ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl39h10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_711520.1| Candida albicans SC5314 hypothetical protein (C... 36 4.6
2gb|AC010692.4| Drosophila melanogaster 3L BAC RP98-11B23 (Roswel... 36 4.6
3gb|CP000264.1| Jannaschia sp. CCS1, complete genome 36 4.6
4gb|AE003533.4| Drosophila melanogaster chromosome 3L, section 52... 36 4.6

>ref|XM_711520.1| Candida albicans SC5314 hypothetical protein (CaO19_7372), mRNA
          Length = 3327

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 24   caacgaatgctcaagaaa 41
            ||||||||||||||||||
Sbjct: 2747 caacgaatgctcaagaaa 2764



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>gb|AC010692.4| Drosophila melanogaster 3L BAC RP98-11B23 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 179164

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 5      tacacaatgacacgcact 22
              ||||||||||||||||||
Sbjct: 135065 tacacaatgacacgcact 135048



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>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                     
Query: 16      acgcactacaacgaatgctcaa 37
               |||||||||||| |||||||||
Sbjct: 1399780 acgcactacaacaaatgctcaa 1399759



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>gb|AE003533.4| Drosophila melanogaster chromosome 3L, section 52 of 83 of the complete
             sequence
          Length = 289141

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 5     tacacaatgacacgcact 22
             ||||||||||||||||||
Sbjct: 12425 tacacaatgacacgcact 12442


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 176,421
Number of Sequences: 3902068
Number of extensions: 176421
Number of successful extensions: 40096
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 40082
Number of HSP's gapped (non-prelim): 14
length of query: 41
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 21
effective length of database: 17,155,003,908
effective search space: 360255082068
effective search space used: 360255082068
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)
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