ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl40a02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1OR1I1_HUMAN (O60431) Olfactory receptor 1I1 (Olfactory receptor ... 30 1.4
2YR5A_AGRT5 (Q8U530) Hypothetical protein Atu2659.1/AGR_C_4820 28 4.1
3Y414_MYCGE (P47653) Hypothetical protein MG414 28 4.1
4FIBP_ADEP3 (Q83457) Fiber protein (pIV) 28 4.1
5MURA1_CLOTE (Q899K4) UDP-N-acetylglucosamine 1-carboxyvinyltrans... 28 5.4
6BZZ1_YEAST (P38822) Protein BZZ1 28 5.4
7GLGB_ERWCH (Q8GQC5) 1,4-alpha-glucan branching enzyme (EC 2.4.1.... 28 5.4
8PTG3C_MYCGE (P47315) PTS system glucose-specific EIICBA componen... 28 5.4
9ATD3A_HUMAN (Q9NVI7) ATPase family AAA domain-containing protein 3A 28 5.4
10ATD3B_HUMAN (Q5T9A4) ATPase family AAA domain-containing protein 3B 28 5.4
11PURA_BARHE (Q6G4G5) Adenylosuccinate synthetase (EC 6.3.4.4) (IM... 28 7.0
12PIGU_RAT (Q8CHJ1) GPI transamidase component PIG-U (Phosphatidyl... 28 7.0
13CBPE_BOVIN (P04836) Carboxypeptidase E (EC 3.4.17.10) (CPE) (Car... 28 7.0
14SYC_SILPO (Q5LRJ6) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cyst... 27 9.2
15PIGU_MOUSE (Q8K358) GPI transamidase component PIG-U (Phosphatid... 27 9.2
16DRD2_PANTR (P60026) D(2) dopamine receptor (Dopamine D2 receptor) 27 9.2
17DRD2_HUMAN (P14416) D(2) dopamine receptor (Dopamine D2 receptor) 27 9.2
18CBPE_MOUSE (Q00493) Carboxypeptidase E precursor (EC 3.4.17.10) ... 27 9.2
19CBPE_HUMAN (P16870) Carboxypeptidase E precursor (EC 3.4.17.10) ... 27 9.2

>OR1I1_HUMAN (O60431) Olfactory receptor 1I1 (Olfactory receptor 19-20)|
           (OR19-20)
          Length = 355

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -1

Query: 358 WVVRALQMILHTCYDAVLVLSFGSVWSGGIC*MSPL 251
           W++  LQ ++HTC  A L    GS  S   C + PL
Sbjct: 149 WMITNLQSLIHTCLMAQLTFCAGSEISHFFCDLMPL 184



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>YR5A_AGRT5 (Q8U530) Hypothetical protein Atu2659.1/AGR_C_4820|
          Length = 106

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 16/64 (25%), Positives = 29/64 (45%)
 Frame = -2

Query: 201 SVYDWAVIGGLPIRWFHFFSFCRCRIQ*IHFCPYDLLNIAEACLCMV*QRLVK*TLPASG 22
           ++Y W +I      W + F+    R Q ++     L+N+ E  L     R ++  LP  G
Sbjct: 23  NLYTWVLIASAIFSWLYAFNVINSRNQFVNAIGSFLVNVTEPAL-----RPIRRILPNLG 77

Query: 21  NLDL 10
            +D+
Sbjct: 78  GIDI 81



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>Y414_MYCGE (P47653) Hypothetical protein MG414|
          Length = 1036

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = +3

Query: 30  QAKFISPASVKPYRDMLQRCSTNRRDKNGFTESCNDRRKKNE 155
           +++ IS  SV+P  D +++ ST +R K+GF      R+  NE
Sbjct: 616 ESENISNYSVEPLFDSIKKLSTIKRTKDGFEYKFKYRKDFNE 657



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>FIBP_ADEP3 (Q83457) Fiber protein (pIV)|
          Length = 448

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = +2

Query: 182 TAQSYTLYTGPS*L*ENLGTRPTQRAHLTNSTRPNG 289
           T + YTL+TG S         PT    LTN+T PNG
Sbjct: 256 TFKPYTLWTGAS---------PTANVILTNTTTPNG 282



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>MURA1_CLOTE (Q899K4) UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 (EC|
           2.5.1.7) (Enoylpyruvate transferase 1)
           (UDP-N-acetylglucosamine enolpyruvyl transferase 1) (EPT
           1)
          Length = 421

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +1

Query: 73  TCFSDVQQIVGTKMDSLNPATTEGKKMKPSYW 168
           +C SD   I  TK++S N  T + +KM+ SY+
Sbjct: 69  SCSSDAIIIDSTKLNSYNANTEDVRKMRASYY 100



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>BZZ1_YEAST (P38822) Protein BZZ1|
          Length = 633

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3

Query: 60  KPYRDMLQRCSTNRRDKNGFTESCNDRRKK 149
           K  +D  + CST    +N +T++ NDR KK
Sbjct: 152 KAKKDYDEACSTMEMARNRYTKASNDRNKK 181



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>GLGB_ERWCH (Q8GQC5) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen|
           branching enzyme) (BE)
           (1,4-alpha-D-glucan:1,4-alpha-D-glucan
           6-glucosyl-transferase)
          Length = 731

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = -3

Query: 275 WNLLNEPFGWGASPSSLIARKVRCRVYMIGRLLVDYQYDGF 153
           W+LL+EP GW A    L+     C          DY + GF
Sbjct: 590 WHLLDEPEGWHAGVQQLVRDLNHCYRQHPPLYQCDYLHQGF 630



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>PTG3C_MYCGE (P47315) PTS system glucose-specific EIICBA component (EIICBA-Glc)|
           (EII-Glc/EIII-Glc) [Includes: Glucose permease IIC
           component (PTS system glucose-specific EIIC component);
           Glucose-specific phosphotransferase enzyme IIB component
           (EC 2.7.1.6
          Length = 908

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 9/73 (12%)
 Frame = -3

Query: 278 GWNLLNEPFGWGASPSSLIARKVRCR---VYMIGRLLVD----YQYDGF--IFFPSVVAG 126
           G+N+L     W A P S IA  +        + G ++V     Y Y+ F  I  P V+  
Sbjct: 128 GYNILY----WKAVPQSAIASTLGLNSLSTSVFGGIIVGALTAYLYNKFYAIRLPDVIGF 183

Query: 125 FSESIFVPTIC*T 87
           FS + FVP IC T
Sbjct: 184 FSGTRFVPIICMT 196



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>ATD3A_HUMAN (Q9NVI7) ATPase family AAA domain-containing protein 3A|
          Length = 634

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +1

Query: 226 RELGDAPHPKGSFNKFHPT--KRSRSSGPKQHHNKCVVSSVGLA 351
           R LGD P PK  ++ F PT  +R+  +  +  H++    ++ LA
Sbjct: 35  RGLGDRPAPKDKWSNFDPTGLERAAKAARELEHSRYAKDALNLA 78



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>ATD3B_HUMAN (Q5T9A4) ATPase family AAA domain-containing protein 3B|
          Length = 648

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +1

Query: 226 RELGDAPHPKGSFNKFHPT--KRSRSSGPKQHHNKCVVSSVGLA 351
           R LGD P PK  ++ F PT  +R+  +  +  H++    ++ LA
Sbjct: 35  RGLGDRPAPKDKWSNFDPTGLERAAKAARELEHSRYAKEALNLA 78



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>PURA_BARHE (Q6G4G5) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate|
           ligase) (AdSS) (AMPSase)
          Length = 429

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +1

Query: 139 EGKKMKPSYW*STNNRPIIYTLHRTFLAIRELG 237
           +G K+ P       N P+I +LHR   AIRE G
Sbjct: 88  QGVKIVPEILRIAENAPLILSLHRDLDAIRESG 120



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>PIGU_RAT (Q8CHJ1) GPI transamidase component PIG-U|
           (Phosphatidylinositol-glycan biosynthesis, class U
           protein) (Cell division cycle protein 91-like 1)
           (CDC91-like 1 protein) (Liver regeneration-related
           protein LRRGT00059)
          Length = 434

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = -1

Query: 172 ITNTMVSFFFLLSLQDSVNPFLSLRFVEHR*SMSLYGLT 56
           I NT+++FF L +++ SV  FLS  F+      SLY +T
Sbjct: 161 INNTLIAFFILTTIKGSV--FLSAIFLALATYQSLYPIT 197



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>CBPE_BOVIN (P04836) Carboxypeptidase E (EC 3.4.17.10) (CPE) (Carboxypeptidase|
           H) (CPH) (Enkephalin convertase) (Prohormone-processing
           carboxypeptidase)
          Length = 434

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +3

Query: 129 CNDRRKKNETIVLVIHQ*PPNHIHSTPDL 215
           CN+ +K NETIV +IH      IH  P L
Sbjct: 90  CNEYQKGNETIVQLIHN---TRIHIMPSL 115



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>SYC_SILPO (Q5LRJ6) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA|
           ligase) (CysRS)
          Length = 465

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +3

Query: 201 STPDLPSYKRTWGRAPP 251
           STPDLP +   WGR  P
Sbjct: 191 STPDLPGWDSPWGRGRP 207



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>PIGU_MOUSE (Q8K358) GPI transamidase component PIG-U|
           (Phosphatidylinositol-glycan biosynthesis, class U
           protein) (Cell division cycle protein 91-like 1)
           (CDC91-like 1 protein)
          Length = 433

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = -1

Query: 172 ITNTMVSFFFLLSLQDSVNPFLSLRFVEHR*SMSLYGLT 56
           I NT+++FF L +++ SV  FLS  F+      SLY +T
Sbjct: 160 INNTLIAFFILTTIKGSV--FLSAVFLALATYQSLYPVT 196



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>DRD2_PANTR (P60026) D(2) dopamine receptor (Dopamine D2 receptor)|
          Length = 443

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +3

Query: 186 PNH--IHSTPDLPSYKRTWGRAPPKGLI*QIPPDQTEPKLRTKTA 314
           P+H  +HSTPD P+     G A     I +I   QT P  +T+T+
Sbjct: 310 PSHHGLHSTPDSPAKPEKNGHAKDHPKIAKIFEIQTMPNGKTRTS 354



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>DRD2_HUMAN (P14416) D(2) dopamine receptor (Dopamine D2 receptor)|
          Length = 443

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +3

Query: 186 PNH--IHSTPDLPSYKRTWGRAPPKGLI*QIPPDQTEPKLRTKTA 314
           P+H  +HSTPD P+     G A     I +I   QT P  +T+T+
Sbjct: 310 PSHHGLHSTPDSPAKPEKNGHAKDHPKIAKIFEIQTMPNGKTRTS 354



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>CBPE_MOUSE (Q00493) Carboxypeptidase E precursor (EC 3.4.17.10) (CPE)|
           (Carboxypeptidase H) (CPH) (Enkephalin convertase)
           (Prohormone-processing carboxypeptidase)
          Length = 476

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +3

Query: 129 CNDRRKKNETIVLVIHQ*PPNHIHSTPDL 215
           CN+ +K NETIV +IH      IH  P L
Sbjct: 132 CNEYQKGNETIVNLIHS---TRIHIMPSL 157



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>CBPE_HUMAN (P16870) Carboxypeptidase E precursor (EC 3.4.17.10) (CPE)|
           (Carboxypeptidase H) (CPH) (Enkephalin convertase)
           (Prohormone-processing carboxypeptidase)
          Length = 476

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +3

Query: 129 CNDRRKKNETIVLVIHQ*PPNHIHSTPDL 215
           CN+ +K NETIV +IH      IH  P L
Sbjct: 132 CNEYQKGNETIVNLIHS---TRIHIMPSL 157


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,939,683
Number of Sequences: 219361
Number of extensions: 1416145
Number of successful extensions: 2832
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2832
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 1402043640
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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