>COPG_BOVIN (P53620) Coatomer subunit gamma (Gamma-coat protein) (Gamma-COP)|
          Length = 874

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
 Frame = -1

Query: 406 PAIWAMQWALSPPKAILEAPKVNLMDRIHVSPQAVRAVSEIGIRKIAPD-NRCIPSSTFQ 230
           PA+  +Q   S PKA L    V  ++++ +   +      + +  +  D NR I +    
Sbjct: 287 PAVSVLQLFCSSPKAALRYAAVRTLNKVAMKHPSAVTACNLDLENLVTDANRSIATLAIT 346

Query: 229 CEC*PRKEGNV*RLMSRSCYFSSGFS 152
                  EG++ RLM +   F S  S
Sbjct: 347 TLLKTGSEGSIDRLMKQISSFMSEIS 372

>BLNK_RAT (Q4KM52) B-cell linker protein (Cytoplasmic adapter protein)|
          Length = 457

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
 Frame = -2

Query: 327 EYMYPLKQSEQSVR*VFERSPLITDVFPAPRSSVNANHGKK-VTCND**AGH-------V 172
           +Y+ P++ ++++     E SPL  +  P    S   N   K V+     AG         
Sbjct: 177 DYVVPVEDNDENYIHPRESSPLPAEKAPTVNRSTKPNSSSKHVSPPGTVAGRNSGVWDSK 236

Query: 171 IFLPASPCPLPRSSGVQVFSPLQSEGTP 88
             LPA+P PLPR +G +  +PL++   P
Sbjct: 237 SSLPAAPSPLPR-AGKKTATPLKTTPVP 263

>ATX1_MOUSE (P54254) Ataxin-1 (Spinocerebellar ataxia type 1 protein homolog)|
          Length = 792

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 15/49 (30%), Positives = 21/49 (42%)
 Frame = +1

Query: 298 LGLLEGIHVFCPSGLPSVPQESPLGVTMPTALPK*QEAACIPATCNAHL 444
           +GLL+ +        PS P+  P   T+PT  P  Q    +     AHL
Sbjct: 74  MGLLKALSAGLDYSPPSAPRSVPTANTLPTVYPPPQSGTPVSPVQYAHL 122


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,570,293
Number of Sequences: 219361
Number of extensions: 1548953
Number of successful extensions: 3948
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3948
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)