>LRRN3_RAT (Q9ESY6) Leucine-rich repeats neuronal protein 3 precursor|
           (Neuronal leucine-rich repeat protein 3) (NLRR-3)
          Length = 707

 Score = 31.6 bits (70), Expect = 0.60
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +2

Query: 20  FNITHYIRTTSDYVCLDVPSIYTFSDDYRRNQKRKAVDH 136
           +N+TH   +T   +C+D+P+IY  S     N   K+++H
Sbjct: 578 YNLTHLKPSTEYKICIDIPTIYQKSRKQCVNVTTKSLEH 616

>LRRN3_MOUSE (Q8CBC6) Leucine-rich repeats neuronal protein 3 precursor|
           (Neuronal leucine-rich repeat protein 3) (NLRR-3)
          Length = 707

 Score = 31.2 bits (69), Expect = 0.79
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = +2

Query: 20  FNITHYIRTTSDYVCLDVPSIYTFSDDYRRNQKRKAVDH 136
           +N+TH   +T   +C+D+P++Y  S     N   K+++H
Sbjct: 578 YNLTHLKPSTEYKICIDIPTVYQKSRKQCVNVTTKSLEH 616

>YDIB_ECO57 (Q8X5Y4) Quinate/shikimate dehydrogenase (EC 1.1.1.282)|
           (NAD-dependent shikimate 5-dehydrogenase 2)
          Length = 288

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -1

Query: 175 GNKLDRRISRRKLMVNCLSFLVPAVVVAECIY 80
           G K+  +    K +VN +S L P ++V EC+Y
Sbjct: 203 GTKVGMKPLENKSLVNDISLLHPGLLVTECVY 234

>LRRN3_PONPY (Q5R482) Leucine-rich repeats neuronal protein 3 precursor|
           (Neuronal leucine-rich repeat protein 3) (NLRR-3)
          Length = 708

 Score = 28.1 bits (61), Expect = 6.7
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +2

Query: 20  FNITHYIRTTSDYVCLDVPSIY 85
           +N+TH   +T   +C+D+P+IY
Sbjct: 578 YNLTHLNPSTEYKICIDIPTIY 599

>LRRN3_HUMAN (Q9H3W5) Leucine-rich repeats neuronal protein 3 precursor|
           (Neuronal leucine-rich repeat protein 3) (NLRR-3)
          Length = 708

 Score = 28.1 bits (61), Expect = 6.7
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +2

Query: 20  FNITHYIRTTSDYVCLDVPSIY 85
           +N+TH   +T   +C+D+P+IY
Sbjct: 578 YNLTHLNPSTEYKICIDIPTIY 599

>T2B1_BACST (P70985) Type II restriction enzyme BsoBI (EC 3.1.21.4)|
           (Endonuclease BsoBI) (R.BsoBI)
          Length = 323

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +1

Query: 34  LHQNNIRLCLLRCTINIYIQRRLPQEPKK 120
           L + N+ +CL  C   IY  +++ Q+P+K
Sbjct: 206 LVKKNVDICLFNCEPEIYTPQKVHQQPEK 234


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,205,407
Number of Sequences: 219361
Number of extensions: 378517
Number of successful extensions: 1053
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1053
length of database: 80,573,946
effective HSP length: 39
effective length of database: 72,018,867
effective search space used: 1728452808
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)