ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl39e06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|CR407546.16| Zebrafish DNA sequence from clone CH211-276E3 i... 42 0.85
2emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome 42 0.85
3emb|AL590149.9| Zebrafish DNA sequence from clone RP71-36D5 in l... 42 0.85
4emb|BX664744.10| Zebrafish DNA sequence from clone CH211-226F3 i... 42 0.85
5emb|BX511266.14| Zebrafish DNA sequence from clone CH211-245D7 i... 42 0.85
6emb|CR394529.7| Zebrafish DNA sequence from clone CH211-121F17 i... 42 0.85
7emb|CR626864.10| Zebrafish DNA sequence from clone DKEY-156N14 i... 42 0.85
8emb|CR405703.5| Zebrafish DNA sequence from clone DKEYP-52E4 in ... 42 0.85
9emb|BX511253.13| Zebrafish DNA sequence from clone DKEY-45M5 in ... 42 0.85
10emb|BX321868.13| Zebrafish DNA sequence from clone RP71-41I21, c... 42 0.85
11emb|BX324110.10| Zebrafish DNA sequence from clone DKEY-250F19 i... 42 0.85
12emb|BX324146.10| Zebrafish DNA sequence from clone CH211-207C15 ... 42 0.85
13gb|AC020925.8| Homo sapiens chromosome 5 clone CTD-2134K2, compl... 42 0.85
14emb|BX284110.16| Zebrafish DNA sequence from clone DKEYP-67D7 in... 42 0.85
15gb|AC010468.5|AC010468 Homo sapiens chromosome 5 clone CTD-2290C... 42 0.85
16emb|BX088528.7| Zebrafish DNA sequence from clone CH211-226D23 i... 42 0.85
17dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome 42 0.85
18emb|BX004756.7| Zebrafish DNA sequence from clone CH211-59A4 in ... 42 0.85
19emb|AL954634.12| Zebrafish DNA sequence from clone DKEY-58C20 in... 42 0.85
20emb|AL929031.3| Zebrafish DNA sequence from clone CH211-255L18 i... 42 0.85
21emb|AL953910.14| Zebrafish DNA sequence from clone DKEY-31E10 in... 42 0.85
22emb|BX004829.12| Zebrafish DNA sequence from clone DKEY-29O15, c... 42 0.85
23emb|AL929299.10| Zebrafish DNA sequence from clone BUSM1-SL6, co... 42 0.85
24emb|AL953859.7| Zebrafish DNA sequence from clone DKEY-53P21, co... 42 0.85
25emb|AL935277.6| Zebrafish DNA sequence from clone CH211-250C16, ... 42 0.85
26gb|AC167240.5| Mus musculus BAC clone RP24-548A13 from chromosom... 40 3.3
27gb|AY229987.1| Cryptophlebia leucotreta granulovirus isolate CV3... 40 3.3
28emb|BX908777.15| Zebrafish DNA sequence from clone CH211-133H13 ... 40 3.3
29emb|CR387983.8| Zebrafish DNA sequence from clone DKEY-90D6 in l... 40 3.3
30gb|AC122436.4| Mus musculus BAC clone RP24-204P6 from chromosome... 40 3.3
31emb|CR848031.5| Zebrafish DNA sequence from clone DKEY-288I10 in... 40 3.3
32emb|CR356222.24| Zebrafish DNA sequence from clone DKEY-103J14 i... 40 3.3
33emb|CR376827.6| Zebrafish DNA sequence from clone CH211-154C21 i... 40 3.3
34emb|BX323825.19| Zebrafish DNA sequence from clone DKEYP-51B2 in... 40 3.3
35emb|AL662944.3|OSJN00134 Oryza sativa genomic DNA, chromosome 4,... 40 3.3
36emb|CR550304.13| Zebrafish DNA sequence from clone CH211-150I13 ... 40 3.3
37emb|CR847504.13| Zebrafish DNA sequence from clone DKEYP-51G9 in... 40 3.3
38emb|CR384103.7| Zebrafish DNA sequence from clone DKEY-215K6 in ... 40 3.3
39emb|BX571704.13| Zebrafish DNA sequence from clone DKEY-33M14 in... 40 3.3
40emb|BX276106.6| Zebrafish DNA sequence from clone DKEY-1N18 in l... 40 3.3
41emb|BX957239.7| Zebrafish DNA sequence from clone DKEY-173N20 in... 40 3.3
42emb|CR450725.6| Zebrafish DNA sequence from clone CH211-5A14 in ... 40 3.3
43emb|BX890597.13| Zebrafish DNA sequence from clone DKEY-65F8, co... 40 3.3
44emb|AL935031.12| Zebrafish DNA sequence from clone CH211-93I23, ... 40 3.3
45gb|AC114806.5| Homo sapiens BAC clone RP11-1251F13 from 4, compl... 40 3.3
46emb|BX321920.7| Zebrafish DNA sequence from clone DKEY-43F15 in ... 40 3.3
47emb|BX005140.18| Zebrafish DNA sequence from clone CH211-11F22, ... 40 3.3
48emb|BX511229.6| Zebrafish DNA sequence from clone CH211-194H2 in... 40 3.3
49emb|BX323874.4| Zebrafish DNA sequence from clone DKEY-104N21 in... 40 3.3
50emb|BX000985.18| Zebrafish DNA sequence from clone DKEY-13M3 in ... 40 3.3
51gb|AC159005.3| Mus musculus BAC clone RP23-67F4 from chromosome ... 40 3.3
52emb|BX571853.4| Zebrafish DNA sequence from clone DKEY-29H14 in ... 40 3.3
53dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.3
54dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.3
55emb|BX465852.6| Zebrafish DNA sequence from clone CH211-139A5 in... 40 3.3
56emb|BX649401.4| Zebrafish DNA sequence from clone DKEY-48E10 in ... 40 3.3
57emb|BX649448.10| Zebrafish DNA sequence from clone DKEY-169I5 in... 40 3.3
58emb|BX323807.8| Zebrafish DNA sequence from clone DKEY-154P10 in... 40 3.3
59emb|AL953916.14| Zebrafish DNA sequence from clone CH211-246I7 i... 40 3.3
60dbj|AP004999.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.3
61emb|BX005267.7| Zebrafish DNA sequence from clone DKEY-46K2 in l... 40 3.3
62emb|AL845168.5| Zebrafish DNA sequence from clone DKEY-91M11, co... 40 3.3
63emb|CT967325.1| Zebrafish DNA sequence from clone DKEY-25K11, co... 40 3.3
64emb|CR382336.11| Zebrafish DNA sequence from clone CH211-125A6 i... 40 3.3
65emb|BX855618.7| Zebrafish DNA sequence from clone CH211-69H5 in ... 40 3.3
66emb|BX547928.7| Zebrafish DNA sequence from clone DKEY-172O10 in... 40 3.3
67emb|BX000529.13| Zebrafish DNA sequence from clone DKEY-191N2 in... 40 3.3
68emb|BX004834.13| Zebrafish DNA sequence from clone CH211-42E22 i... 40 3.3
69emb|BX470164.10| Zebrafish DNA sequence from clone DKEY-24L11 in... 40 3.3
70emb|BX119962.3| Zebrafish DNA sequence from clone CH211-203L9 in... 40 3.3
71emb|CR749179.8| Zebrafish DNA sequence from clone DKEY-33A13 in ... 40 3.3
72emb|CR318629.4| Zebrafish DNA sequence from clone DKEY-30I24 in ... 40 3.3
73emb|BX004853.7| Zebrafish DNA sequence from clone DKEY-13O11, co... 40 3.3
74emb|BX001004.11| Zebrafish DNA sequence from clone DKEY-30N2 in ... 40 3.3
75emb|CR555293.8| Zebrafish DNA sequence from clone DKEY-23P14 in ... 40 3.3
76emb|BX248124.7| Zebrafish DNA sequence from clone CH211-214E3 in... 40 3.3
77emb|CR925805.14| Zebrafish DNA sequence from clone DKEY-99N20 in... 40 3.3
78emb|CR759813.6| Zebrafish DNA sequence from clone DKEY-150H10 in... 40 3.3
79emb|AL954327.12| Zebrafish DNA sequence from clone DKEY-18H14 in... 40 3.3
80emb|BX005063.7| Zebrafish DNA sequence from clone CH211-101D12, ... 40 3.3
81emb|AL928828.6| Zebrafish DNA sequence from clone CH211-30I2, co... 40 3.3
82gb|L25338.1|MUSFBP Mus musculus folate-binding protein gene, 5' end 40 3.3 
>emb|CR407546.16| Zebrafish DNA sequence from clone CH211-276E3 in linkage group 17,
             complete sequence
          Length = 103614

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 27    ataaagacagtaaaatcactg 47
             |||||||||||||||||||||
Sbjct: 70924 ataaagacagtaaaatcactg 70944
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>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome
          Length = 5205140

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 118   gattattaacttgttttcttc 138
             |||||||||||||||||||||
Sbjct: 38382 gattattaacttgttttcttc 38402
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>emb|AL590149.9| Zebrafish DNA sequence from clone RP71-36D5 in linkage group 17
             Contains the 3' part of a novel gene similar to KIAA0953,
             a novel gene similar to POMC (propiomelanocortin), a novel
             gene similar to FCN2 (ficolin 2), a novel gene similar to
             SNX9 (sorting nexin 9) and a CpG island, complete sequence
          Length = 167272

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 27    ataaagacagtaaaatcactg 47
             |||||||||||||||||||||
Sbjct: 61152 ataaagacagtaaaatcactg 61172
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>emb|BX664744.10| Zebrafish DNA sequence from clone CH211-226F3 in linkage group 8,
            complete sequence
          Length = 3967

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 27   ataaagacagtaaaatcactg 47
            |||||||||||||||||||||
Sbjct: 3034 ataaagacagtaaaatcactg 3054
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>emb|BX511266.14| Zebrafish DNA sequence from clone CH211-245D7 in linkage group 14,
              complete sequence
          Length = 160419

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 27     ataaagacagtaaaatcactg 47
              |||||||||||||||||||||
Sbjct: 142341 ataaagacagtaaaatcactg 142321
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>emb|CR394529.7| Zebrafish DNA sequence from clone CH211-121F17 in linkage group 24,
             complete sequence
          Length = 75984

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 27    ataaagacagtaaaatcactg 47
             |||||||||||||||||||||
Sbjct: 70189 ataaagacagtaaaatcactg 70209
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>emb|CR626864.10| Zebrafish DNA sequence from clone DKEY-156N14 in linkage group 2,
             complete sequence
          Length = 173100

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 27    ataaagacagtaaaatcactg 47
             |||||||||||||||||||||
Sbjct: 19038 ataaagacagtaaaatcactg 19058
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>emb|CR405703.5| Zebrafish DNA sequence from clone DKEYP-52E4 in linkage group 5,
             complete sequence
          Length = 81891

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 27    ataaagacagtaaaatcactg 47
             |||||||||||||||||||||
Sbjct: 26255 ataaagacagtaaaatcactg 26235
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>emb|BX511253.13| Zebrafish DNA sequence from clone DKEY-45M5 in linkage group 8,
            complete sequence
          Length = 216373

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 27   ataaagacagtaaaatcactg 47
            |||||||||||||||||||||
Sbjct: 1121 ataaagacagtaaaatcactg 1141
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>emb|BX321868.13| Zebrafish DNA sequence from clone RP71-41I21, complete sequence
          Length = 135717

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 27   ataaagacagtaaaatcactg 47
            |||||||||||||||||||||
Sbjct: 3010 ataaagacagtaaaatcactg 2990
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>emb|BX324110.10| Zebrafish DNA sequence from clone DKEY-250F19 in linkage group 3,
             complete sequence
          Length = 103014

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 27    ataaagacagtaaaatcactg 47
             |||||||||||||||||||||
Sbjct: 49549 ataaagacagtaaaatcactg 49569
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>emb|BX324146.10| Zebrafish DNA sequence from clone CH211-207C15 in linkage group 19,
              complete sequence
          Length = 230267

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 27     ataaagacagtaaaatcactg 47
              |||||||||||||||||||||
Sbjct: 224437 ataaagacagtaaaatcactg 224457
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>gb|AC020925.8| Homo sapiens chromosome 5 clone CTD-2134K2, complete sequence
          Length = 161452

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 180    gcagcagcactgcatgtaaat 200
              |||||||||||||||||||||
Sbjct: 144622 gcagcagcactgcatgtaaat 144602
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>emb|BX284110.16| Zebrafish DNA sequence from clone DKEYP-67D7 in linkage group 10,
             complete sequence
          Length = 179798

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 27    ataaagacagtaaaatcactg 47
             |||||||||||||||||||||
Sbjct: 32637 ataaagacagtaaaatcactg 32657
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>gb|AC010468.5|AC010468 Homo sapiens chromosome 5 clone CTD-2290C20, complete sequence
          Length = 122102

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 180   gcagcagcactgcatgtaaat 200
             |||||||||||||||||||||
Sbjct: 47231 gcagcagcactgcatgtaaat 47251
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>emb|BX088528.7| Zebrafish DNA sequence from clone CH211-226D23 in linkage group 1,
              complete sequence
          Length = 171618

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 27     ataaagacagtaaaatcactg 47
              |||||||||||||||||||||
Sbjct: 153913 ataaagacagtaaaatcactg 153933
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>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 118   gattattaacttgttttcttc 138
             |||||||||||||||||||||
Sbjct: 40171 gattattaacttgttttcttc 40191
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>emb|BX004756.7| Zebrafish DNA sequence from clone CH211-59A4 in linkage group 1, complete
              sequence
          Length = 169530

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 27     ataaagacagtaaaatcactg 47
              |||||||||||||||||||||
Sbjct: 116724 ataaagacagtaaaatcactg 116704
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>emb|AL954634.12| Zebrafish DNA sequence from clone DKEY-58C20 in linkage group 14,
              complete sequence
          Length = 195499

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 27     ataaagacagtaaaatcactg 47
              |||||||||||||||||||||
Sbjct: 117972 ataaagacagtaaaatcactg 117952
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>emb|AL929031.3| Zebrafish DNA sequence from clone CH211-255L18 in linkage group 17,
            complete sequence
          Length = 187548

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 27   ataaagacagtaaaatcactg 47
            |||||||||||||||||||||
Sbjct: 5751 ataaagacagtaaaatcactg 5771
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>emb|AL953910.14| Zebrafish DNA sequence from clone DKEY-31E10 in linkage group 1, complete
              sequence
          Length = 190793

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 27     ataaagacagtaaaatcactg 47
              |||||||||||||||||||||
Sbjct: 181340 ataaagacagtaaaatcactg 181360
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>emb|BX004829.12| Zebrafish DNA sequence from clone DKEY-29O15, complete sequence
          Length = 231581

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 27   ataaagacagtaaaatcactg 47
            |||||||||||||||||||||
Sbjct: 4717 ataaagacagtaaaatcactg 4737
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>emb|AL929299.10| Zebrafish DNA sequence from clone BUSM1-SL6, complete sequence
          Length = 72631

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 27    ataaagacagtaaaatcactg 47
             |||||||||||||||||||||
Sbjct: 11886 ataaagacagtaaaatcactg 11866
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>emb|AL953859.7| Zebrafish DNA sequence from clone DKEY-53P21, complete sequence
          Length = 203360

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 27     ataaagacagtaaaatcactg 47
              |||||||||||||||||||||
Sbjct: 155662 ataaagacagtaaaatcactg 155642
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>emb|AL935277.6| Zebrafish DNA sequence from clone CH211-250C16, complete sequence
          Length = 69315

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 27    ataaagacagtaaaatcactg 47
             |||||||||||||||||||||
Sbjct: 30437 ataaagacagtaaaatcactg 30457
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>gb|AC167240.5| Mus musculus BAC clone RP24-548A13 from chromosome 7, complete sequence
          Length = 218177

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 215    gccaatctggagaacttggc 234
              ||||||||||||||||||||
Sbjct: 181004 gccaatctggagaacttggc 181023
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>gb|AY229987.1| Cryptophlebia leucotreta granulovirus isolate CV3, complete genome
          Length = 110907

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 27    ataaagacagtaaaatcactggaa 50
             ||||||| ||||||||||||||||
Sbjct: 46489 ataaagagagtaaaatcactggaa 46466
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>emb|BX908777.15| Zebrafish DNA sequence from clone CH211-133H13 in linkage group 11,
             complete sequence
          Length = 88152

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    taaagacagtaaaatcactg 47
             ||||||||||||||||||||
Sbjct: 25107 taaagacagtaaaatcactg 25126
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>emb|CR387983.8| Zebrafish DNA sequence from clone DKEY-90D6 in linkage group 21,
             complete sequence
          Length = 131428

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    ataaagacagtaaaatcact 46
             ||||||||||||||||||||
Sbjct: 61144 ataaagacagtaaaatcact 61125
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>gb|AC122436.4| Mus musculus BAC clone RP24-204P6 from chromosome 8, complete sequence
          Length = 189469

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 18    tcttcggatataaagacagtaaaatcac 45
             ||||| |||||||| |||||||||||||
Sbjct: 40812 tcttctgatataaacacagtaaaatcac 40839
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>emb|CR848031.5| Zebrafish DNA sequence from clone DKEY-288I10 in linkage group 14,
              complete sequence
          Length = 160671

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 28     taaagacagtaaaatcactg 47
              ||||||||||||||||||||
Sbjct: 123615 taaagacagtaaaatcactg 123596
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>emb|CR356222.24| Zebrafish DNA sequence from clone DKEY-103J14 in linkage group 13,
             complete sequence
          Length = 206656

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    ataaagacagtaaaatcact 46
             ||||||||||||||||||||
Sbjct: 87206 ataaagacagtaaaatcact 87225
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>emb|CR376827.6| Zebrafish DNA sequence from clone CH211-154C21 in linkage group 14,
             complete sequence
          Length = 110290

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    ataaagacagtaaaatcact 46
             ||||||||||||||||||||
Sbjct: 33521 ataaagacagtaaaatcact 33502
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>emb|BX323825.19| Zebrafish DNA sequence from clone DKEYP-51B2 in linkage group 5, complete
              sequence
          Length = 185915

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 28     taaagacagtaaaatcactg 47
              ||||||||||||||||||||
Sbjct: 117941 taaagacagtaaaatcactg 117960
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>emb|AL662944.3|OSJN00134 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0028I23,
              complete sequence
          Length = 148736

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 174    cagcaggcagcagcactgca 193
              ||||||||||||||||||||
Sbjct: 114351 cagcaggcagcagcactgca 114332
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>emb|CR550304.13| Zebrafish DNA sequence from clone CH211-150I13 in linkage group 13,
             complete sequence
          Length = 118999

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    ataaagacagtaaaatcact 46
             ||||||||||||||||||||
Sbjct: 64528 ataaagacagtaaaatcact 64547
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>emb|CR847504.13| Zebrafish DNA sequence from clone DKEYP-51G9 in linkage group 4, complete
              sequence
          Length = 138906

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 28     taaagacagtaaaatcactg 47
              ||||||||||||||||||||
Sbjct: 110034 taaagacagtaaaatcactg 110053
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>emb|CR384103.7| Zebrafish DNA sequence from clone DKEY-215K6 in linkage group 5,
             complete sequence
          Length = 142808

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    ataaagacagtaaaatcact 46
             ||||||||||||||||||||
Sbjct: 58143 ataaagacagtaaaatcact 58124
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>emb|BX571704.13| Zebrafish DNA sequence from clone DKEY-33M14 in linkage group 9, complete
              sequence
          Length = 219065

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 27     ataaagacagtaaaatcact 46
              ||||||||||||||||||||
Sbjct: 140978 ataaagacagtaaaatcact 140959
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>emb|BX276106.6| Zebrafish DNA sequence from clone DKEY-1N18 in linkage group 6, complete
              sequence
          Length = 220671

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 28     taaagacagtaaaatcactg 47
              ||||||||||||||||||||
Sbjct: 161662 taaagacagtaaaatcactg 161643
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>emb|BX957239.7| Zebrafish DNA sequence from clone DKEY-173N20 in linkage group 19,
            complete sequence
          Length = 182432

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 28   taaagacagtaaaatcactg 47
            ||||||||||||||||||||
Sbjct: 3802 taaagacagtaaaatcactg 3783
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>emb|CR450725.6| Zebrafish DNA sequence from clone CH211-5A14 in linkage group 5, complete
              sequence
          Length = 186721

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 27     ataaagacagtaaaatcact 46
              ||||||||||||||||||||
Sbjct: 130028 ataaagacagtaaaatcact 130009
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>emb|BX890597.13| Zebrafish DNA sequence from clone DKEY-65F8, complete sequence
          Length = 244779

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 27     ataaagacagtaaaatcact 46
              ||||||||||||||||||||
Sbjct: 205246 ataaagacagtaaaatcact 205227
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>emb|AL935031.12| Zebrafish DNA sequence from clone CH211-93I23, complete sequence
          Length = 178457

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 27     ataaagacagtaaaatcact 46
              ||||||||||||||||||||
Sbjct: 161112 ataaagacagtaaaatcact 161131
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>gb|AC114806.5| Homo sapiens BAC clone RP11-1251F13 from 4, complete sequence
          Length = 138121

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 102   ctgaaatggggaaatggattattaacttgttt 133
             ||||||||||||||||||  |||||| |||||
Sbjct: 22448 ctgaaatggggaaatggaaaattaacatgttt 22417
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>emb|BX321920.7| Zebrafish DNA sequence from clone DKEY-43F15 in linkage group 16,
            complete sequence
          Length = 92059

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 27   ataaagacagtaaaatcact 46
            ||||||||||||||||||||
Sbjct: 2989 ataaagacagtaaaatcact 3008
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>emb|BX005140.18| Zebrafish DNA sequence from clone CH211-11F22, complete sequence
          Length = 177312

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    ataaagacagtaaaatcact 46
             ||||||||||||||||||||
Sbjct: 96372 ataaagacagtaaaatcact 96391
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>emb|BX511229.6| Zebrafish DNA sequence from clone CH211-194H2 in linkage group 11,
              complete sequence
          Length = 211986

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 27     ataaagacagtaaaatcact 46
              ||||||||||||||||||||
Sbjct: 107534 ataaagacagtaaaatcact 107515
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>emb|BX323874.4| Zebrafish DNA sequence from clone DKEY-104N21 in linkage group 16,
             complete sequence
          Length = 256605

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    taaagacagtaaaatcactg 47
             ||||||||||||||||||||
Sbjct: 98567 taaagacagtaaaatcactg 98586
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>emb|BX000985.18| Zebrafish DNA sequence from clone DKEY-13M3 in linkage group 15,
             complete sequence
          Length = 134752

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    ataaagacagtaaaatcact 46
             ||||||||||||||||||||
Sbjct: 57143 ataaagacagtaaaatcact 57124
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>gb|AC159005.3| Mus musculus BAC clone RP23-67F4 from chromosome 7, complete sequence
          Length = 230018

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 215   gccaatctggagaacttggc 234
             ||||||||||||||||||||
Sbjct: 12674 gccaatctggagaacttggc 12693
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>emb|BX571853.4| Zebrafish DNA sequence from clone DKEY-29H14 in linkage group 16,
              complete sequence
          Length = 191052

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 28     taaagacagtaaaatcactg 47
              ||||||||||||||||||||
Sbjct: 103829 taaagacagtaaaatcactg 103848
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 174      cagcaggcagcagcactgca 193
                ||||||||||||||||||||
Sbjct: 20867526 cagcaggcagcagcactgca 20867507
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 174      cagcaggcagcagcactgca 193
                ||||||||||||||||||||
Sbjct: 17439021 cagcaggcagcagcactgca 17439040
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>emb|BX465852.6| Zebrafish DNA sequence from clone CH211-139A5 in linkage group 5,
             complete sequence
          Length = 160041

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    taaagacagtaaaatcactg 47
             ||||||||||||||||||||
Sbjct: 24135 taaagacagtaaaatcactg 24154
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>emb|BX649401.4| Zebrafish DNA sequence from clone DKEY-48E10 in linkage group 4,
             complete sequence
          Length = 211817

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    ataaagacagtaaaatcact 46
             ||||||||||||||||||||
Sbjct: 52887 ataaagacagtaaaatcact 52868
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>emb|BX649448.10| Zebrafish DNA sequence from clone DKEY-169I5 in linkage group 22,
             complete sequence
          Length = 184512

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    ataaagacagtaaaatcact 46
             ||||||||||||||||||||
Sbjct: 22678 ataaagacagtaaaatcact 22659
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>emb|BX323807.8| Zebrafish DNA sequence from clone DKEY-154P10 in linkage group 2,
             complete sequence
          Length = 194313

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    ataaagacagtaaaatcact 46
             ||||||||||||||||||||
Sbjct: 77764 ataaagacagtaaaatcact 77783
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>emb|AL953916.14| Zebrafish DNA sequence from clone CH211-246I7 in linkage group 12,
              complete sequence
          Length = 177468

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 27     ataaagacagtaaaatcact 46
              ||||||||||||||||||||
Sbjct: 160908 ataaagacagtaaaatcact 160927
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>dbj|AP004999.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0040H05
          Length = 172623

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 174   cagcaggcagcagcactgca 193
             ||||||||||||||||||||
Sbjct: 51018 cagcaggcagcagcactgca 51037
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>emb|BX005267.7| Zebrafish DNA sequence from clone DKEY-46K2 in linkage group 19,
            complete sequence
          Length = 104035

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 27   ataaagacagtaaaatcact 46
            ||||||||||||||||||||
Sbjct: 9219 ataaagacagtaaaatcact 9200
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>emb|AL845168.5| Zebrafish DNA sequence from clone DKEY-91M11, complete sequence
          Length = 198627

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    ataaagacagtaaaatcact 46
             ||||||||||||||||||||
Sbjct: 12937 ataaagacagtaaaatcact 12918
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>emb|CT967325.1| Zebrafish DNA sequence from clone DKEY-25K11, complete sequence
          Length = 267826

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 27     ataaagacagtaaaatcact 46
              ||||||||||||||||||||
Sbjct: 265392 ataaagacagtaaaatcact 265373
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>emb|CR382336.11| Zebrafish DNA sequence from clone CH211-125A6 in linkage group 19,
            complete sequence
          Length = 175656

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 27   ataaagacagtaaaatcact 46
            ||||||||||||||||||||
Sbjct: 3195 ataaagacagtaaaatcact 3214
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>emb|BX855618.7| Zebrafish DNA sequence from clone CH211-69H5 in linkage group 4,
             complete sequence
          Length = 127818

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    ataaagacagtaaaatcact 46
             ||||||||||||||||||||
Sbjct: 17215 ataaagacagtaaaatcact 17196
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>emb|BX547928.7| Zebrafish DNA sequence from clone DKEY-172O10 in linkage group 4,
              complete sequence
          Length = 228177

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 27     ataaagacagtaaaatcact 46
              ||||||||||||||||||||
Sbjct: 158969 ataaagacagtaaaatcact 158988
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>emb|BX000529.13| Zebrafish DNA sequence from clone DKEY-191N2 in linkage group 3, complete
              sequence
          Length = 231807

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 27     ataaagacagtaaaatcact 46
              ||||||||||||||||||||
Sbjct: 155813 ataaagacagtaaaatcact 155794
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>emb|BX004834.13| Zebrafish DNA sequence from clone CH211-42E22 in linkage group 18,
              complete sequence
          Length = 188895

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 27     ataaagacagtaaaatcact 46
              ||||||||||||||||||||
Sbjct: 105654 ataaagacagtaaaatcact 105673
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>emb|BX470164.10| Zebrafish DNA sequence from clone DKEY-24L11 in linkage group 18,
              complete sequence
          Length = 248419

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 27     ataaagacagtaaaatcact 46
              ||||||||||||||||||||
Sbjct: 214669 ataaagacagtaaaatcact 214688
to top
>emb|BX119962.3| Zebrafish DNA sequence from clone CH211-203L9 in linkage group 19,
             complete sequence
          Length = 190702

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    taaagacagtaaaatcactg 47
             ||||||||||||||||||||
Sbjct: 99197 taaagacagtaaaatcactg 99216
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>emb|CR749179.8| Zebrafish DNA sequence from clone DKEY-33A13 in linkage group 11,
             complete sequence
          Length = 90503

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    ataaagacagtaaaatcact 46
             ||||||||||||||||||||
Sbjct: 33456 ataaagacagtaaaatcact 33475
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>emb|CR318629.4| Zebrafish DNA sequence from clone DKEY-30I24 in linkage group 23,
             complete sequence
          Length = 89377

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    ataaagacagtaaaatcact 46
             ||||||||||||||||||||
Sbjct: 26738 ataaagacagtaaaatcact 26757
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>emb|BX004853.7| Zebrafish DNA sequence from clone DKEY-13O11, complete sequence
          Length = 182526

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 27     ataaagacagtaaaatcact 46
              ||||||||||||||||||||
Sbjct: 135883 ataaagacagtaaaatcact 135864
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>emb|BX001004.11| Zebrafish DNA sequence from clone DKEY-30N2 in linkage group 5,
             complete sequence
          Length = 82272

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    ataaagacagtaaaatcact 46
             ||||||||||||||||||||
Sbjct: 76618 ataaagacagtaaaatcact 76637
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>emb|CR555293.8| Zebrafish DNA sequence from clone DKEY-23P14 in linkage group 11,
              complete sequence
          Length = 220631

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 27     ataaagacagtaaaatcact 46
              ||||||||||||||||||||
Sbjct: 158653 ataaagacagtaaaatcact 158672
to top
>emb|BX248124.7| Zebrafish DNA sequence from clone CH211-214E3 in linkage group 12,
              complete sequence
          Length = 211571

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 28     taaagacagtaaaatcactg 47
              ||||||||||||||||||||
Sbjct: 167130 taaagacagtaaaatcactg 167149
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>emb|CR925805.14| Zebrafish DNA sequence from clone DKEY-99N20 in linkage group 16,
             complete sequence
          Length = 180576

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    ataaagacagtaaaatcact 46
             ||||||||||||||||||||
Sbjct: 20534 ataaagacagtaaaatcact 20553
to top
>emb|CR759813.6| Zebrafish DNA sequence from clone DKEY-150H10 in linkage group 18,
              complete sequence
          Length = 152902

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 28     taaagacagtaaaatcactg 47
              ||||||||||||||||||||
Sbjct: 122488 taaagacagtaaaatcactg 122507
to top
>emb|AL954327.12| Zebrafish DNA sequence from clone DKEY-18H14 in linkage group 16,
             complete sequence
          Length = 237124

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    taaagacagtaaaatcactg 47
             ||||||||||||||||||||
Sbjct: 67469 taaagacagtaaaatcactg 67450
to top
>emb|BX005063.7| Zebrafish DNA sequence from clone CH211-101D12, complete sequence
          Length = 24458

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    taaagacagtaaaatcactg 47
             ||||||||||||||||||||
Sbjct: 20964 taaagacagtaaaatcactg 20945
to top
>emb|AL928828.6| Zebrafish DNA sequence from clone CH211-30I2, complete sequence
          Length = 169046

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 27     ataaagacagtaaaatcact 46
              ||||||||||||||||||||
Sbjct: 126149 ataaagacagtaaaatcact 126168
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>gb|L25338.1|MUSFBP Mus musculus folate-binding protein gene, 5' end
          Length = 1565

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 215 gccaatctggagaacttggc 234
           ||||||||||||||||||||
Sbjct: 582 gccaatctggagaacttggc 601


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,392,255
Number of Sequences: 3902068
Number of extensions: 2392255
Number of successful extensions: 49810
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 49603
Number of HSP's gapped (non-prelim): 207
length of query: 258
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 236
effective length of database: 17,147,199,772
effective search space: 4046739146192
effective search space used: 4046739146192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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