ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl40b08 |
|---|---|
| Clone Library Name | barley_pub |
>CINA_CLOTE (Q898T5) CinA-like protein| Length = 409 Score = 28.1 bits (61), Expect = 5.5 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = +2 Query: 203 GTNKARKEGVLEKQAIQHFLSFLSTESSWGGVSSARLATWSG 328 GT+ EGV+ K I++ L + ES GG+ RL + G Sbjct: 251 GTDSDTLEGVIGKFLIENNLYIATAESCTGGLLCGRLVNYPG 292
>Y923_METJA (Q58333) Hypothetical protein MJ0923| Length = 297 Score = 27.3 bits (59), Expect = 9.3 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = -3 Query: 270 RKERKCCIACFSKTPSFLALFVPF 199 RK+RK F T SFL +F+PF Sbjct: 8 RKDRKMLFLMFIGTVSFLFIFIPF 31
>SLYX_SHISS (Q3YWS4) Protein slyX| Length = 72 Score = 27.3 bits (59), Expect = 9.3 Identities = 11/18 (61%), Positives = 15/18 (83%) Frame = -3 Query: 342 LGASRPDHVARRAEETPP 289 L AS+P ++A +AEETPP Sbjct: 52 LKASQPSNIASQAEETPP 69
>SLYX_SHIFL (Q83PY1) Protein slyX| Length = 72 Score = 27.3 bits (59), Expect = 9.3 Identities = 11/18 (61%), Positives = 15/18 (83%) Frame = -3 Query: 342 LGASRPDHVARRAEETPP 289 L AS+P ++A +AEETPP Sbjct: 52 LKASQPSNIASQAEETPP 69
>SLYX_SHIDS (Q32B18) Protein slyX| Length = 72 Score = 27.3 bits (59), Expect = 9.3 Identities = 11/18 (61%), Positives = 15/18 (83%) Frame = -3 Query: 342 LGASRPDHVARRAEETPP 289 L AS+P ++A +AEETPP Sbjct: 52 LKASQPSNIASQAEETPP 69
>SLYX_SHIBS (Q31VU2) Protein slyX| Length = 72 Score = 27.3 bits (59), Expect = 9.3 Identities = 11/18 (61%), Positives = 15/18 (83%) Frame = -3 Query: 342 LGASRPDHVARRAEETPP 289 L AS+P ++A +AEETPP Sbjct: 52 LKASQPSNIASQAEETPP 69
>SLYX_SALTY (Q8ZLL5) Protein slyX| Length = 72 Score = 27.3 bits (59), Expect = 9.3 Identities = 11/18 (61%), Positives = 15/18 (83%) Frame = -3 Query: 342 LGASRPDHVARRAEETPP 289 L AS+P ++A +AEETPP Sbjct: 52 LKASQPSNIASQAEETPP 69
>SLYX_SALTI (Q8Z1Y5) Protein slyX| Length = 72 Score = 27.3 bits (59), Expect = 9.3 Identities = 11/18 (61%), Positives = 15/18 (83%) Frame = -3 Query: 342 LGASRPDHVARRAEETPP 289 L AS+P ++A +AEETPP Sbjct: 52 LKASQPSNIASQAEETPP 69
>SLYX_SALPA (Q5PL24) Protein slyX| Length = 67 Score = 27.3 bits (59), Expect = 9.3 Identities = 11/18 (61%), Positives = 15/18 (83%) Frame = -3 Query: 342 LGASRPDHVARRAEETPP 289 L AS+P ++A +AEETPP Sbjct: 47 LKASQPSNIASQAEETPP 64
>SLYX_SALCH (Q57J18) Protein slyX| Length = 72 Score = 27.3 bits (59), Expect = 9.3 Identities = 11/18 (61%), Positives = 15/18 (83%) Frame = -3 Query: 342 LGASRPDHVARRAEETPP 289 L AS+P ++A +AEETPP Sbjct: 52 LKASQPSNIASQAEETPP 69
>SLYX_ECOLI (P0A8R4) Protein slyX| Length = 72 Score = 27.3 bits (59), Expect = 9.3 Identities = 11/18 (61%), Positives = 15/18 (83%) Frame = -3 Query: 342 LGASRPDHVARRAEETPP 289 L AS+P ++A +AEETPP Sbjct: 52 LKASQPSNIASQAEETPP 69
>SLYX_ECOL6 (P0A8R5) Protein slyX| Length = 72 Score = 27.3 bits (59), Expect = 9.3 Identities = 11/18 (61%), Positives = 15/18 (83%) Frame = -3 Query: 342 LGASRPDHVARRAEETPP 289 L AS+P ++A +AEETPP Sbjct: 52 LKASQPSNIASQAEETPP 69
>SLYX_ECO57 (P0A8R6) Protein slyX| Length = 72 Score = 27.3 bits (59), Expect = 9.3 Identities = 11/18 (61%), Positives = 15/18 (83%) Frame = -3 Query: 342 LGASRPDHVARRAEETPP 289 L AS+P ++A +AEETPP Sbjct: 52 LKASQPSNIASQAEETPP 69
>P3C2G_RAT (O70173) Phosphatidylinositol-4-phosphate 3-kinase C2| domain-containing gamma polypeptide (EC 2.7.1.154) (Phosphoinositide 3-Kinase-C2-gamma) (PtdIns-3-kinase C2 gamma) (PI3K-C2gamma) Length = 1505 Score = 27.3 bits (59), Expect = 9.3 Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 3/39 (7%) Frame = -3 Query: 318 VARRAEETPPQEDSVERKER---KCCIACFSKTPSFLAL 211 +AR A +TPPQE V K R + I FSKT S L L Sbjct: 1244 LARPAPQTPPQECCVLNKTRTIQRVTILGFSKTHSNLYL 1282
>FIBP_ADEB3 (Q03553) Fiber protein (pIV)| Length = 976 Score = 27.3 bits (59), Expect = 9.3 Identities = 13/29 (44%), Positives = 14/29 (48%) Frame = +2 Query: 275 TESSWGGVSSARLATWSGRLAPRSLFLLS 361 TE+ W G S TW G AP S LS Sbjct: 800 TETLWTGTGSNANVTWRGYTAPGSKLFLS 828
>Y1262_AQUAE (O67301) Hypothetical lipoprotein aq_1262 precursor| Length = 564 Score = 27.3 bits (59), Expect = 9.3 Identities = 9/29 (31%), Positives = 18/29 (62%) Frame = +2 Query: 11 PILFMIIHSCAAGVTRTKKMLRQKRRHVP 97 P+L +++SC G + +K+ + K+ H P Sbjct: 13 PVLLSLLYSCGTGGSASKEEILSKKEHNP 41
>PT494_SACBA (O59961) COX3 mRNA-specific translational activator PET494| Length = 489 Score = 27.3 bits (59), Expect = 9.3 Identities = 14/45 (31%), Positives = 22/45 (48%) Frame = -3 Query: 309 RAEETPPQEDSVERKERKCCIACFSKTPSFLALFVPFSALLFDST 175 R E+ P +++ + E+K C SK LAL S + DS+ Sbjct: 445 RDEDRSPVLNTIPQAEKKTCYQILSKNRDILALLKRISDIQIDSS 489
>GLPC_ECOLI (P0A996) Anaerobic glycerol-3-phosphate dehydrogenase subunit C| (G-3-P dehydrogenase) Length = 396 Score = 27.3 bits (59), Expect = 9.3 Identities = 18/57 (31%), Positives = 30/57 (52%) Frame = -3 Query: 237 SKTPSFLALFVPFSALLFDSTSQVEPHSLIDQDLHLIVRDSL*RSSRGTCRRFCRSI 67 S T ++ PF+ ++ +TS L+D L + R +L + S GT RR+ RS+ Sbjct: 96 SHTDLMGSVSTPFAPIVNTATSLKPVRQLLDAALKIDHRRTLPKYSFGTFRRWYRSV 152
>GLPC_ECO57 (P0A997) Anaerobic glycerol-3-phosphate dehydrogenase subunit C| (G-3-P dehydrogenase) Length = 396 Score = 27.3 bits (59), Expect = 9.3 Identities = 18/57 (31%), Positives = 30/57 (52%) Frame = -3 Query: 237 SKTPSFLALFVPFSALLFDSTSQVEPHSLIDQDLHLIVRDSL*RSSRGTCRRFCRSI 67 S T ++ PF+ ++ +TS L+D L + R +L + S GT RR+ RS+ Sbjct: 96 SHTDLMGSVSTPFAPIVNTATSLKPVRQLLDAALKIDHRRTLPKYSFGTFRRWYRSV 152 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,729,171 Number of Sequences: 219361 Number of extensions: 637435 Number of successful extensions: 1868 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 1828 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1867 length of database: 80,573,946 effective HSP length: 98 effective length of database: 59,076,568 effective search space used: 1417837632 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
