>GCP4_ARATH (Q9M350) Gamma-tubulin complex component 4 homolog|
          Length = 745

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = -3

Query: 275 AAWQHGNH-DLQKRREDGEQGPFAQQTRKWKMEMTRLTFHIAHFLSSICISVQVD 114
           A+  H +H +  + R+DG  G  +QQ R+    M R+  H+A  + ++   +QVD
Sbjct: 553 ASVMHQDHIESAQHRKDGLNGSTSQQRRQGIRPMWRVREHMAFLIRNLQFYIQVD 607

>R1AB_BSCR3 (Q3I5J6) Replicase polyprotein 1ab (pp1ab) (ORF1AB) [Includes:|
            Replicase polyprotein 1a (pp1a) (ORF1A)] [Contains:
            Leader protein; p65 homolog; NSP1 (EC 3.4.22.-)
            (Papain-like proteinase) (PL-PRO); 3C-like proteinase (EC
            3.4.22.-) (3CL-PRO) (3
          Length = 7071

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = -3

Query: 254  HDLQKRREDGEQGPFAQQTRKWKMEMTRLTFHIAHFLSSIC 132
            HD  K R DG+  P   + R  K  M  L + + HF    C
Sbjct: 4466 HDFFKFRVDGDMVPHISRQRLTKYTMADLVYALRHFDEGNC 4506

>R1AB_CVHSA (P59641) Replicase polyprotein 1ab (pp1ab) (ORF1AB) [Includes:|
            Replicase polyprotein 1a (pp1a) (ORF1A)] [Contains:
            Leader protein; p65 homolog; NSP1 (EC 3.4.22.-)
            (Papain-like proteinase) (PL-PRO); 3C-like proteinase (EC
            3.4.22.-) (3CL-PRO) (3
          Length = 7073

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = -3

Query: 254  HDLQKRREDGEQGPFAQQTRKWKMEMTRLTFHIAHFLSSIC 132
            HD  K R DG+  P   + R  K  M  L + + HF    C
Sbjct: 4468 HDFFKFRVDGDMVPHISRQRLTKYTMADLVYALRHFDEGNC 4508

>BHLH3_RAT (O35779) Class B basic helix-loop-helix protein 3 (bHLHB3)|
           (Enhancer-of-split and hairy-related protein 1)
           (SHARP-1)
          Length = 410

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -2

Query: 297 ASLLAHLSGMAAWKP*PAETKGRWRARAVCSADQEMENGND 175
           A L++HL  +A     P  T GR   RA CSA     +G++
Sbjct: 160 AQLVSHLHAVATQLLTPQVTPGRGPGRAPCSAGAAAASGSE 200

>MAUG_METFL (Q50426) Methylamine utilization protein mauG precursor|
          Length = 333

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -1

Query: 274 RHGSMETMTCRNEGKMASKGRLLSRPGNG 188
           R GSM   TC N G   S GR+L    +G
Sbjct: 63  RDGSMSCATCHNPGMRWSDGRILPLRADG 91


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,994,656
Number of Sequences: 219361
Number of extensions: 861403
Number of successful extensions: 1765
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1765
length of database: 80,573,946
effective HSP length: 93
effective length of database: 60,173,373
effective search space used: 1444160952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)