Clone Name | rbastl39g09 |
---|---|
Clone Library Name | barley_pub |
>BLNK_RAT (Q4KM52) B-cell linker protein (Cytoplasmic adapter protein)| Length = 457 Score = 28.5 bits (62), Expect = 4.1 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 8/88 (9%) Frame = -3 Query: 327 EYMYPLKQSEQSVR*VFERSPLITDVFPAPRSSVNANHGKK-VTCND**AGH-------V 172 +Y+ P++ ++++ E SPL + P S N K V+ AG Sbjct: 177 DYVVPVEDNDENYIHPRESSPLPAEKAPTVNRSTKPNSSSKHVSPPGTVAGRNSGVWDSK 236 Query: 171 IFLPASPCPLPRSSGVQVFSPLQSEGTP 88 LPA+P PLPR +G + +PL++ P Sbjct: 237 SSLPAAPSPLPR-AGKKTATPLKTTPVP 263
>OTC_MYCPA (Q740I5) Ornithine carbamoyltransferase (EC 2.1.3.3) (OTCase)| Length = 309 Score = 28.1 bits (61), Expect = 5.3 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 4/54 (7%) Frame = +1 Query: 208 LSVVSIHTGTWSWEYICYQGRSFEYLSH*LL--GLLEGIHV--FCPSGLPSVPQ 357 L ++ H G+ S +CY G ++H L+ G+ GIHV P G P+ Sbjct: 137 LQAIAEHKGSLSGLRMCYLGDGANNMAHSLMLGGVTAGIHVTIAAPDGFTPAPE 190
>MRP5_HUMAN (O15440) Multidrug resistance-associated protein 5 (Multi-specific| organic anion transporter-C) (MOAT-C) (pABC11) (SMRP) Length = 1437 Score = 28.1 bits (61), Expect = 5.3 Identities = 9/19 (47%), Positives = 17/19 (89%) Frame = +2 Query: 215 WLAFTLERGAGNTSVIRGD 271 WL++ +++G+GNT+V RG+ Sbjct: 879 WLSYWIKQGSGNTTVTRGN 897
>YL381_MIMIV (Q5UQX2) Hypothetical protein L381| Length = 280 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 10/55 (18%) Frame = +1 Query: 115 KNLNPTGSWKGARRSRKKNN--------MTCSSVVTRYLLSVVSI--HTGTWSWE 249 +NLNP G W G+ K +N +T V+ Y+ +++ H+ ++W+ Sbjct: 213 ENLNPVGVWTGSYNLSKTSNFSLENALYITSQIVIAEYIKEFLAVYKHSENFNWK 267
>ADH_THEBR (P14941) NADP-dependent alcohol dehydrogenase (EC 1.1.1.2)| Length = 352 Score = 28.1 bits (61), Expect = 5.3 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = -2 Query: 172 YFSSGFSLPPSKIQWGSGFFSFTIRG 95 YF G LP +++WG G TI+G Sbjct: 267 YFGEGEVLPVPRLEWGCGMAHKTIKG 292
>UBX_DROVI (Q24703) Homeotic protein ultrabithorax (Fragment)| Length = 87 Score = 27.3 bits (59), Expect = 9.1 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%) Frame = +2 Query: 185 HQSLHVTFFPWLAFTLERGAG-NTSVIRGDLS 277 HQ+ + TF+PW+A E A + S IR DL+ Sbjct: 15 HQASNHTFYPWMAIAGESTADPSKSKIRSDLT 46 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,613,189 Number of Sequences: 219361 Number of extensions: 1184004 Number of successful extensions: 2940 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2896 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2940 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 1386249648 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)