, transcript variant 1 (LOC486245), mRNA Length = 3051 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Minus Query: 366 catagaacttgttctggaactccacccagtggag 399 |||||||||||||||| || || ||||||||||| Sbjct: 2639 catagaacttgttctgaaattctacccagtggag 2606
>emb|CR674876.2|CNS0FJPE Tetraodon nigroviridis full-length cDNA Length = 1344 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 371 aacttgttctggaactccacccagtg 396 |||||||| ||||||||||||||||| Sbjct: 766 aacttgttttggaactccacccagtg 741
>gb|BC095691.1| Danio rerio zgc:112214, mRNA (cDNA clone MGC:112214 IMAGE:7435771), complete cds Length = 2930 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccaccca 393 ||||| |||||||||||||||||||| Sbjct: 2562 tagaatttgttctggaactccaccca 2537
>ref|NM_001020666.1| Danio rerio zgc:112214 (zgc:112214), mRNA Length = 2930 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccaccca 393 ||||| |||||||||||||||||||| Sbjct: 2562 tagaatttgttctggaactccaccca 2537
>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome Length = 4607203 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 tacccttcgtgtaatccacat 156 ||||||||||||||||||||| Sbjct: 2851603 tacccttcgtgtaatccacat 2851623
>gb|BC066692.1| Danio rerio ATPase, H+ transporting, lysosomal V0 subunit a isoform 1, mRNA (cDNA clone MGC:76965 IMAGE:6525336), complete cds Length = 3570 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtg 396 ||||| || |||||||||||||||||||| Sbjct: 2509 tagaatttattctggaactccacccagtg 2481
>gb|AC109276.12| Mus musculus chromosome 1, clone RP23-461J11, complete sequence Length = 173589 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 195 aggggctggggttttatgatt 215 ||||||||||||||||||||| Sbjct: 47452 aggggctggggttttatgatt 47472
>ref|XM_954818.1| Neurospora crassa OR74A hypothetical protein (NCU02267.1) partial mRNA Length = 1821 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 242 ggcaacaaggccacccgcaag 262 ||||||||||||||||||||| Sbjct: 183 ggcaacaaggccacccgcaag 163
>ref|XM_331042.1| Neurospora crassa OR74A hypothetical protein (NCU02267.1) partial mRNA Length = 1821 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 242 ggcaacaaggccacccgcaag 262 ||||||||||||||||||||| Sbjct: 183 ggcaacaaggccacccgcaag 163
>ref|XM_759274.1| Theileria parva strain Muguga chromosome 4 vacuolar ATP synthase subunit A (TP04_0731) partial mRNA Length = 2811 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 369 agaacttgttctggaactccaccca 393 ||||||||||||||||||| ||||| Sbjct: 2731 agaacttgttctggaactcaaccca 2707
>ref|XM_948273.1| Theileria annulata strain Ankara vacuolar H+-ATPase, 116 kDa subunit (TA10280) partial mRNA Length = 2811 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 369 agaacttgttctggaactccaccca 393 ||||||||||||||||||| ||||| Sbjct: 2731 agaacttgttctggaactcaaccca 2707
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 tacccttcgtgtaatccacat 156 ||||||||||||||||||||| Sbjct: 3161371 tacccttcgtgtaatccacat 3161391
>ref|NM_031604.2| Rattus norvegicus ATPase, H+ transporting, lysosomal V0 subunit A1 (Atp6v0a1), mRNA Length = 4006 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtg 396 ||||| ||||||||||| ||||||||||| Sbjct: 2605 tagaatttgttctggaattccacccagtg 2577
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 tacccttcgtgtaatccacat 156 ||||||||||||||||||||| Sbjct: 3040344 tacccttcgtgtaatccacat 3040364
>emb|BX908789.1| Neurospora crassa DNA linkage group VII BAC clone B13D24 Length = 107482 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 242 ggcaacaaggccacccgcaag 262 ||||||||||||||||||||| Sbjct: 43798 ggcaacaaggccacccgcaag 43778
>gb|AC034259.7| Homo sapiens chromosome 11, clone RP11-138N3, complete sequence Length = 206192 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 368 tagaacttgttctggaactccaccc 392 ||||||||||||||||| ||||||| Sbjct: 34241 tagaacttgttctggaattccaccc 34265
>emb|BX294185.5| Zebrafish DNA sequence from clone CH211-232L14 in linkage group 24, complete sequence Length = 115427 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 368 tagaacttgttctggaactccaccc 392 ||||| ||||||||||||||||||| Sbjct: 49581 tagaatttgttctggaactccaccc 49605
>gb|AY973541.1|AY973542S2 Hyaloperonospora parasitica isolate Emoy2 clone BAC 12I13, SP6 end Length = 57064 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtg 396 ||||| ||||||||||| ||||||||||| Sbjct: 3906 tagaatttgttctggaattccacccagtg 3878
>gb|AC069014.21|AC069014 Mus musculus 11 BAC RP23-278K23 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 181557 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccaccc 392 ||||| ||||||||||||||||||| Sbjct: 126408 tagaatttgttctggaactccaccc 126384
>gb|DQ286424.1| Rattus norvegicus v-H+ATPase subunit a1-III mRNA, complete cds Length = 2499 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtg 396 ||||| ||||||||||| ||||||||||| Sbjct: 2429 tagaatttgttctggaattccacccagtg 2401
>gb|DQ286423.1| Rattus norvegicus v-H+ATPase subunit a1-II mRNA, complete cds Length = 2520 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtg 396 ||||| ||||||||||| ||||||||||| Sbjct: 2450 tagaatttgttctggaattccacccagtg 2422
>gb|DQ286422.1| Rattus norvegicus v-H+ATPase subunit a1-IV mRNA, complete cds Length = 2538 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtg 396 ||||| ||||||||||| ||||||||||| Sbjct: 2468 tagaatttgttctggaattccacccagtg 2440
>gb|DQ286421.1| Rattus norvegicus v-H+ATPase subunit a1-I mRNA, complete cds Length = 2517 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtg 396 ||||| ||||||||||| ||||||||||| Sbjct: 2447 tagaatttgttctggaattccacccagtg 2419
>gb|AY548972.1| Homo sapiens T-cell immune regulator 1 transcript variant 9 (TCIRG1) mRNA, partial sequence; alternatively spliced Length = 223 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccaccc 392 ||||||||||||||||| ||||||| Sbjct: 166 tagaacttgttctggaattccaccc 142
>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome Length = 4599354 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 tacccttcgtgtaatccacat 156 ||||||||||||||||||||| Sbjct: 2846307 tacccttcgtgtaatccacat 2846327
>dbj|AK208548.1| Mus musculus cDNA, clone:Y2G0111O18, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000044721, based on BLAT search Length = 165 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 374 ttgttctggaactccacccag 394 ||||||||||||||||||||| Sbjct: 29 ttgttctggaactccacccag 9
>emb|AJ289019.1|GGA289019 Gallus gallus mRNA for vacuolar H(+)-transporting ATPase 116 kDa subunit, a1 isoform (a1 gene) Length = 2648 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtg 396 |||||||||||||||||||| | |||||| Sbjct: 2503 tagaacttgttctggaactcgatccagtg 2475
>ref|XM_313509.2| Anopheles gambiae str. PEST ENSANGP00000022715 (ENSANGG00000000403), partial mRNA Length = 2981 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtg 396 |||||||| ||||||||||||||||||| Sbjct: 2474 tagaacttactctggaactccacccagtg 2446
>ref|XM_562586.1| Anopheles gambiae str. PEST ENSANGP00000027730 (ENSANGG00000000403), mRNA Length = 3297 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtg 396 |||||||| ||||||||||||||||||| Sbjct: 2604 tagaacttactctggaactccacccagtg 2576
>ref|XM_313510.2| Anopheles gambiae str. PEST ENSANGP00000000428 (ENSANGG00000000403), partial mRNA Length = 2612 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtg 396 |||||||| ||||||||||||||||||| Sbjct: 2533 tagaacttactctggaactccacccagtg 2505
>ref|NM_204724.1| Gallus gallus ATPase, H+ transporting, lysosomal V0 subunit A1 (ATP6V0A1), mRNA Length = 2601 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtg 396 |||||||||||||||||||| | |||||| Sbjct: 2503 tagaacttgttctggaactcgatccagtg 2475
>gb|AF033033.2|AF033033 Homo sapiens TIRC7 protein (TCIRG1) gene, complete cds Length = 12234 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccaccc 392 ||||||||||||||||| ||||||| Sbjct: 11788 tagaacttgttctggaattccaccc 11764
>emb|AL591425.4| Mouse DNA sequence from clone RP23-278K23 on chromosome 11, complete sequence Length = 75415 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccaccc 392 ||||| ||||||||||||||||||| Sbjct: 68422 tagaatttgttctggaactccaccc 68398
>ref|NM_212672.1| Danio rerio ATPase, H+ transporting, lysosomal V0 subunit a isoform 1 (atp6v0a1), mRNA Length = 3570 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtg 396 ||||| || |||||||||||||||||||| Sbjct: 2509 tagaatttattctggaactccacccagtg 2481
>gb|M58758.1|RATPRPU Rat proton pump polypeptide mRNA, complete cds Length = 3876 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtg 396 ||||| ||||||||||| ||||||||||| Sbjct: 2477 tagaatttgttctggaattccacccagtg 2449
>dbj|AP002807.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-802E16, complete sequences Length = 63433 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccaccc 392 ||||||||||||||||| ||||||| Sbjct: 22176 tagaacttgttctggaattccaccc 22152
>gb|AC149302.1| Solanum demissum chromosome 11 clone PGEC400L14 map MAP_LOC, complete sequence Length = 136874 Score = 40.1 bits (20), Expect = 5.8 Identities = 47/56 (83%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacccagtggagcctcaaggcatgaaggaatgcact 423 ||||||||||| || || || ||||| || || | ||| ||||||||||||||||| Sbjct: 95904 tagaacttgttttgaaattctacccaatgaagacgcaatgcatgaaggaatgcact 95849
>gb|AY973631.1| Oncidium Gower Ramsey phytoene synthase mRNA, complete cds Length = 1383 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 282 agatacaagaatttggacgagctc 305 |||||||||||||| ||||||||| Sbjct: 737 agatacaagaatttcgacgagctc 760
>ref|NM_204722.1| Gallus gallus T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein a isoform 3 (TCIRG1), mRNA Length = 2878 Score = 40.1 bits (20), Expect = 5.8 Identities = 41/48 (85%) Strand = Plus / Minus Query: 349 cttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 396 |||||| ||| ||||| | || ||||| ||||| |||||||||||||| Sbjct: 2665 cttgtagccagcacccacgtaaaacttattctgaaactccacccagtg 2618
>gb|DQ011154.1| Monkeypox virus strain Congo_2003_358, complete genome Length = 197195 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 148 aatccacatctaaagaaaaatgat 171 |||| ||||||||||||||||||| Sbjct: 33380 aatcaacatctaaagaaaaatgat 33403
>gb|AY496865.1| Oncidium cv. 'Gower Ramsey' phytoene synthase (PSY) mRNA, complete cds Length = 1576 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 282 agatacaagaatttggacgagctc 305 |||||||||||||| ||||||||| Sbjct: 781 agatacaagaatttcgacgagctc 804
>gb|AF497545.1| Homo sapiens T-cell immune regulator 1 transcript variant 3 (TCIRG1) mRNA, partial cds, alternatively spliced Length = 220 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 368 tagaacttgttctggaactccacc 391 ||||||||||||||||| |||||| Sbjct: 163 tagaacttgttctggaattccacc 140
>gb|AC020593.6| Homo sapiens BAC clone RP11-317G22 from 4, complete sequence Length = 184206 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 acatctaaagaaaaatgatg 172 |||||||||||||||||||| Sbjct: 163750 acatctaaagaaaaatgatg 163731
>gb|AC127684.5| Mus musculus BAC clone RP24-171J12 from chromosome 6, complete sequence Length = 178299 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 acatctaaagaaaaatgatg 172 |||||||||||||||||||| Sbjct: 26172 acatctaaagaaaaatgatg 26191
>emb|AJ289021.1|GGA289021 Gallus gallus mRNA for vacuolar H(+)-transporting ATPase 116 kDa subunit, a3 isoform (a3 gene) Length = 2878 Score = 40.1 bits (20), Expect = 5.8 Identities = 41/48 (85%) Strand = Plus / Minus Query: 349 cttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 396 |||||| ||| ||||| | || ||||| ||||| |||||||||||||| Sbjct: 2665 cttgtagccagcacccacgtaaaacttattctgaaactccacccagtg 2618
>gb|AC156277.6| Mus musculus 6 BAC RP24-309B5 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 152539 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 acatctaaagaaaaatgatg 172 |||||||||||||||||||| Sbjct: 127355 acatctaaagaaaaatgatg 127374 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,629,348 Number of Sequences: 3902068 Number of extensions: 3629348 Number of successful extensions: 60893 Number of sequences better than 10.0: 167 Number of HSP's better than 10.0 without gapping: 167 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 60574 Number of HSP's gapped (non-prelim): 316 length of query: 430 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 408 effective length of database: 17,147,199,772 effective search space: 6996057506976 effective search space used: 6996057506976 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
