ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl40a07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NCPR_PHACH (Q9HDG2) NADPH--cytochrome P450 reductase (EC 1.6.2.4... 30 2.1
2Y1397_METJA (Q58792) Hypothetical protein MJ1397 precursor 29 3.7

>NCPR_PHACH (Q9HDG2) NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR)|
           (P450R)
          Length = 736

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +3

Query: 51  PSSKAVTKGRPNRREKTAKTEEGQKRSI 134
           PSSKA   G  N R+  AK +EG+KR +
Sbjct: 40  PSSKAAAGGNGNPRDFIAKMKEGKKRIV 67



to top

>Y1397_METJA (Q58792) Hypothetical protein MJ1397 precursor|
          Length = 486

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 16/68 (23%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
 Frame = +3

Query: 33  QTSDYDPSSKAVTKGRPNRREKTAKTEEGQKRSIFTVNRAFPQIQWPLL----FSKTISE 200
           +  + + SSK + + + +++E+ ++T+E +K S   +N+   + ++PL+    F K  + 
Sbjct: 308 EEKENEESSKTINQMQRHKKEEKSQTQETKKPSKNEMNKQEKERKYPLIIEEKFKKVAAA 367

Query: 201 NATLQSAS 224
            AT+ + S
Sbjct: 368 IATVTTTS 375


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,441,731
Number of Sequences: 219361
Number of extensions: 588068
Number of successful extensions: 1728
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1725
length of database: 80,573,946
effective HSP length: 59
effective length of database: 67,631,647
effective search space used: 1623159528
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top