>ref|XM_466211.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2580

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                   
Query: 283  cggtcggtgagctttgtcgcccctatgcgccccagggccgcctcggcgagtttcc 337
            |||||||||||||| ||||| || ||||||| |||||| || |||||||| ||||
Sbjct: 2207 cggtcggtgagcttcgtcgcgccgatgcgcctcagggcggcgtcggcgagcttcc 2153

>ref|XM_466210.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3911

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                   
Query: 283  cggtcggtgagctttgtcgcccctatgcgccccagggccgcctcggcgagtttcc 337
            |||||||||||||| ||||| || ||||||| |||||| || |||||||| ||||
Sbjct: 3538 cggtcggtgagcttcgtcgcgccgatgcgcctcagggcggcgtcggcgagcttcc 3484

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                       
Query: 283      cggtcggtgagctttgtcgcccctatgcgccccagggccgcctcggcgagtttcc 337
                |||||||||||||| ||||| || ||||||| |||||| || |||||||| ||||
Sbjct: 21079153 cggtcggtgagcttcgtcgcgccgatgcgcctcagggcggcgtcggcgagcttcc 21079099

>dbj|AP004017.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1008_F08
          Length = 105979

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                    
Query: 283   cggtcggtgagctttgtcgcccctatgcgccccagggccgcctcggcgagtttcc 337
             |||||||||||||| ||||| || ||||||| |||||| || |||||||| ||||
Sbjct: 80898 cggtcggtgagcttcgtcgcgccgatgcgcctcagggcggcgtcggcgagcttcc 80844

>dbj|AK073875.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033074B12, full
            insert sequence
          Length = 3913

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                   
Query: 283  cggtcggtgagctttgtcgcccctatgcgccccagggccgcctcggcgagtttcc 337
            |||||||||||||| ||||| || ||||||| |||||| || |||||||| ||||
Sbjct: 3540 cggtcggtgagcttcgtcgcgccgatgcgcctcagggcggcgtcggcgagcttcc 3486

>dbj|AK066869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013083I21, full
            insert sequence
          Length = 2580

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                   
Query: 283  cggtcggtgagctttgtcgcccctatgcgccccagggccgcctcggcgagtttcc 337
            |||||||||||||| ||||| || ||||||| |||||| || |||||||| ||||
Sbjct: 2207 cggtcggtgagcttcgtcgcgccgatgcgcctcagggcggcgtcggcgagcttcc 2153

>emb|AL928717.5| Human DNA sequence from clone RP11-363G10 on chromosome X Contains the
              gene for family D 4 melanoma antigen (MAGED4) (KIAA1859,
              DKFZp761N1924, FLJ37222, FLJ25964), gene LOC349420
              (FLJ39060) and a CpG island, complete sequence
          Length = 186278

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 181    caaaaccagcaagacatttaca 202
              ||||||||||||||||||||||
Sbjct: 186187 caaaaccagcaagacatttaca 186166

>emb|AL953874.2| Human DNA sequence from clone CTD-2267G17 on chromosome X Contains
            the GAGED3 gene for family D G antigen 3, a GAGE family
            pseudogene and the 5' end of a pseudogene similar to part
            of family D G antigen 2 (GAGED2), complete sequence
          Length = 94514

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 181  caaaaccagcaagacatttaca 202
            ||||||||||||||||||||||
Sbjct: 1301 caaaaccagcaagacatttaca 1280

>gb|AC153760.3| Loxodonta africana clone VMRC15-151E6, complete sequence
          Length = 130127

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 23   tatatagaataactgtacaaaaaag 47
            |||| ||||||||||||||||||||
Sbjct: 3625 tatacagaataactgtacaaaaaag 3601

>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
          Length = 5751492

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 22      ttatatagaataactgtacaaaaaa 46
               |||||||||||||||||| ||||||
Sbjct: 4907287 ttatatagaataactgtataaaaaa 4907311

>emb|BX663516.23| Zebrafish DNA sequence from clone DKEY-16F21 in linkage group 10,
             complete sequence
          Length = 183367

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 18    gattttatatagaataactgt 38
             |||||||||||||||||||||
Sbjct: 34862 gattttatatagaataactgt 34882

>gb|AC170746.3| Loxodonta africana clone VMRC15-355K9, complete sequence
          Length = 122744

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 23     tatatagaataactgtacaaaaaag 47
              |||| ||||||||||||||||||||
Sbjct: 115742 tatacagaataactgtacaaaaaag 115718

>emb|AL513327.34| Human DNA sequence from clone RP11-415J8 on chromosome 1 Contains the
             gene for a novel protein (FLJ35476), the gene for a novel
             protein similar to ABO family protein, two novel genes,
             the PHC2 gene for polyhomeotic-like 2 (Drosophila) and two
             CpG islands, complete sequence
          Length = 188665

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 235   tctgatattgttgctactttgatt 258
             |||||| |||||||||||||||||
Sbjct: 81660 tctgattttgttgctactttgatt 81683

>emb|AL391121.29| Human DNA sequence from clone RP11-47A8 on chromosome 10 Contains the 3'
              end of the SUFU gene for suppressor of fused homolog
              (Drosophila), the TRIM8 gene for tripartite
              motif-containing 8, the ARL3 gene for ADP-ribosylation
              factor-like 3, the SFXN2 gene for sideroflexin 2 and three
              CpG islands, complete sequence
          Length = 166600

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 61     cttggacaaacaaaacagga 80
              ||||||||||||||||||||
Sbjct: 132268 cttggacaaacaaaacagga 132249

>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB
          Length = 1683333

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 325     tcggcgagtttcctgccctt 344
               ||||||||||||||||||||
Sbjct: 1207274 tcggcgagtttcctgccctt 1207255

>gb|AC103826.2| Homo sapiens chromosome 8, clone CTD-2054L19, complete sequence
          Length = 75715

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 239   atattgttgctactttgatt 258
             ||||||||||||||||||||
Sbjct: 52628 atattgttgctactttgatt 52647

>gb|AC087367.3| Homo sapiens chromosome 8, clone RP11-680O8, complete sequence
          Length = 133139

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 239    atattgttgctactttgatt 258
              ||||||||||||||||||||
Sbjct: 128541 atattgttgctactttgatt 128560

>emb|CR391063.1| Gallus gallus finished cDNA, clone ChEST191k14
          Length = 1699

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 34  actgtacaaaaaagccagcg 53
           ||||||||||||||||||||
Sbjct: 178 actgtacaaaaaagccagcg 197

>emb|AJ871176.1| Bos taurus ABCG2 gene, PKD2 gene and SPP1 gene, clone RPCI42_5K14
          Length = 171712

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 28     agaataactgtacaaaaaag 47
              ||||||||||||||||||||
Sbjct: 112930 agaataactgtacaaaaaag 112911

>gb|AC160019.2| Gallus gallus BAC clone CH261-50H15 from chromosome unknown, complete
              sequence
          Length = 228494

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 34     actgtacaaaaaagccagcg 53
              ||||||||||||||||||||
Sbjct: 220421 actgtacaaaaaagccagcg 220440

>gb|AC157951.2| Gallus gallus BAC clone CH261-173J5 from chromosome unknown, complete
              sequence
          Length = 206432

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 34     actgtacaaaaaagccagcg 53
              ||||||||||||||||||||
Sbjct: 116906 actgtacaaaaaagccagcg 116887


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,814,866
Number of Sequences: 3902068
Number of extensions: 2814866
Number of successful extensions: 49807
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 49741
Number of HSP's gapped (non-prelim): 66
length of query: 352
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 330
effective length of database: 17,147,199,772
effective search space: 5658575924760
effective search space used: 5658575924760
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)