>emb|BX842643.1| Mycoplasma mycoides subsp. mycoides SC genomic DNA, complete sequence;
             segment 2/4
          Length = 346939

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 17    ctattgaatcatcaacacatgaa 39
             |||||||||||||||||||||||
Sbjct: 82024 ctattgaatcatcaacacatgaa 82046

>gb|AC137623.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0426G01,
              complete sequence
          Length = 173074

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 46/53 (86%), Gaps = 1/53 (1%)
 Strand = Plus / Minus

                                                                   
Query: 98     gttcttcagctaaaagctcaaatttatttcaggtatttacagcgttctaggta 150
              |||| ||||| |||||||| | |||||||||||||| ||||  ||||||||||
Sbjct: 155782 gttcatcagccaaaagctcca-tttatttcaggtatatacaatgttctaggta 155731

>ref|XM_414507.1| PREDICTED: Gallus gallus similar to Gamma-aminobutyric-acid receptor
            pi subunit precursor (GABA(A) receptor) (LOC416174), mRNA
          Length = 2433

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 148  gtagtagtaattcttaaggca 168
            |||||||||||||||||||||
Sbjct: 1562 gtagtagtaattcttaaggca 1542

>gb|AC124836.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0092E21, complete sequence
          Length = 132649

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 46/53 (86%), Gaps = 1/53 (1%)
 Strand = Plus / Minus

                                                                  
Query: 98    gttcttcagctaaaagctcaaatttatttcaggtatttacagcgttctaggta 150
             |||| ||||| |||||||| | |||||||||||||| ||||  ||||||||||
Sbjct: 27516 gttcatcagccaaaagctcca-tttatttcaggtatatacaatgttctaggta 27465

>gb|AC159814.2| Mus musculus BAC clone RP23-389H15 from chromosome 12, complete
             sequence
          Length = 209280

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 50    aggtggagaagcactccccta 70
             |||||||||||||||||||||
Sbjct: 55352 aggtggagaagcactccccta 55372

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 46/53 (86%), Gaps = 1/53 (1%)
 Strand = Plus / Minus

                                                                     
Query: 98       gttcttcagctaaaagctcaaatttatttcaggtatttacagcgttctaggta 150
                |||| ||||| |||||||| | |||||||||||||| ||||  ||||||||||
Sbjct: 20484037 gttcatcagccaaaagctcca-tttatttcaggtatatacaatgttctaggta 20483986

>dbj|AK070104.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023045K24, full
            insert sequence
          Length = 3603

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 46/53 (86%), Gaps = 1/53 (1%)
 Strand = Plus / Minus

                                                                 
Query: 98   gttcttcagctaaaagctcaaatttatttcaggtatttacagcgttctaggta 150
            |||| ||||| |||||||| | |||||||||||||| ||||  ||||||||||
Sbjct: 3596 gttcatcagccaaaagctcca-tttatttcaggtatatacaatgttctaggta 3545

>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome
          Length = 4222334

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 95      agcgttcttcagctaaaagc 114
               ||||||||||||||||||||
Sbjct: 3757404 agcgttcttcagctaaaagc 3757385

>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome
          Length = 4222645

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 95      agcgttcttcagctaaaagc 114
               ||||||||||||||||||||
Sbjct: 3757566 agcgttcttcagctaaaagc 3757547

>gb|AC124339.9| Mus musculus chromosome 7, clone RP24-238P16, complete sequence
          Length = 163620

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 204    gtaggtacacaacactacta 223
              ||||||||||||||||||||
Sbjct: 158708 gtaggtacacaacactacta 158689

>gb|AC119412.16| Medicago truncatula clone mth2-31d18, complete sequence
          Length = 120757

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 17    ctattgaatcatcaacacatgaac 40
             ||||||||||||||| ||||||||
Sbjct: 76616 ctattgaatcatcaagacatgaac 76639

>gb|AE017245.1| Mycoplasma synoviae 53, complete genome
          Length = 799476

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 108    taaaagctcaaatttatttc 127
              ||||||||||||||||||||
Sbjct: 542850 taaaagctcaaatttatttc 542831

>emb|BX324164.15| Zebrafish DNA sequence from clone DKEY-14D8 in linkage group 4
            Contains the gene for a novel protein similar to
            vertebrate selenoprotein family, the gene for a novel
            protein similar to vertebrate vascular endothelial growth
            factor (VEGF), the gene for a novel protein similar to
            vertebrate mitogen-activated protein kinase family, the
            gene for a novel protein similar to vertebrate
            mitogen-activated protein kinase family, the gene for a
            novel protein similar to vertebrate scavenger receptor
            protein, two genes for novel proteins similar to
            vertebrate protein deleted in malignant brain tumors 1,
            fifteen novel genes and three CpG islands, complete
            sequence
          Length = 264155

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 106  gctaaaagctcaaatttatt 125
            ||||||||||||||||||||
Sbjct: 5966 gctaaaagctcaaatttatt 5947

>ref|XM_341769.2| PREDICTED: Rattus norvegicus similar to hypothetical protein
           FLJ32191 (LOC361490), mRNA
          Length = 1227

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 12  tacatctattgaatcatcaa 31
           ||||||||||||||||||||
Sbjct: 447 tacatctattgaatcatcaa 466

>emb|BX510916.7| Zebrafish DNA sequence from clone DKEY-208B17 in linkage group 5,
              complete sequence
          Length = 174866

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 210    acacaacactactacggtta 229
              ||||||||||||||||||||
Sbjct: 126569 acacaacactactacggtta 126588

>gb|AC099719.9| Mus musculus chromosome 7, clone RP23-394F19, complete sequence
          Length = 215718

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 204  gtaggtacacaacactacta 223
            ||||||||||||||||||||
Sbjct: 6186 gtaggtacacaacactacta 6167

>gb|AC171647.3| Rhesus Macaque  BAC CH250-482O21 (Children's Hospital Oakland Research
             Institute Rhesus macaque Adult Male BAC Library) complete
             sequence
          Length = 123862

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 151   gtagtaattcttaaggcagt 170
             ||||||||||||||||||||
Sbjct: 82246 gtagtaattcttaaggcagt 82265

>emb|AL929457.12| Zebrafish DNA sequence from clone CH211-153I8 in linkage group 14,
              complete sequence
          Length = 164299

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 210    acacaacactactacggtta 229
              ||||||||||||||||||||
Sbjct: 111136 acacaacactactacggtta 111155

>emb|CR759821.9| Zebrafish DNA sequence from clone DKEY-190C14 in linkage group 5,
              complete sequence
          Length = 169089

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 210    acacaacactactacggtta 229
              ||||||||||||||||||||
Sbjct: 113020 acacaacactactacggtta 113039

>emb|BX510330.20| Zebrafish DNA sequence from clone DKEYP-82B3 in linkage group 13,
            complete sequence
          Length = 96887

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 210  acacaacactactacggtta 229
            ||||||||||||||||||||
Sbjct: 7293 acacaacactactacggtta 7312


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,864,767
Number of Sequences: 3902068
Number of extensions: 1864767
Number of successful extensions: 41275
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 41219
Number of HSP's gapped (non-prelim): 56
length of query: 244
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 222
effective length of database: 17,147,199,772
effective search space: 3806678349384
effective search space used: 3806678349384
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)