ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl40a03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479924.1| Oryza sativa (japonica cultivar-group), mRNA 258 1e-65
2dbj|AK102166.1| Oryza sativa (japonica cultivar-group) cDNA clon... 258 1e-65
3dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 163 6e-37
4dbj|AP004591.3| Oryza sativa (japonica cultivar-group) genomic D... 163 6e-37
5dbj|AK099132.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 6e-09
6dbj|AK072914.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 6e-09
7dbj|AK062121.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 6e-09
8ref|NM_117970.3| Arabidopsis thaliana unknown protein AT4G18570 ... 54 4e-04
9gb|AY128285.1| Arabidopsis thaliana AT4g18560/F28J12_220 mRNA, c... 54 4e-04
10emb|BX826449.1|CNS0A49I Arabidopsis thaliana Full-length cDNA Co... 54 4e-04
11gb|BT004523.1| Arabidopsis thaliana At4g18560/F28J12_220 gene, c... 54 4e-04
12gb|AC149426.1| Populus trichocarpa clone Pop1-053A03, complete s... 46 0.089
13gb|AC149425.1| Populus trichocarpa clone Pop1-041F22, complete s... 46 0.089
14gb|AC149424.1| Populus trichocarpa clone Pop1-011N15, complete s... 46 0.089
15gb|AC122746.7| Mus musculus chromosome 17, clone RP23-144A20, co... 46 0.089
16emb|AL161549.2|ATCHRIV49 Arabidopsis thaliana DNA chromosome 4, ... 46 0.089
17emb|AL021710.1|ATF28J12 Arabidopsis thaliana DNA chromosome 4, B... 46 0.089
18gb|AC155242.2| Mus musculus BAC clone RP24-496G24 from chromosom... 46 0.089
19gb|AY107994.1| Zea mays PCO117356 mRNA sequence 46 0.089
20ref|NM_113468.3| Arabidopsis thaliana CHUP1 (CHLOROPLAST UNUSUAL... 44 0.35
21gb|AC068066.3| Mus musculus strain C57BL6/J chromosome 6 clone R... 44 0.35
22gb|AC121497.15| Mus musculus chromosome 6, clone RP23-2M23, comp... 44 0.35
23dbj|AB087408.1| Arabidopsis thaliana CHUP1 mRNA for actin bindin... 44 0.35
24gb|AC102914.9| Mus musculus chromosome 15, clone RP24-274M4, com... 42 1.4
25gb|AC161193.3| Mus musculus chromosome 8, clone RP23-308L22, com... 42 1.4
26gb|AF384675.1| Mus musculus FGF15 (Fgf15) gene, complete cds; BC... 42 1.4
27gb|AC112964.8| Mus musculus chromosome 8, clone RP24-82M4, compl... 42 1.4
28gb|AC166079.2| Mus musculus BAC clone RP23-51L15 from chromosome... 42 1.4
29gb|AC142211.3| Mus musculus BAC clone RP24-501B23 from chromosom... 42 1.4
30gb|AC140471.2| Mus musculus BAC clone RP24-400H5 from chromosome... 42 1.4
31gb|AC127573.4| Mus musculus BAC clone RP24-231H7 from chromosome... 42 1.4
32gb|AC123804.3| Mus musculus BAC clone RP24-140B5 from chromosome... 42 1.4
33gb|AC125354.4| Mus musculus BAC clone RP23-302B8 from 8, complet... 42 1.4
34emb|AL022153.1|HS23K20 Human DNA sequence from clone RP1-23K20 o... 42 1.4
35gb|AC165271.2| Mus musculus BAC clone RP24-424G16 from chromosom... 42 1.4
36gb|AC161763.3| Mus musculus BAC clone RP23-294B14 from chromosom... 42 1.4
37gb|AC099818.2| Homo sapiens chromosome 8, clone RP11-99I9, compl... 42 1.4
38gb|AC021733.12| Homo sapiens chromosome 8, clone RP11-775B15, co... 42 1.4
39dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
40dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
41gb|AC134339.6| Mus musculus BAC clone RP23-5F21 from 8, complete... 42 1.4
42gb|AC123621.10| Mus musculus chromosome 19, clone RP23-74D13, co... 42 1.4
43gb|AC166165.3| Mus musculus BAC clone RP23-381I17 from chromosom... 42 1.4
44gb|AC132232.6| Mus musculus BAC clone RP24-489N16 from chromosom... 42 1.4
45gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
46gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
47dbj|AP003153.1| Mus musculus genomic DNA, chromosome 16q clone:R... 42 1.4
48dbj|AP003152.1| Mus musculus genomic DNA, chromosome 16q clone:R... 42 1.4
49emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa... 42 1.4
50emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa... 42 1.4
51emb|BX000491.1|CNS08CDH Oryza sativa chromosome 12, . BAC OSJNBb... 42 1.4
52emb|BX248320.3| Zebrafish DNA sequence from clone CH211-146A1 in... 42 1.4
53gb|AC165248.2| Mus musculus BAC clone RP24-219D2 from chromosome... 42 1.4
54gb|AC163288.4| Mus musculus BAC clone RP23-279M5 from chromosome... 42 1.4
55gb|AC114653.11| Mus musculus chromosome 5, clone RP24-158G19, co... 40 5.5
56gb|AC068608.5| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 5.5
57gb|AC129216.4| Mus musculus BAC clone RP24-446C11 from chromosom... 40 5.5
58gb|AC122356.4| Mus musculus BAC clone RP23-401P15 from chromosom... 40 5.5
59ref|XM_814945.1| Trypanosoma cruzi strain CL Brener dynein heavy... 40 5.5
60gb|AC116592.5| Mus musculus BAC clone RP24-90K3 from 2, complete... 40 5.5
61gb|AC005084.2| Homo sapiens BAC clone CTA-298G8 from 7, complete... 40 5.5
62emb|AL360297.12| Human DNA sequence from clone RP11-386O9 on chr... 40 5.5
63emb|AL122004.17|HSJ678E16 Human DNA sequence from clone RP4-678E... 40 5.5
64gb|AF155220.1| Onchocerca volvulus fructose 1,6 bisphosphate ald... 40 5.5
65emb|BX664607.21| Zebrafish DNA sequence from clone CH211-132B12 ... 40 5.5
66gb|AC114614.9| Mus musculus chromosome 5, clone RP24-81J14, comp... 40 5.5
67dbj|AK113560.1| Ciona intestinalis cDNA, clone:ciad073f05, full ... 40 5.5
68gb|U49864.1|CRU49864 Chlamydomonas reinhardtii plus mating struc... 40 5.5
69gb|AC127589.4| Mus musculus BAC clone RP23-134K6 from 5, complet... 40 5.5
70emb|AL845529.10| Mouse DNA sequence from clone RP23-276D17 on ch... 40 5.5
71gb|U96178.1|OVU96178 Onchocerca volvulus fructose-bisphosphate a... 40 5.5
72gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete ge... 40 5.5 
>ref|XM_479924.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3034

 Score =  258 bits (130), Expect = 1e-65
 Identities = 190/210 (90%)
 Strand = Plus / Minus

                                                                        
Query: 200  cttcctactgggtactgttcctaacatgaacaagattcctcagctcctcaaatgcatcca 259
            ||||||||||||| ||||| || ||||| ||||||||||||||||| |||||||||||||
Sbjct: 2809 cttcctactgggtgctgtttctgacatgcacaagattcctcagctcttcaaatgcatcca 2750

                                                                        
Query: 260  tggtctctgtgtcaaatcctccggcaaactgatgaattctgaaggcaaatctcacagcct 319
            |||||||||  || ||||| || ||||||||||| |||||||||||||||||||||||||
Sbjct: 2749 tggtctctggatcgaatcccccagcaaactgatgcattctgaaggcaaatctcacagcct 2690

                                                                        
Query: 320  gaagcagcatgtactccagagctaggtccttgttcagaggtcccatgtactgaagctcca 379
            |||| ||||| ||||||| |||| | || |||||||||||||||||||| ||||| ||||
Sbjct: 2689 gaagtagcatatactccaaagctggatctttgttcagaggtcccatgtattgaagttcca 2630

                                          
Query: 380  tagcaactcttttcatgtacatatttgcta 409
            |||||||||||||||||||||| |||||||
Sbjct: 2629 tagcaactcttttcatgtacatctttgcta 2600
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>dbj|AK102166.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086H09, full
            insert sequence
          Length = 3034

 Score =  258 bits (130), Expect = 1e-65
 Identities = 190/210 (90%)
 Strand = Plus / Minus

                                                                        
Query: 200  cttcctactgggtactgttcctaacatgaacaagattcctcagctcctcaaatgcatcca 259
            ||||||||||||| ||||| || ||||| ||||||||||||||||| |||||||||||||
Sbjct: 2809 cttcctactgggtgctgtttctgacatgcacaagattcctcagctcttcaaatgcatcca 2750

                                                                        
Query: 260  tggtctctgtgtcaaatcctccggcaaactgatgaattctgaaggcaaatctcacagcct 319
            |||||||||  || ||||| || ||||||||||| |||||||||||||||||||||||||
Sbjct: 2749 tggtctctggatcgaatcccccagcaaactgatgcattctgaaggcaaatctcacagcct 2690

                                                                        
Query: 320  gaagcagcatgtactccagagctaggtccttgttcagaggtcccatgtactgaagctcca 379
            |||| ||||| ||||||| |||| | || |||||||||||||||||||| ||||| ||||
Sbjct: 2689 gaagtagcatatactccaaagctggatctttgttcagaggtcccatgtattgaagttcca 2630

                                          
Query: 380  tagcaactcttttcatgtacatatttgcta 409
            |||||||||||||||||||||| |||||||
Sbjct: 2629 tagcaactcttttcatgtacatctttgcta 2600
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  163 bits (82), Expect = 6e-37
 Identities = 112/122 (91%)
 Strand = Plus / Plus

                                                                           
Query: 288     ctgatgaattctgaaggcaaatctcacagcctgaagcagcatgtactccagagctaggtc 347
               |||||| ||||||||||||||||||||||||||||| ||||| ||||||| |||| | ||
Sbjct: 1647583 ctgatgcattctgaaggcaaatctcacagcctgaagtagcatatactccaaagctggatc 1647642

                                                                           
Query: 348     cttgttcagaggtcccatgtactgaagctccatagcaactcttttcatgtacatatttgc 407
                |||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 1647643 tttgttcagaggtcccatgtattgaagttccatagcaactcttttcatgtacatctttgc 1647702

                 
Query: 408     ta 409
               ||
Sbjct: 1647703 ta 1647704



 Score =  101 bits (51), Expect = 2e-18
 Identities = 81/91 (89%)
 Strand = Plus / Plus

                                                                           
Query: 200     cttcctactgggtactgttcctaacatgaacaagattcctcagctcctcaaatgcatcca 259
               ||||||||||||| ||||| || ||||| ||||||||||||||||| |||||||||||||
Sbjct: 1647164 cttcctactgggtgctgtttctgacatgcacaagattcctcagctcttcaaatgcatcca 1647223

                                              
Query: 260     tggtctctgtgtcaaatcctccggcaaactg 290
               |||||||||  || ||||| || ||||||||
Sbjct: 1647224 tggtctctggatcgaatcccccagcaaactg 1647254
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>dbj|AP004591.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0582D05
          Length = 150483

 Score =  163 bits (82), Expect = 6e-37
 Identities = 112/122 (91%)
 Strand = Plus / Plus

                                                                         
Query: 288   ctgatgaattctgaaggcaaatctcacagcctgaagcagcatgtactccagagctaggtc 347
             |||||| ||||||||||||||||||||||||||||| ||||| ||||||| |||| | ||
Sbjct: 47083 ctgatgcattctgaaggcaaatctcacagcctgaagtagcatatactccaaagctggatc 47142

                                                                         
Query: 348   cttgttcagaggtcccatgtactgaagctccatagcaactcttttcatgtacatatttgc 407
              |||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 47143 tttgttcagaggtcccatgtattgaagttccatagcaactcttttcatgtacatctttgc 47202

               
Query: 408   ta 409
             ||
Sbjct: 47203 ta 47204



 Score =  101 bits (51), Expect = 2e-18
 Identities = 81/91 (89%)
 Strand = Plus / Plus

                                                                         
Query: 200   cttcctactgggtactgttcctaacatgaacaagattcctcagctcctcaaatgcatcca 259
             ||||||||||||| ||||| || ||||| ||||||||||||||||| |||||||||||||
Sbjct: 46664 cttcctactgggtgctgtttctgacatgcacaagattcctcagctcttcaaatgcatcca 46723

                                            
Query: 260   tggtctctgtgtcaaatcctccggcaaactg 290
             |||||||||  || ||||| || ||||||||
Sbjct: 46724 tggtctctggatcgaatcccccagcaaactg 46754
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>dbj|AK099132.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023051M04, full
            insert sequence
          Length = 3065

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                       
Query: 270  gtcaaatcctccggcaaactgatgaattctgaaggcaaatctcacagcctgaagcagca 328
            |||||| ||||||||||||||||||| || ||| |||||||||||| ||||||| ||||
Sbjct: 2803 gtcaaagcctccggcaaactgatgaactcggaaagcaaatctcacaccctgaagaagca 2745
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>dbj|AK072914.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150I16, full
            insert sequence
          Length = 3183

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                       
Query: 270  gtcaaatcctccggcaaactgatgaattctgaaggcaaatctcacagcctgaagcagca 328
            |||||| ||||||||||||||||||| || ||| |||||||||||| ||||||| ||||
Sbjct: 2918 gtcaaagcctccggcaaactgatgaactcggaaagcaaatctcacaccctgaagaagca 2860
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>dbj|AK062121.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-D01, full
            insert sequence
          Length = 1478

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                       
Query: 270  gtcaaatcctccggcaaactgatgaattctgaaggcaaatctcacagcctgaagcagca 328
            |||||| ||||||||||||||||||| || ||| |||||||||||| ||||||| ||||
Sbjct: 1216 gtcaaagcctccggcaaactgatgaactcggaaagcaaatctcacaccctgaagaagca 1158
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>ref|NM_117970.3| Arabidopsis thaliana unknown protein AT4G18570 mRNA, complete cds
          Length = 2309

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                   
Query: 241  agctcctcaaatgcatccatggtctctgtgtcaaatcctccggcaaactgatgaa 295
            ||||| |||||||| | ||| || ||||  |||||||||||||||||||||||||
Sbjct: 2065 agctcttcaaatgccttcattgtttctgcatcaaatcctccggcaaactgatgaa 2011
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>gb|AY128285.1| Arabidopsis thaliana AT4g18560/F28J12_220 mRNA, complete cds
          Length = 2134

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                   
Query: 241  agctcctcaaatgcatccatggtctctgtgtcaaatcctccggcaaactgatgaa 295
            ||||| |||||||| | ||| || ||||  |||||||||||||||||||||||||
Sbjct: 1890 agctcttcaaatgccttcattgtttctgcatcaaatcctccggcaaactgatgaa 1836
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>emb|BX826449.1|CNS0A49I Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB27ZF11 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 2022

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                   
Query: 241  agctcctcaaatgcatccatggtctctgtgtcaaatcctccggcaaactgatgaa 295
            ||||| |||||||| | ||| || ||||  |||||||||||||||||||||||||
Sbjct: 1906 agctcttcaaatgccttcattgtttctgcatcaaatcctccggcaaactgatgaa 1852
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>gb|BT004523.1| Arabidopsis thaliana At4g18560/F28J12_220 gene, complete cds
          Length = 1929

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                   
Query: 241  agctcctcaaatgcatccatggtctctgtgtcaaatcctccggcaaactgatgaa 295
            ||||| |||||||| | ||| || ||||  |||||||||||||||||||||||||
Sbjct: 1844 agctcttcaaatgccttcattgtttctgcatcaaatcctccggcaaactgatgaa 1790
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>gb|AC149426.1| Populus trichocarpa clone Pop1-053A03, complete sequence
          Length = 148552

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                            
Query: 244   tcctcaaatgcatccatggtctctgtgtcaaatcctccggcaaactg 290
             ||||||||||||| ||| || ||||  ||||||||||| ||||||||
Sbjct: 59489 tcctcaaatgcatgcattgtttctgcatcaaatcctccagcaaactg 59443
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>gb|AC149425.1| Populus trichocarpa clone Pop1-041F22, complete sequence
          Length = 106128

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                            
Query: 244   tcctcaaatgcatccatggtctctgtgtcaaatcctccggcaaactg 290
             ||||||||||||| ||| || ||||  ||||||||||| ||||||||
Sbjct: 57458 tcctcaaatgcatgcattgtttctgcatcaaatcctccagcaaactg 57412
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>gb|AC149424.1| Populus trichocarpa clone Pop1-011N15, complete sequence
          Length = 152544

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                            
Query: 244   tcctcaaatgcatccatggtctctgtgtcaaatcctccggcaaactg 290
             ||||||||||||| ||| || ||||  ||||||||||| ||||||||
Sbjct: 41452 tcctcaaatgcatgcattgtttctgcatcaaatcctccagcaaactg 41498
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>gb|AC122746.7| Mus musculus chromosome 17, clone RP23-144A20, complete sequence
          Length = 218858

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 90     acactacatacatacacaccaac 112
              |||||||||||||||||||||||
Sbjct: 191490 acactacatacatacacaccaac 191512
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>emb|AL161549.2|ATCHRIV49 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 49
          Length = 199075

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                
Query: 241   agctcctcaaatgcatccatggtctctgtgtcaaatcctccggcaaactga 291
             ||||| |||||||| | ||| || ||||  |||||||||||||||||||||
Sbjct: 12587 agctcttcaaatgccttcattgtttctgcatcaaatcctccggcaaactga 12537
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>emb|AL021710.1|ATF28J12 Arabidopsis thaliana DNA chromosome 4, BAC clone F28J12 (ESSAII
             project)
          Length = 110102

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                
Query: 241   agctcctcaaatgcatccatggtctctgtgtcaaatcctccggcaaactga 291
             ||||| |||||||| | ||| || ||||  |||||||||||||||||||||
Sbjct: 93765 agctcttcaaatgccttcattgtttctgcatcaaatcctccggcaaactga 93715
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>gb|AC155242.2| Mus musculus BAC clone RP24-496G24 from chromosome 17, complete sequence
          Length = 132408

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 90     acactacatacatacacaccaac 112
              |||||||||||||||||||||||
Sbjct: 131698 acactacatacatacacaccaac 131676
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>gb|AY107994.1| Zea mays PCO117356 mRNA sequence
          Length = 947

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 294 aattctgaaggcaaatctcacag 316
           |||||||||||||||||||||||
Sbjct: 246 aattctgaaggcaaatctcacag 224
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>ref|NM_113468.3| Arabidopsis thaliana CHUP1 (CHLOROPLAST UNUSUAL POSITIONING 1)
            AT3G25690 (CHUP1) mRNA, complete cds
          Length = 3379

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 244  tcctcaaatgcatccatggtctctgtgtcaaatcctccggcaaactgatg 293
            ||||||||||| | |||| ||||||  ||||| ||||| |||||||||||
Sbjct: 3152 tcctcaaatgctttcatgctctctgcatcaaaccctccagcaaactgatg 3103
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>gb|AC068066.3| Mus musculus strain C57BL6/J chromosome 6 clone RP23-414I9, complete
              sequence
          Length = 184879

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 87     aatacactacatacatacacac 108
              ||||||||||||||||||||||
Sbjct: 106438 aatacactacatacatacacac 106417
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>gb|AC121497.15| Mus musculus chromosome 6, clone RP23-2M23, complete sequence
          Length = 231059

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 87     aatacactacatacatacacac 108
              ||||||||||||||||||||||
Sbjct: 227407 aatacactacatacatacacac 227428
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>dbj|AB087408.1| Arabidopsis thaliana CHUP1 mRNA for actin binding protein, complete
            cds
          Length = 3320

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 244  tcctcaaatgcatccatggtctctgtgtcaaatcctccggcaaactgatg 293
            ||||||||||| | |||| ||||||  ||||| ||||| |||||||||||
Sbjct: 3152 tcctcaaatgctttcatgctctctgcatcaaaccctccagcaaactgatg 3103
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>gb|AC102914.9| Mus musculus chromosome 15, clone RP24-274M4, complete sequence
          Length = 185807

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 336   cagagctaggtccttgttcag 356
             |||||||||||||||||||||
Sbjct: 94656 cagagctaggtccttgttcag 94636
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>gb|AC161193.3| Mus musculus chromosome 8, clone RP23-308L22, complete sequence
          Length = 177860

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 88    atacactacatacatacacac 108
             |||||||||||||||||||||
Sbjct: 83304 atacactacatacatacacac 83324
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>gb|AF384675.1| Mus musculus FGF15 (Fgf15) gene, complete cds; BC1 scRNA gene, complete
             sequence; hypothetical protein and cyclin D1 (Ccnd1)
             genes, complete cds
          Length = 154480

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 90    acactacatacatacacacca 110
             |||||||||||||||||||||
Sbjct: 91073 acactacatacatacacacca 91093
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>gb|AC112964.8| Mus musculus chromosome 8, clone RP24-82M4, complete sequence
          Length = 193076

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 88     atacactacatacatacacac 108
              |||||||||||||||||||||
Sbjct: 135267 atacactacatacatacacac 135287
to top
>gb|AC166079.2| Mus musculus BAC clone RP23-51L15 from chromosome 7, complete sequence
          Length = 193749

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 90     acactacatacatacacacca 110
              |||||||||||||||||||||
Sbjct: 127812 acactacatacatacacacca 127792
to top
>gb|AC142211.3| Mus musculus BAC clone RP24-501B23 from chromosome 8, complete sequence
          Length = 175636

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 90    acactacatacatacacacca 110
             |||||||||||||||||||||
Sbjct: 45282 acactacatacatacacacca 45262
to top
>gb|AC140471.2| Mus musculus BAC clone RP24-400H5 from chromosome 19, complete sequence
          Length = 185153

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 88     atacactacatacatacacac 108
              |||||||||||||||||||||
Sbjct: 125725 atacactacatacatacacac 125705
to top
>gb|AC127573.4| Mus musculus BAC clone RP24-231H7 from chromosome 9, complete sequence
          Length = 148263

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 90    acactacatacatacacacca 110
             |||||||||||||||||||||
Sbjct: 91277 acactacatacatacacacca 91297
to top
>gb|AC123804.3| Mus musculus BAC clone RP24-140B5 from chromosome 7, complete sequence
          Length = 145046

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 90     acactacatacatacacacca 110
              |||||||||||||||||||||
Sbjct: 134902 acactacatacatacacacca 134882
to top
>gb|AC125354.4| Mus musculus BAC clone RP23-302B8 from 8, complete sequence
          Length = 159941

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 88     atacactacatacatacacac 108
              |||||||||||||||||||||
Sbjct: 109170 atacactacatacatacacac 109150
to top
>emb|AL022153.1|HS23K20 Human DNA sequence from clone RP1-23K20 on chromosome Xq25-26.2 Contains
              the 5' end of the COVA1 gene for cytosolic ovarian
              carcinoma antigen 1, the 3' end of a novel gene and a CpG
              island, complete sequence
          Length = 126352

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 387    tcttttcatgtacatatttgc 407
              |||||||||||||||||||||
Sbjct: 122159 tcttttcatgtacatatttgc 122179
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>gb|AC165271.2| Mus musculus BAC clone RP24-424G16 from chromosome 16, complete
             sequence
          Length = 165496

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 90    acactacatacatacacacca 110
             |||||||||||||||||||||
Sbjct: 26015 acactacatacatacacacca 26035
to top
>gb|AC161763.3| Mus musculus BAC clone RP23-294B14 from chromosome 7, complete sequence
          Length = 221679

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 90    acactacatacatacacacca 110
             |||||||||||||||||||||
Sbjct: 40030 acactacatacatacacacca 40010
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>gb|AC099818.2| Homo sapiens chromosome 8, clone RP11-99I9, complete sequence
          Length = 160046

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 387  tcttttcatgtacatatttgc 407
            |||||||||||||||||||||
Sbjct: 6674 tcttttcatgtacatatttgc 6654
to top
>gb|AC021733.12| Homo sapiens chromosome 8, clone RP11-775B15, complete sequence
          Length = 158341

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 387    tcttttcatgtacatatttgc 407
              |||||||||||||||||||||
Sbjct: 147151 tcttttcatgtacatatttgc 147131
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                       
Query: 288    ctgatgaattctgaaggcaaatctcacagcctgaagcagca 328
              |||||||| || ||| |||||||||||| ||||||| ||||
Sbjct: 274026 ctgatgaactcggaaagcaaatctcacaccctgaagaagca 274066
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                       
Query: 288    ctgatgaattctgaaggcaaatctcacagcctgaagcagca 328
              |||||||| || ||| |||||||||||| ||||||| ||||
Sbjct: 256287 ctgatgaactcggaaagcaaatctcacaccctgaagaagca 256327
to top
>gb|AC134339.6| Mus musculus BAC clone RP23-5F21 from 8, complete sequence
          Length = 229073

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 87    aatacactacatacatacaca 107
             |||||||||||||||||||||
Sbjct: 25445 aatacactacatacatacaca 25465
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>gb|AC123621.10| Mus musculus chromosome 19, clone RP23-74D13, complete sequence
          Length = 197720

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 88     atacactacatacatacacac 108
              |||||||||||||||||||||
Sbjct: 196350 atacactacatacatacacac 196370
to top
>gb|AC166165.3| Mus musculus BAC clone RP23-381I17 from chromosome 10, complete
             sequence
          Length = 217425

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 90    acactacatacatacacacca 110
             |||||||||||||||||||||
Sbjct: 37516 acactacatacatacacacca 37536
to top
>gb|AC132232.6| Mus musculus BAC clone RP24-489N16 from chromosome 10, complete
            sequence
          Length = 166451

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 90   acactacatacatacacacca 110
            |||||||||||||||||||||
Sbjct: 5780 acactacatacatacacacca 5760
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                       
Query: 288    ctgatgaattctgaaggcaaatctcacagcctgaagcagca 328
              |||||||| || ||| |||||||||||| ||||||| ||||
Sbjct: 256287 ctgatgaactcggaaagcaaatctcacaccctgaagaagca 256327
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                       
Query: 288    ctgatgaattctgaaggcaaatctcacagcctgaagcagca 328
              |||||||| || ||| |||||||||||| ||||||| ||||
Sbjct: 274026 ctgatgaactcggaaagcaaatctcacaccctgaagaagca 274066
to top
>dbj|AP003153.1| Mus musculus genomic DNA, chromosome 16q clone:RP21-485C23, complete
              sequences
          Length = 156444

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 90     acactacatacatacacacca 110
              |||||||||||||||||||||
Sbjct: 120791 acactacatacatacacacca 120771
to top
>dbj|AP003152.1| Mus musculus genomic DNA, chromosome 16q clone:RP21-356B22, complete
             sequences
          Length = 190116

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 90    acactacatacatacacacca 110
             |||||||||||||||||||||
Sbjct: 43311 acactacatacatacacacca 43291
to top
>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa from
             chromosome 11 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 160673

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 288   ctgatgaattctgaaggcaaatctcacagcctgaagcagca 328
             |||||||| || ||| |||||||||||| ||||||| ||||
Sbjct: 48706 ctgatgaactcggaaagcaaatctcacaccctgaagaagca 48666
to top
>emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa0052H10 of library OSJNBa
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 152222

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 288  ctgatgaattctgaaggcaaatctcacagcctgaagcagca 328
            |||||||| || ||| |||||||||||| ||||||| ||||
Sbjct: 7077 ctgatgaactcggaaagcaaatctcacaccctgaagaagca 7117
to top
>emb|BX000491.1|CNS08CDH Oryza sativa chromosome 12, . BAC OSJNBb0068K19 of library OSJNBb
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 96667

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 288  ctgatgaattctgaaggcaaatctcacagcctgaagcagca 328
            |||||||| || ||| |||||||||||| ||||||| ||||
Sbjct: 1230 ctgatgaactcggaaagcaaatctcacaccctgaagaagca 1190
to top
>emb|BX248320.3| Zebrafish DNA sequence from clone CH211-146A1 in linkage group 18,
             complete sequence
          Length = 54960

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 82    actcaaatacactacatacat 102
             |||||||||||||||||||||
Sbjct: 11078 actcaaatacactacatacat 11058
to top
>gb|AC165248.2| Mus musculus BAC clone RP24-219D2 from chromosome 16, complete sequence
          Length = 190373

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 90     acactacatacatacacacca 110
              |||||||||||||||||||||
Sbjct: 166973 acactacatacatacacacca 166993
to top
>gb|AC163288.4| Mus musculus BAC clone RP23-279M5 from chromosome 8, complete sequence
          Length = 222867

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 90     acactacatacatacacacca 110
              |||||||||||||||||||||
Sbjct: 150225 acactacatacatacacacca 150205
to top
>gb|AC114653.11| Mus musculus chromosome 5, clone RP24-158G19, complete sequence
          Length = 164313

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 88    atacactacatacatacaca 107
             ||||||||||||||||||||
Sbjct: 27005 atacactacatacatacaca 26986
to top
>gb|AC068608.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-434O14, complete
              sequence
          Length = 191358

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 89     tacactacatacatacacac 108
              ||||||||||||||||||||
Sbjct: 104124 tacactacatacatacacac 104105
to top
>gb|AC129216.4| Mus musculus BAC clone RP24-446C11 from chromosome 14, complete sequence
          Length = 190338

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 88     atacactacatacatacaca 107
              ||||||||||||||||||||
Sbjct: 119024 atacactacatacatacaca 119005
to top
>gb|AC122356.4| Mus musculus BAC clone RP23-401P15 from chromosome 14, complete
             sequence
          Length = 206660

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 88    atacactacatacatacaca 107
             ||||||||||||||||||||
Sbjct: 27347 atacactacatacatacaca 27328
to top
>ref|XM_814945.1| Trypanosoma cruzi strain CL Brener dynein heavy chain
            (Tc00.1047053506679.110) partial mRNA
          Length = 12480

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 241  agctcctcaaatgcatccatggtc 264
            |||||||| |||||||||||||||
Sbjct: 1364 agctcctcgaatgcatccatggtc 1341
to top
>gb|AC116592.5| Mus musculus BAC clone RP24-90K3 from 2, complete sequence
          Length = 238657

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 242    gctcctcaaatgcatccatg 261
              ||||||||||||||||||||
Sbjct: 154845 gctcctcaaatgcatccatg 154826
to top
>gb|AC005084.2| Homo sapiens BAC clone CTA-298G8 from 7, complete sequence
          Length = 177901

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 388    cttttcatgtacatatttgc 407
              ||||||||||||||||||||
Sbjct: 155627 cttttcatgtacatatttgc 155646
to top
>emb|AL360297.12| Human DNA sequence from clone RP11-386O9 on chromosome 1 Contains two
             novel genes, complete sequence
          Length = 169881

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 388   cttttcatgtacatatttgc 407
             ||||||||||||||||||||
Sbjct: 35199 cttttcatgtacatatttgc 35218
to top
>emb|AL122004.17|HSJ678E16 Human DNA sequence from clone RP4-678E16 on chromosome 1p32.3-34.2
             Contains the 3' end of the gene for a novel protein
             (FLJ31862, FLJ22091, FLJ10597), the gene for a novel
             DUF829 domain-containing protein, two novel genes and four
             CpG islands, complete sequence
          Length = 107037

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 95    acatacatacacaccaacct 114
             ||||||||||||||||||||
Sbjct: 57402 acatacatacacaccaacct 57383
to top
>gb|AF155220.1| Onchocerca volvulus fructose 1,6 bisphosphate aldolase (Fba) mRNA,
           complete cds
          Length = 1172

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 20  gtttcagcaatgttgcttccaaat 43
           |||||||||||||| |||||||||
Sbjct: 704 gtttcagcaatgttccttccaaat 681
to top
>emb|BX664607.21| Zebrafish DNA sequence from clone CH211-132B12 in linkage group 18,
             complete sequence
          Length = 179328

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 88    atacactacatacatacaca 107
             ||||||||||||||||||||
Sbjct: 24073 atacactacatacatacaca 24092
to top
>gb|AC114614.9| Mus musculus chromosome 5, clone RP24-81J14, complete sequence
          Length = 206921

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 88     atacactacatacatacaca 107
              ||||||||||||||||||||
Sbjct: 199951 atacactacatacatacaca 199932
to top
>dbj|AK113560.1| Ciona intestinalis cDNA, clone:ciad073f05, full insert sequence
          Length = 1587

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 384  aactcttttcatgtacatat 403
            ||||||||||||||||||||
Sbjct: 1300 aactcttttcatgtacatat 1319
to top
>gb|U49864.1|CRU49864 Chlamydomonas reinhardtii plus mating structure glycoprotein (fus1)
            gene, complete cds
          Length = 4813

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 111  acctttcaaaccgcctgtca 130
            ||||||||||||||||||||
Sbjct: 4527 acctttcaaaccgcctgtca 4546
to top
>gb|AC127589.4| Mus musculus BAC clone RP23-134K6 from 5, complete sequence
          Length = 209121

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 88     atacactacatacatacaca 107
              ||||||||||||||||||||
Sbjct: 147527 atacactacatacatacaca 147546
to top
>emb|AL845529.10| Mouse DNA sequence from clone RP23-276D17 on chromosome 2, complete
             sequence
          Length = 166971

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 242   gctcctcaaatgcatccatg 261
             ||||||||||||||||||||
Sbjct: 65211 gctcctcaaatgcatccatg 65230
to top
>gb|U96178.1|OVU96178 Onchocerca volvulus fructose-bisphosphate aldolase mRNA, partial
           cds
          Length = 1152

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 20  gtttcagcaatgttgcttccaaat 43
           |||||||||||||| |||||||||
Sbjct: 684 gtttcagcaatgttccttccaaat 661
to top
>gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete genome
          Length = 2056416

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    aaccgcctgtcatgcttacc 138
              ||||||||||||||||||||
Sbjct: 402394 aaccgcctgtcatgcttacc 402375


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,945,402
Number of Sequences: 3902068
Number of extensions: 3945402
Number of successful extensions: 113452
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 113120
Number of HSP's gapped (non-prelim): 332
length of query: 410
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 388
effective length of database: 17,147,199,772
effective search space: 6653113511536
effective search space used: 6653113511536
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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