>RDRP_BPMS2 (P00585) RNA-directed RNA polymerase beta chain (EC 2.7.7.48) (RNA|
           replicase beta chain)
          Length = 544

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +3

Query: 78  LISVYKSGLFTKCTVYNWEPLTHK 149
           L+S Y+S LF +CT  N  P+ HK
Sbjct: 114 LLSGYRSSLFGQCTFSNGAPMGHK 137

>PSBFL_PROMA (Q7VAG9) PsbF-like protein|
          Length = 96

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +2

Query: 44  LVCRFNIIFYMSYFCLQVWAIYKMYRIQLGTIDTQTWD 157
           L+  F+ IF++SY     W ++K    QLG  + Q W+
Sbjct: 13  LIAAFSTIFWLSY-----WGVFKWEDNQLGFENYQDWE 45


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,354,534
Number of Sequences: 219361
Number of extensions: 532921
Number of successful extensions: 1257
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1256
length of database: 80,573,946
effective HSP length: 41
effective length of database: 71,580,145
effective search space used: 1717923480
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)