>PRR73_ORYSA (Q689G4) Two-component response regulator-like PRR73|
           (Pseudo-response regulator 73) (OsPRR73)
          Length = 767

 Score = 79.0 bits (193), Expect = 3e-15
 Identities = 37/41 (90%), Positives = 39/41 (95%)
 Frame = -2

Query: 290 NFGKKVRYQSRKRLAEQRPRVRGQFVRQSGQEDEAGQAADR 168
           NFGKKVRYQSRKRLAEQRPR+RGQFVRQSGQED+AGQ  DR
Sbjct: 727 NFGKKVRYQSRKRLAEQRPRIRGQFVRQSGQEDQAGQDEDR 767

>PRR37_ORYSA (Q689G8) Two-component response regulator-like PRR37|
           (Pseudo-response regulator 37) (OsPRR37)
          Length = 742

 Score = 62.4 bits (150), Expect = 3e-10
 Identities = 29/34 (85%), Positives = 32/34 (94%)
 Frame = -2

Query: 290 NFGKKVRYQSRKRLAEQRPRVRGQFVRQSGQEDE 189
           NFGKKVRYQSRKRLAEQRPRVRGQFVRQ+ Q+ +
Sbjct: 697 NFGKKVRYQSRKRLAEQRPRVRGQFVRQAVQDQQ 730

>APRR7_ARATH (Q93WK5) Two-component response regulator-like APRR7|
           (Pseudo-response regulator 7)
          Length = 727

 Score = 52.0 bits (123), Expect = 4e-07
 Identities = 24/28 (85%), Positives = 27/28 (96%)
 Frame = -2

Query: 287 FGKKVRYQSRKRLAEQRPRVRGQFVRQS 204
           F KKVRYQSRK+LAEQRPRVRGQFVR++
Sbjct: 685 FRKKVRYQSRKKLAEQRPRVRGQFVRKT 712

>APRR9_ARATH (Q8L500) Two-component response regulator-like APRR9|
           (Pseudo-response regulator 9)
          Length = 468

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 23/26 (88%), Positives = 25/26 (96%)
 Frame = -2

Query: 287 FGKKVRYQSRKRLAEQRPRVRGQFVR 210
           F KKVRYQSRK+LAEQRPRV+GQFVR
Sbjct: 433 FDKKVRYQSRKKLAEQRPRVKGQFVR 458

>PRR95_ORYSA (Q689G6) Two-component response regulator-like PRR95|
           (Pseudo-response regulator 95) (OsPRR95)
          Length = 623

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 24/27 (88%), Positives = 25/27 (92%)
 Frame = -2

Query: 287 FGKKVRYQSRKRLAEQRPRVRGQFVRQ 207
           F KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 590 FEKKVRYQSRKLLAEQRPRVKGQFVRQ 616

>PRR1_ORYSA (Q689G9) Two-component response regulator-like PRR1|
           (Pseudo-response regulator 1) (OsPRR1)
          Length = 518

 Score = 49.3 bits (116), Expect = 3e-06
 Identities = 23/32 (71%), Positives = 26/32 (81%)
 Frame = -2

Query: 287 FGKKVRYQSRKRLAEQRPRVRGQFVRQSGQED 192
           F KKVRY +RK+LAE RPRVRGQFVRQ+   D
Sbjct: 459 FDKKVRYVNRKKLAETRPRVRGQFVRQANYTD 490

>APRR5_ARATH (Q6LA42) Two-component response regulator-like APRR5|
           (Pseudo-response regulator 5)
          Length = 558

 Score = 49.3 bits (116), Expect = 3e-06
 Identities = 21/27 (77%), Positives = 26/27 (96%)
 Frame = -2

Query: 287 FGKKVRYQSRKRLAEQRPRVRGQFVRQ 207
           + KKVRY+SRK+LAEQRPR++GQFVRQ
Sbjct: 525 YEKKVRYESRKKLAEQRPRIKGQFVRQ 551

>APRR3_ARATH (Q9LVG4) Two-component response regulator-like APRR3|
           (Pseudo-response regulator 3)
          Length = 495

 Score = 48.1 bits (113), Expect = 6e-06
 Identities = 24/37 (64%), Positives = 28/37 (75%), Gaps = 5/37 (13%)
 Frame = -2

Query: 287 FGKKVRYQSRKRLAEQRPRVRGQFVR-----QSGQED 192
           F KKVRY SRK+LAEQRP V+GQF+R     +SG ED
Sbjct: 458 FEKKVRYHSRKKLAEQRPHVKGQFIRKRDDHKSGSED 494

>APRR1_ARATH (Q9LKL2) Two-component response regulator-like APRR1|
           (Pseudo-response regulator 1) (Timing of CAB expression
           1) (ABI3-interacting protein 1)
          Length = 618

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 24/42 (57%), Positives = 30/42 (71%), Gaps = 8/42 (19%)
 Frame = -2

Query: 287 FGKKVRYQSRKRLAEQRPRVRGQFVRQ--------SGQEDEA 186
           F KK+RY +RKRLAE+RPRV+GQFVR+        +GQ D A
Sbjct: 549 FDKKIRYVNRKRLAERRPRVKGQFVRKMNGVNVDLNGQPDSA 590

>COL1_ARATH (O50055) Zinc finger protein CONSTANS-LIKE 1|
          Length = 355

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 18/37 (48%), Positives = 27/37 (72%)
 Frame = -2

Query: 287 FGKKVRYQSRKRLAEQRPRVRGQFVRQSGQEDEAGQA 177
           F K +RY SRK  AE+RPR++G+F ++   ++EA QA
Sbjct: 302 FEKTIRYASRKAYAEKRPRIKGRFAKKKDVDEEANQA 338

>COL7_ARATH (Q9C9A9) Putative zinc finger protein CONSTANS-LIKE 7|
          Length = 392

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 16/28 (57%), Positives = 24/28 (85%)
 Frame = -2

Query: 287 FGKKVRYQSRKRLAEQRPRVRGQFVRQS 204
           F KK+RY+ RK  AEQRPR++G+FV+++
Sbjct: 361 FSKKIRYEVRKLNAEQRPRIKGRFVKRT 388

>COL6_ARATH (Q8LG76) Zinc finger protein CONSTANS-LIKE 6|
          Length = 406

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 16/28 (57%), Positives = 24/28 (85%)
 Frame = -2

Query: 287 FGKKVRYQSRKRLAEQRPRVRGQFVRQS 204
           F KK+RY+ RK  AE+RPR++G+FV++S
Sbjct: 373 FSKKIRYEVRKLNAEKRPRMKGRFVKRS 400

>COL8_ARATH (Q9M9B3) Putative zinc finger protein CONSTANS-LIKE 8|
          Length = 313

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 16/28 (57%), Positives = 24/28 (85%)
 Frame = -2

Query: 287 FGKKVRYQSRKRLAEQRPRVRGQFVRQS 204
           F KK+RY+ RK  A++RPR++G+FVR+S
Sbjct: 281 FEKKIRYEVRKVNADKRPRMKGRFVRRS 308

>COL5_ARATH (Q9FHH8) Zinc finger protein CONSTANS-LIKE 5|
          Length = 355

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 15/33 (45%), Positives = 24/33 (72%)
 Frame = -2

Query: 287 FGKKVRYQSRKRLAEQRPRVRGQFVRQSGQEDE 189
           F K +RY SRK  AE RPR++G+F +++  E++
Sbjct: 301 FEKTIRYASRKAYAESRPRIKGRFAKRTETEND 333

>COL16_ARATH (Q8RWD0) Zinc finger protein CONSTANS-LIKE 16|
          Length = 417

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 15/28 (53%), Positives = 24/28 (85%)
 Frame = -2

Query: 287 FGKKVRYQSRKRLAEQRPRVRGQFVRQS 204
           F KK+RY+ RK  AE+RPR++G+FV+++
Sbjct: 377 FSKKIRYEVRKLNAEKRPRMKGRFVKRA 404

>COL3_ARATH (Q9SK53) Zinc finger protein CONSTANS-LIKE 3|
          Length = 294

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 15/35 (42%), Positives = 23/35 (65%)
 Frame = -2

Query: 287 FGKKVRYQSRKRLAEQRPRVRGQFVRQSGQEDEAG 183
           F K +RY SRK  AE RPR++G+F +++   +  G
Sbjct: 245 FEKTIRYASRKAYAEMRPRIKGRFAKRTDSRENDG 279

>CONS_ARATH (Q39057) Zinc finger protein CONSTANS|
          Length = 373

 Score = 37.7 bits (86), Expect = 0.008
 Identities = 17/35 (48%), Positives = 23/35 (65%)
 Frame = -2

Query: 287 FGKKVRYQSRKRLAEQRPRVRGQFVRQSGQEDEAG 183
           F K +RY SRK  AE RPRV G+F ++  + +E G
Sbjct: 322 FEKTIRYASRKAYAEIRPRVNGRFAKREIEAEEQG 356

>COL2_ARATH (Q96502) Zinc finger protein CONSTANS-LIKE 2|
          Length = 347

 Score = 37.7 bits (86), Expect = 0.008
 Identities = 17/34 (50%), Positives = 23/34 (67%)
 Frame = -2

Query: 287 FGKKVRYQSRKRLAEQRPRVRGQFVRQSGQEDEA 186
           F K +RY SRK  AE RPR++G+F ++   E EA
Sbjct: 294 FDKTIRYASRKAYAEIRPRIKGRFAKRIETEAEA 327

>COL12_ARATH (Q9LJ44) Putative zinc finger protein CONSTANS-LIKE 12|
          Length = 337

 Score = 37.4 bits (85), Expect = 0.010
 Identities = 16/33 (48%), Positives = 23/33 (69%)
 Frame = -2

Query: 290 NFGKKVRYQSRKRLAEQRPRVRGQFVRQSGQED 192
           +FGK++RY SRK  A+ R RV+G+FV+     D
Sbjct: 295 SFGKQIRYASRKARADTRKRVKGRFVKAGDSYD 327

>COL11_ARATH (O23379) Putative zinc finger protein CONSTANS-LIKE 11|
          Length = 330

 Score = 36.6 bits (83), Expect = 0.017
 Identities = 18/33 (54%), Positives = 25/33 (75%)
 Frame = -2

Query: 287 FGKKVRYQSRKRLAEQRPRVRGQFVRQSGQEDE 189
           FGK++RY SRK  A+ R RV+G+FV+ SG+  E
Sbjct: 292 FGKQIRYASRKARADTRKRVKGRFVK-SGETFE 323

>GAT25_ARATH (Q8H1G0) GATA transcription factor 25 (ZIM-like 2 protein)|
          Length = 302

 Score = 36.2 bits (82), Expect = 0.022
 Identities = 17/38 (44%), Positives = 21/38 (55%)
 Frame = -2

Query: 290 NFGKKVRYQSRKRLAEQRPRVRGQFVRQSGQEDEAGQA 177
           NF KK+RY  RK +A +  R +GQF       DEA  A
Sbjct: 162 NFDKKIRYTVRKEVALRMQRNKGQFTSAKSNNDEAASA 199

>COL4_ARATH (Q940T9) Zinc finger protein CONSTANS-LIKE 4|
          Length = 362

 Score = 36.2 bits (82), Expect = 0.022
 Identities = 14/28 (50%), Positives = 21/28 (75%)
 Frame = -2

Query: 287 FGKKVRYQSRKRLAEQRPRVRGQFVRQS 204
           F K +RY SRK  AE RPR++G+F +++
Sbjct: 311 FEKTIRYASRKAYAEMRPRIKGRFAKRT 338

>COL15_ARATH (Q9C7E8) Zinc finger protein CONSTANS-LIKE 15|
          Length = 433

 Score = 34.3 bits (77), Expect = 0.083
 Identities = 15/28 (53%), Positives = 21/28 (75%)
 Frame = -2

Query: 287 FGKKVRYQSRKRLAEQRPRVRGQFVRQS 204
           + K +RY+SRK  A+ R RVRG+FV+ S
Sbjct: 401 YDKTIRYESRKARADTRLRVRGRFVKAS 428

>COL9_ARATH (Q9SSE5) Zinc finger protein CONSTANS-LIKE 9|
          Length = 372

 Score = 34.3 bits (77), Expect = 0.083
 Identities = 19/39 (48%), Positives = 25/39 (64%)
 Frame = -2

Query: 287 FGKKVRYQSRKRLAEQRPRVRGQFVRQSGQEDEAGQAAD 171
           F K+VRY SRK  A+ R RV+G+FV+       AG+A D
Sbjct: 331 FDKRVRYASRKARADVRRRVKGRFVK-------AGEAYD 362

>COL10_ARATH (Q9LUA9) Zinc finger protein CONSTANS-LIKE 10|
          Length = 373

 Score = 33.9 bits (76), Expect = 0.11
 Identities = 16/32 (50%), Positives = 21/32 (65%)
 Frame = -2

Query: 287 FGKKVRYQSRKRLAEQRPRVRGQFVRQSGQED 192
           F K+VRY SRK  A+ R RV+G+FV+     D
Sbjct: 332 FDKRVRYVSRKERADVRRRVKGRFVKSGEAYD 363

>GAT27_ARATH (Q8GXL7) GATA transcription factor 27 (ZIM-like 1 protein)|
          Length = 297

 Score = 32.7 bits (73), Expect = 0.24
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -2

Query: 290 NFGKKVRYQSRKRLAEQRPRVRGQFVRQSGQEDEAG 183
           NF K +RY  RK +A +  R +GQF       D++G
Sbjct: 158 NFDKTIRYTVRKEVALRMQRKKGQFTSAKSSNDDSG 193

>COL13_ARATH (O82256) Zinc finger protein CONSTANS-LIKE 13|
          Length = 332

 Score = 32.3 bits (72), Expect = 0.32
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = -2

Query: 287 FGKKVRYQSRKRLAEQRPRVRGQFVR 210
           + K +RY+SRK  AE R R+RG+F +
Sbjct: 303 YEKHIRYESRKVRAESRTRIRGRFAK 328

>COL14_ARATH (O22800) Zinc finger protein CONSTANS-LIKE 14|
          Length = 402

 Score = 32.0 bits (71), Expect = 0.41
 Identities = 13/26 (50%), Positives = 20/26 (76%)
 Frame = -2

Query: 287 FGKKVRYQSRKRLAEQRPRVRGQFVR 210
           + K +RY++RK  AE R RV+G+FV+
Sbjct: 373 YDKTIRYETRKARAETRLRVKGRFVK 398

>SREC_HUMAN (Q14162) Endothelial cells scavenger receptor precursor (Acetyl LDL|
           receptor) (Scavenger receptor class F member 1)
          Length = 830

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = +1

Query: 142 CSNSQSRCHLSAAWPASSSCPDCRTNCPRTRGRCSAS 252
           C     RC     W      P+C+  C   RGRCSA+
Sbjct: 201 CEQDSGRCACRPGWWG----PECQQQCECVRGRCSAA 233

>YHBU_ECOLI (P45527) Putative protease yhbU precursor (EC 3.4.-.-)|
          Length = 331

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = +1

Query: 139 VCSNSQSRCHLSAAWPASSSCPDCRTNCPRTRGRCSASLFLLWYRT 276
           +C  S+ RC+LS+     S         P T G CS + F+ W +T
Sbjct: 168 LCIMSEGRCYLSSYLTGES---------PNTIGACSPARFVRWQQT 204

>P3C2G_MOUSE (O70167) Phosphatidylinositol-4-phosphate 3-kinase C2|
            domain-containing gamma polypeptide (EC 2.7.1.154)
            (Phosphoinositide 3-Kinase-C2-gamma) (PtdIns-3-kinase C2
            gamma) (PI3K-C2gamma)
          Length = 1506

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
 Frame = -3

Query: 241  SGHVSVGNLSDSLDKKMRQAKQQTDDICFENYYTHRLLTLTLECS---------INKTPP 89
            S H  + +LS  +++ +R + +  +  C  +++    +  TLE S         ++K+P 
Sbjct: 1333 SDHKRIRDLSHYVEQVLRGSYEVANSDCVLSFFLSEHIQPTLEDSPFVDPGENSLDKSPK 1392

Query: 88   I*LLPCLADSR*TFVISNL 32
            + LL    DSR T ++ +L
Sbjct: 1393 VQLLMTYEDSRLTILVKHL 1411

>ZN335_HUMAN (Q9H4Z2) Zinc finger protein 335|
          Length = 1342

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = +1

Query: 172 SAAWPASSSCPDCRTNCPRTRGRCSASLFLLWYRTFFPK 288
           S A  A+ SCPD     PR RGR S       YR ++ K
Sbjct: 418 SDAENAAPSCPDEHDTLPRRRGRPSRRFLGKKYRKYYYK 456

>YM43_YEAST (Q03218) Hypothetical 56.2 kDa protein in SIP18-SPT21 intergenic|
           region
          Length = 510

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 9/24 (37%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
 Frame = +2

Query: 167 ICLLLG--LPHLLVQTVGQIAHGH 232
           +C L+G  +PH ++ T+G + H H
Sbjct: 253 LCALVGPVIPHTIIDTIGNLGHAH 276

>YAKC_SCHPO (Q09923) Aldo-keto reductase yakc [NADP+] (EC 1.1.1.-)|
          Length = 340

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = -3

Query: 247 PSSGHVSVGNLSDSLDKKMRQAKQQTDDICFENYYTHR 134
           P +G +S+ N  D ++K +  + ++    C + YY HR
Sbjct: 90  PETGELSLNNEPDYIEKALDLSLKRLGIDCIDLYYVHR 127

>Y2170_ARCFU (O28112) Hypothetical protein AF2170|
          Length = 324

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +1

Query: 124 ESITYVCSNSQSRCHLSAAWPASSSCPDCRTNCP-RTRGRCSASLFLLWY 270
           +S  Y+  N+  RC + A +P++ S      +CP    G C  S  ++WY
Sbjct: 141 DSRVYIFLNNSERCEVYAFYPSNESFAKLDVSCPIEHPGGCVHS--VVWY 188


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,320,474
Number of Sequences: 219361
Number of extensions: 833185
Number of successful extensions: 2823
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 2780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2822
length of database: 80,573,946
effective HSP length: 72
effective length of database: 64,779,954
effective search space used: 1554718896
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)