ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl39h01 |
|---|---|
| Clone Library Name | barley_pub |
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 92.4 bits (228), Expect = 4e-19 Identities = 43/53 (81%), Positives = 46/53 (86%) Frame = -2 Query: 419 IEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 261 IE +VV MN DP+LKNR GPAKFPYMLLYPNTSDH G A GLTA+GIPNSISI Sbjct: 810 IESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 862
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 83.2 bits (204), Expect = 2e-16 Identities = 40/53 (75%), Positives = 44/53 (83%) Frame = -2 Query: 419 IEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 261 IE +VV MN D LKNR GPA+FPYMLLYPNTSD TG A G+TA+GIPNSISI Sbjct: 814 IEGKVVGMNGDAGLKNRNGPAEFPYMLLYPNTSDVTGAAAGITAKGIPNSISI 866
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 82.8 bits (203), Expect = 3e-16 Identities = 38/53 (71%), Positives = 44/53 (83%) Frame = -2 Query: 419 IEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 261 IE +V+ MN DP LKNR GPA FPY L++PNTSD+ G AEG+TARGIPNSISI Sbjct: 811 IESKVLNMNKDPLLKNRVGPANFPYTLMFPNTSDNKGAAEGITARGIPNSISI 863
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 81.3 bits (199), Expect = 9e-16 Identities = 39/53 (73%), Positives = 41/53 (77%) Frame = -2 Query: 419 IEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 261 IE +VVAMN DP KNR GP FPY LLYPNTSD G A GL+ARGIPNSISI Sbjct: 818 IESRVVAMNKDPHRKNRVGPTNFPYTLLYPNTSDLKGDAAGLSARGIPNSISI 870
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 69.3 bits (168), Expect = 3e-12 Identities = 35/54 (64%), Positives = 40/54 (74%), Gaps = 1/54 (1%) Frame = -2 Query: 419 IEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQ-AEGLTARGIPNSISI 261 IE ++ MN + LKNR GP K PYMLLYPNTSD T + +GLTA GIPNSISI Sbjct: 824 IENRIKDMNGNSALKNRNGPVKMPYMLLYPNTSDVTKEKGQGLTAMGIPNSISI 877
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 60.8 bits (146), Expect = 1e-09 Identities = 31/53 (58%), Positives = 37/53 (69%) Frame = -2 Query: 419 IEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 261 IEK+++ N D L+NR GPAK PY LLYP++ EGLT RGIPNSISI Sbjct: 807 IEKKLIEKNKDETLRNRYGPAKMPYTLLYPSSE------EGLTFRGIPNSISI 853
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 58.2 bits (139), Expect = 8e-09 Identities = 29/53 (54%), Positives = 36/53 (67%) Frame = -2 Query: 419 IEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 261 IE+++ N+D L+NR GP K PY LLYP++ EGLT RGIPNSISI Sbjct: 820 IEEKLTQRNNDESLRNRYGPVKMPYTLLYPSSE------EGLTCRGIPNSISI 866
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 58.2 bits (139), Expect = 8e-09 Identities = 30/53 (56%), Positives = 35/53 (66%) Frame = -2 Query: 419 IEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 261 IE ++ A NSDP L+NRTGP + PY LL H EGLT +GIPNSISI Sbjct: 818 IEGKINARNSDPSLRNRTGPVQLPYTLL------HRSSEEGLTFKGIPNSISI 864
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 57.8 bits (138), Expect = 1e-08 Identities = 29/53 (54%), Positives = 37/53 (69%) Frame = -2 Query: 419 IEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 261 IEK++ N+D +L+NR GP + PY LLYP++ EGLT RGIPNSISI Sbjct: 815 IEKKLTQRNNDEKLRNRHGPVEMPYTLLYPSSK------EGLTFRGIPNSISI 861
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 56.6 bits (135), Expect = 2e-08 Identities = 28/53 (52%), Positives = 34/53 (64%) Frame = -2 Query: 419 IEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 261 IE++++ N D L+NR GP K PY +L P D EGLT RGIPNSISI Sbjct: 815 IEEKIMGRNKDSSLRNRNGPVKMPYTVLLPTCED-----EGLTFRGIPNSISI 862
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 55.8 bits (133), Expect = 4e-08 Identities = 28/53 (52%), Positives = 35/53 (66%) Frame = -2 Query: 419 IEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 261 IE+++ N+D L NR GP + PY LL+PN +EGLT RGIPNSISI Sbjct: 820 IEEKLARKNNDQSLSNRLGPVQLPYTLLHPN-------SEGLTCRGIPNSISI 865
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 55.8 bits (133), Expect = 4e-08 Identities = 30/54 (55%), Positives = 38/54 (70%), Gaps = 1/54 (1%) Frame = -2 Query: 419 IEKQVVAMNSDPQLK-NRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 261 IE+++V N+DP L+ NR GP + PY LLYP++ EGLT RGIPNSISI Sbjct: 792 IEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSE------EGLTFRGIPNSISI 839
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 53.9 bits (128), Expect = 1e-07 Identities = 26/53 (49%), Positives = 34/53 (64%) Frame = -2 Query: 419 IEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 261 IE +++ MNS KNR+GP PY LL+P + EGLT +GIPNS+SI Sbjct: 813 IENRIMIMNSHKSWKNRSGPVNVPYTLLFPTSE------EGLTGKGIPNSVSI 859
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 53.1 bits (126), Expect = 3e-07 Identities = 27/53 (50%), Positives = 35/53 (66%) Frame = -2 Query: 419 IEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 261 IE ++ N+DP L +R GP + PY LL+P++ EGLT RGIPNSISI Sbjct: 818 IEAKLTNKNNDPSLYHRVGPVQLPYTLLHPSSK------EGLTFRGIPNSISI 864
>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)| Length = 741 Score = 53.1 bits (126), Expect = 3e-07 Identities = 27/47 (57%), Positives = 33/47 (70%) Frame = -2 Query: 419 IEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGI 279 IEK++V N+D L+NRTGPAK PY LLYP++ EGLT RGI Sbjct: 701 IEKKLVQKNNDETLRNRTGPAKMPYTLLYPSSE------EGLTFRGI 741
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 52.8 bits (125), Expect = 3e-07 Identities = 26/53 (49%), Positives = 33/53 (62%) Frame = -2 Query: 419 IEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 261 IEKQ++ N D L NR+GP PY LL+P + GLT +GIPNS+SI Sbjct: 815 IEKQIIQRNGDNILTNRSGPVNAPYTLLFPTSEG------GLTGKGIPNSVSI 861
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 52.8 bits (125), Expect = 3e-07 Identities = 27/53 (50%), Positives = 33/53 (62%) Frame = -2 Query: 419 IEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 261 IEK + N D LKNRTG K PY LL+P++ G+T RGIPNS+SI Sbjct: 813 IEKNIDERNDDETLKNRTGLVKMPYTLLFPSSEG------GVTGRGIPNSVSI 859
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 52.4 bits (124), Expect = 4e-07 Identities = 27/53 (50%), Positives = 35/53 (66%) Frame = -2 Query: 419 IEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 261 IE ++ N+D +L+NR GP + PY LL P++ EGLT RGIPNSISI Sbjct: 811 IENKLSERNNDEKLRNRCGPVQMPYTLLLPSSK------EGLTFRGIPNSISI 857
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 51.6 bits (122), Expect = 7e-07 Identities = 26/53 (49%), Positives = 33/53 (62%) Frame = -2 Query: 419 IEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 261 IEKQ++ N + L NRTGP PY LL+P + GLT +GIPNS+SI Sbjct: 814 IEKQIMQRNGNNILTNRTGPVNAPYTLLFPTSEG------GLTGKGIPNSVSI 860
>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)| Length = 899 Score = 42.7 bits (99), Expect = 3e-04 Identities = 19/52 (36%), Positives = 31/52 (59%) Frame = -2 Query: 416 EKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 261 E+++ N+DP +NR G PY L+ P++ G+T RG+PNS++I Sbjct: 854 EEEIERRNADPSRRNRCGAGVLPYELMAPSS------GPGITCRGVPNSVTI 899
>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)| (LOX-100) (LOX2:Hv:1) Length = 936 Score = 42.0 bits (97), Expect = 6e-04 Identities = 25/57 (43%), Positives = 31/57 (54%), Gaps = 4/57 (7%) Frame = -2 Query: 419 IEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTG----QAEGLTARGIPNSISI 261 I +QV N+DP KNR G PY+LL P+ D T + + GIPNSISI Sbjct: 880 IVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDGDPTDEKMVMEMGIPNSISI 936
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 40.0 bits (92), Expect = 0.002 Identities = 22/52 (42%), Positives = 29/52 (55%) Frame = -2 Query: 416 EKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 261 E+ + N+D KNR G PY LL P++ G+T RG+PNSISI Sbjct: 873 EETIERRNADHGRKNRCGAGVLPYELLAPSS------PPGVTCRGVPNSISI 918
>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:3) Length = 896 Score = 39.7 bits (91), Expect = 0.003 Identities = 22/45 (48%), Positives = 27/45 (60%) Frame = -2 Query: 395 NSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 261 N++P+ KNR G PY LL P + G+T RGIPNSISI Sbjct: 858 NNNPENKNRCGAGIVPYELLKPFSEP------GVTGRGIPNSISI 896
>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)| Length = 924 Score = 38.1 bits (87), Expect = 0.009 Identities = 22/53 (41%), Positives = 27/53 (50%) Frame = -2 Query: 419 IEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 261 IE + N D +LKNR G PY L+ P + G+T GIPNS SI Sbjct: 878 IEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSD------SGVTGMGIPNSTSI 924
>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC| 1.13.11.12) Length = 941 Score = 37.7 bits (86), Expect = 0.011 Identities = 22/53 (41%), Positives = 27/53 (50%) Frame = -2 Query: 419 IEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 261 IE + N D +LKNR G PY L+ P + G+T GIPNS SI Sbjct: 895 IEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSD------AGVTGMGIPNSTSI 941
>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:2) Length = 932 Score = 36.6 bits (83), Expect = 0.025 Identities = 22/53 (41%), Positives = 29/53 (54%) Frame = -2 Query: 419 IEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 261 I +QV N D +NR G PY+LL P + + A+ + GIPNSISI Sbjct: 881 IAEQVEEWNKDDSRRNRHGAGVVPYVLLRP-LNGNPMDAKTVMEMGIPNSISI 932
>LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13.11.12)| Length = 896 Score = 32.7 bits (73), Expect = 0.36 Identities = 22/53 (41%), Positives = 28/53 (52%) Frame = -2 Query: 419 IEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 261 +E + N + LKNR G Y LL P TS+H G+T G+P SISI Sbjct: 850 LEGVIDERNVNITLKNRAGAGVVKYELLKP-TSEH-----GVTGMGVPYSISI 896
>SEPP1_HUMAN (P49908) Selenoprotein P precursor (SeP)| Length = 381 Score = 31.2 bits (69), Expect = 1.0 Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 3/52 (5%) Frame = -1 Query: 420 HREAGGGHELGPAAQEPHR---AGQVPIHAALPKHLRPHGTGRGAHRQGHPE 274 H G LG + ++ A P H A P L H +G HRQGHPE Sbjct: 209 HHHNHGHQHLGSSELSENQQPGAPNAPTHPA-PPGLHHHHKHKGQHRQGHPE 259
>SYP_MYCTU (O05814) Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA| ligase) (ProRS) Length = 582 Score = 31.2 bits (69), Expect = 1.0 Identities = 20/40 (50%), Positives = 23/40 (57%) Frame = +3 Query: 240 TTDVLRSDGYAVRDAPGGEPLGLSRVVGGVWVEQHVWELG 359 T DVL DG VR G +G+SR+V V EQH ELG Sbjct: 438 TADVLGEDGKPVRLTMGSYGIGVSRLV-AVVAEQHHDELG 476
>GCSP_PROAC (Q6A9R8) Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2)| (Glycine decarboxylase) (Glycine cleavage system P-protein) Length = 994 Score = 30.4 bits (67), Expect = 1.8 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = -1 Query: 408 GGGHELGPAAQEPHRAGQVPIHAALPKHLRPHGTGRGAHRQGH 280 GGG +GP A + H A +P H P++ P G GH Sbjct: 724 GGGPGVGPVAAKAHLAPFLPGHPLNPRNEHPLNDGGTVTHDGH 766
>SEPP1_PONPY (Q5R8W9) Selenoprotein P precursor (SeP)| Length = 381 Score = 30.4 bits (67), Expect = 1.8 Identities = 15/30 (50%), Positives = 16/30 (53%) Frame = -1 Query: 363 AGQVPIHAALPKHLRPHGTGRGAHRQGHPE 274 A P H A P L H +G HRQGHPE Sbjct: 231 APDAPTHPA-PPGLHHHHKHKGQHRQGHPE 259
>KNOB_PLAFN (P06719) Knob-associated histidine-rich protein precursor (KAHRP)| Length = 657 Score = 29.6 bits (65), Expect = 3.0 Identities = 15/53 (28%), Positives = 21/53 (39%) Frame = -1 Query: 420 HREAGGGHELGPAAQEPHRAGQVPIHAALPKHLRPHGTGRGAHRQGHPEQHIH 262 H + H+ A H G+V H A H + HG + H H H+H Sbjct: 72 HHQHQAPHQAPHQAHHHHHHGEVN-HQAPQVHQQVHGQDQAHHHHHHHHHHLH 123
>FOXJ3_MOUSE (Q8BUR3) Forkhead box protein J3| Length = 623 Score = 29.3 bits (64), Expect = 3.9 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 4/47 (8%) Frame = -1 Query: 387 PAAQEPHRAGQVPIHAALPKHLRPHGTGRG----AHRQGHPEQHIHL 259 P+ PHR +P H P+H PH H Q HP H H+ Sbjct: 380 PSPHTPHRPHGLPQHPQRPQHPAPHPQQHSQLQPPHSQ-HPPPHQHI 425
>CX017_HUMAN (Q9NX05) Protein CXorf17 (Tumor antigen BJ-HCC-21)| Length = 1096 Score = 29.3 bits (64), Expect = 3.9 Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 1/54 (1%) Frame = -1 Query: 420 HREAGGGHELGPAAQEPHRAGQVPIHAALPKH-LRPHGTGRGAHRQGHPEQHIH 262 HR+ L P A R G VP+ LP L + G G R HP H H Sbjct: 40 HRQLPPTAALAPGAPRAAR-GSVPLQPPLPPAALGAYSGGAGPTRHHHPAHHFH 92
>FRIZ3_DROME (O77438) Protein frizzled-3 precursor (dFz3)| Length = 581 Score = 28.9 bits (63), Expect = 5.2 Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 5/72 (6%) Frame = -2 Query: 344 MLLYPNTSDHTGQ--AEGLTARGIPNSISI*SEHVRR---RDLMLLCYPCLLTPELACVC 180 M PN + HT Q AE A+ +P S S R L LC P + P AC Sbjct: 55 MTALPNLAGHTNQLEAELQIAKLVPLIESGCSRRARFLLCSSLFPLCTPDVPRPVAACKL 114 Query: 179 VCDRELCRCMNN 144 +C+ CM N Sbjct: 115 LCETVRGECMEN 126
>SEPP1_RAT (P25236) Selenoprotein P precursor (SeP) [Contains: Selenoprotein| Se-P10; Selenoprotein Se-P6; Selenoprotein Se-P2; Selenoprotein Se-P1] Length = 385 Score = 28.5 bits (62), Expect = 6.7 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 5/54 (9%) Frame = -1 Query: 420 HREAGGGHELGPAA-QEPHRAGQVPIHAALPK----HLRPHGTGRGAHRQGHPE 274 H + G LG + E + G + + +LP H H +G HRQGH E Sbjct: 209 HHDKHGHEHLGSSKPSENQQPGALDVETSLPPSGLHHHHHHHKHKGQHRQGHLE 262
>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2| Length = 1033 Score = 28.5 bits (62), Expect = 6.7 Identities = 19/58 (32%), Positives = 26/58 (44%) Frame = -1 Query: 405 GGHELGPAAQEPHRAGQVPIHAALPKHLRPHGTGRGAHRQGHPEQHIHLI*ARPSSRP 232 GG GP Q P G P ++P RP G G G G P + ++ RP++ P Sbjct: 262 GGQGGGPRPQAP--GGNRPSPGSMP---RPQGGGAGPRPGGGPRPNPGMMPQRPAAGP 314
>ALR1_SALTY (P0A1A3) Alanine racemase, biosynthetic (EC 5.1.1.1)| Length = 359 Score = 28.1 bits (61), Expect = 8.8 Identities = 16/36 (44%), Positives = 18/36 (50%) Frame = +3 Query: 252 LRSDGYAVRDAPGGEPLGLSRVVGGVWVEQHVWELG 359 L S AVRD GEP+G GG WV + LG Sbjct: 237 LTSSLIAVRDHKAGEPVG----YGGTWVSERDTRLG 268
>ALR1_SALTI (P0A1A4) Alanine racemase, biosynthetic (EC 5.1.1.1)| Length = 359 Score = 28.1 bits (61), Expect = 8.8 Identities = 16/36 (44%), Positives = 18/36 (50%) Frame = +3 Query: 252 LRSDGYAVRDAPGGEPLGLSRVVGGVWVEQHVWELG 359 L S AVRD GEP+G GG WV + LG Sbjct: 237 LTSSLIAVRDHKAGEPVG----YGGTWVSERDTRLG 268 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,117,889 Number of Sequences: 219361 Number of extensions: 1357777 Number of successful extensions: 3831 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 3671 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3797 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2286875994 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
