Clone Name | rbastl39h10 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | ref|XM_711520.1| Candida albicans SC5314 hypothetical protein (C... | 36 | 4.6 | 2 | gb|AC010692.4| Drosophila melanogaster 3L BAC RP98-11B23 (Roswel... | 36 | 4.6 | 3 | gb|CP000264.1| Jannaschia sp. CCS1, complete genome | 36 | 4.6 | 4 | gb|AE003533.4| Drosophila melanogaster chromosome 3L, section 52... | 36 | 4.6 |
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>ref|XM_711520.1| Candida albicans SC5314 hypothetical protein (CaO19_7372), mRNA Length = 3327 Score = 36.2 bits (18), Expect = 4.6 Identities = 18/18 (100%) Strand = Plus / Plus Query: 24 caacgaatgctcaagaaa 41 |||||||||||||||||| Sbjct: 2747 caacgaatgctcaagaaa 2764
>gb|AC010692.4| Drosophila melanogaster 3L BAC RP98-11B23 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179164 Score = 36.2 bits (18), Expect = 4.6 Identities = 18/18 (100%) Strand = Plus / Minus Query: 5 tacacaatgacacgcact 22 |||||||||||||||||| Sbjct: 135065 tacacaatgacacgcact 135048
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 36.2 bits (18), Expect = 4.6 Identities = 21/22 (95%) Strand = Plus / Minus Query: 16 acgcactacaacgaatgctcaa 37 |||||||||||| ||||||||| Sbjct: 1399780 acgcactacaacaaatgctcaa 1399759
>gb|AE003533.4| Drosophila melanogaster chromosome 3L, section 52 of 83 of the complete sequence Length = 289141 Score = 36.2 bits (18), Expect = 4.6 Identities = 18/18 (100%) Strand = Plus / Plus Query: 5 tacacaatgacacgcact 22 |||||||||||||||||| Sbjct: 12425 tacacaatgacacgcact 12442 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 176,421 Number of Sequences: 3902068 Number of extensions: 176421 Number of successful extensions: 40096 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 40082 Number of HSP's gapped (non-prelim): 14 length of query: 41 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 21 effective length of database: 17,155,003,908 effective search space: 360255082068 effective search space used: 360255082068 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)