ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbastl39e04 |
|---|---|
| Clone Library Name | barley_pub |
>HBG_GALCR (P19760) Hemoglobin gamma subunit (Hemoglobin gamma chain)| (Gamma-globin) Length = 146 Score = 30.8 bits (68), Expect = 1.4 Identities = 12/29 (41%), Positives = 19/29 (65%) Frame = +3 Query: 225 NCSMIVLQRHFSRKFFPALAAACSQVANG 311 N +IVL +HF ++F P + AAC ++ G Sbjct: 108 NVLVIVLAKHFGKEFTPQIQAACQKMVAG 136
>HBB_BRATR (P14526) Hemoglobin beta subunit (Hemoglobin beta chain)| (Beta-globin) Length = 146 Score = 30.4 bits (67), Expect = 1.8 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = +3 Query: 225 NCSMIVLQRHFSRKFFPALAAACSQVANG 311 N +IVL RHF ++F P L AA +V G Sbjct: 108 NVLVIVLARHFGKEFTPQLQAAYQKVTTG 136
>HBB_ANTPA (P14388) Hemoglobin beta subunit (Hemoglobin beta chain)| (Beta-globin) Length = 146 Score = 30.0 bits (66), Expect = 2.3 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = +3 Query: 225 NCSMIVLQRHFSRKFFPALAAACSQVANG 311 N MIVL RHF ++F P + AA +V+ G Sbjct: 108 NVLMIVLARHFGKEFCPPVQAAFQKVSLG 136
>TA2R3_PANTR (Q646A7) Taste receptor type 2 member 3 (T2R3)| Length = 315 Score = 30.0 bits (66), Expect = 2.3 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Frame = +2 Query: 113 WITFC-AVIY-IKYLKYTHLAMIWGSWACSR*LLLFLIFKLQYDCPSEAFL 259 W+ C V+Y +K ++H +W W SR ++ L+ L C S A L Sbjct: 97 WLATCLGVLYCLKIASFSHPTFLWLKWRVSRVMVWMLLGALLLSCGSTASL 147
>TA2R3_PANPA (Q646D2) Taste receptor type 2 member 3 (T2R3)| Length = 315 Score = 30.0 bits (66), Expect = 2.3 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Frame = +2 Query: 113 WITFC-AVIY-IKYLKYTHLAMIWGSWACSR*LLLFLIFKLQYDCPSEAFL 259 W+ C V+Y +K ++H +W W SR ++ L+ L C S A L Sbjct: 97 WLATCLGVLYCLKIASFSHPTFLWLKWRVSRVMVWMLLGALLLSCGSTASL 147
>TA2R3_HUMAN (Q9NYW6) Taste receptor type 2 member 3 (T2R3)| Length = 315 Score = 30.0 bits (66), Expect = 2.3 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Frame = +2 Query: 113 WITFC-AVIY-IKYLKYTHLAMIWGSWACSR*LLLFLIFKLQYDCPSEAFL 259 W+ C V+Y +K ++H +W W SR ++ L+ L C S A L Sbjct: 97 WLATCLGVLYCLKIASFSHPTFLWLKWRVSRVMVWMLLGALLLSCGSTASL 147
>TA2R3_GORGO (Q645Y5) Taste receptor type 2 member 3 (T2R3)| Length = 315 Score = 30.0 bits (66), Expect = 2.3 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Frame = +2 Query: 113 WITFC-AVIY-IKYLKYTHLAMIWGSWACSR*LLLFLIFKLQYDCPSEAFL 259 W+ C V+Y +K ++H +W W SR ++ L+ L C S A L Sbjct: 97 WLATCLGVLYCLKIASFSHPTFLWLKWRVSRVMVWMLLGALLLSCGSTASL 147
>T2R16_PONPY (Q645U1) Taste receptor type 2 member 16 (T2R16)| Length = 291 Score = 30.0 bits (66), Expect = 2.3 Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 2/77 (2%) Frame = +2 Query: 17 LVNTVSGYLNCRRTLCYCDHKMHKKYI*FFTYWITFCAVIY--IKYLKYTHLAMIWGSWA 190 ++N YLN LC + + ++ T+W+ ++ IK +TH +W W Sbjct: 64 MLNNFCSYLNLNYVLC--NLTITWEFFNILTFWLNSLLTVFYCIKVSSFTHHIFLWVRWR 121 Query: 191 CSR*LLLFLIFKLQYDC 241 R L+ L C Sbjct: 122 ILRWFPWILLGSLTIAC 138
>HBB_BALAC (P18984) Hemoglobin beta subunit (Hemoglobin beta chain)| (Beta-globin) Length = 146 Score = 29.6 bits (65), Expect = 3.0 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = +3 Query: 225 NCSMIVLQRHFSRKFFPALAAACSQVANG 311 N +IVL RHF ++F P L AA +V G Sbjct: 108 NVLVIVLARHFGKEFTPELQAAYQKVVAG 136
>TA2R3_PONPY (Q645U2) Taste receptor type 2 member 3 (T2R3)| Length = 315 Score = 29.6 bits (65), Expect = 3.0 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Frame = +2 Query: 113 WITFC-AVIY-IKYLKYTHLAMIWGSWACSR*LLLFLIFKLQYDCPSEAFL 259 W+ C V+Y +K ++H +W W SR ++ L+ L C S A L Sbjct: 97 WLATCLGVLYCLKIASFSHPTFLWLKWRVSRVMVWMLLGVLLLSCGSTASL 147
>TA2R3_PAPHA (Q646E8) Taste receptor type 2 member 3 (T2R3)| Length = 315 Score = 29.3 bits (64), Expect = 3.9 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%) Frame = +2 Query: 113 WITFC-AVIY-IKYLKYTHLAMIWGSWACSR*LLLFLIFKLQYDCPSEAFL 259 W C V+Y +K ++H +W W SR ++ L+ L C S A L Sbjct: 97 WFATCLGVLYCLKIASFSHPTFLWLKWRVSRVMVWMLLGALLLSCGSTASL 147
>HBB_TACAC (P02110) Hemoglobin beta subunit (Hemoglobin beta chain)| (Beta-globin) Length = 146 Score = 28.9 bits (63), Expect = 5.1 Identities = 12/29 (41%), Positives = 19/29 (65%) Frame = +3 Query: 225 NCSMIVLQRHFSRKFFPALAAACSQVANG 311 N ++VL RHFS++F P AA ++ +G Sbjct: 108 NVLVVVLARHFSKEFTPEAQAAWQKLVSG 136
>HBB_ORNAN (P02111) Hemoglobin beta subunit (Hemoglobin beta chain)| (Beta-globin) Length = 146 Score = 28.9 bits (63), Expect = 5.1 Identities = 12/29 (41%), Positives = 19/29 (65%) Frame = +3 Query: 225 NCSMIVLQRHFSRKFFPALAAACSQVANG 311 N ++VL RHFS+ F P + AA ++ +G Sbjct: 108 NVLIVVLARHFSKDFSPEVQAAWQKLVSG 136
>T2R16_PANTR (Q646B3) Taste receptor type 2 member 16 (T2R16)| Length = 291 Score = 28.9 bits (63), Expect = 5.1 Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 2/77 (2%) Frame = +2 Query: 17 LVNTVSGYLNCRRTLCYCDHKMHKKYI*FFTYWITFCAVIY--IKYLKYTHLAMIWGSWA 190 ++N Y N LC + + ++ T+W+ ++ IK +TH +W W Sbjct: 64 MLNNFCSYFNLNYVLC--NLTITWEFFNILTFWLNSLLTVFYCIKVSSFTHHIFLWLRWR 121 Query: 191 CSR*LLLFLIFKLQYDC 241 R L+ L C Sbjct: 122 ILRLFPWILLGSLMITC 138
>T2R16_HUMAN (Q9NYV7) Taste receptor type 2 member 16 (T2R16)| Length = 291 Score = 28.9 bits (63), Expect = 5.1 Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 2/77 (2%) Frame = +2 Query: 17 LVNTVSGYLNCRRTLCYCDHKMHKKYI*FFTYWITFCAVIY--IKYLKYTHLAMIWGSWA 190 ++N Y N LC + + ++ T+W+ ++ IK +TH +W W Sbjct: 64 MLNNFCSYFNLNYVLC--NLTITWEFFNILTFWLNSLLTVFYCIKVSSFTHHIFLWLRWR 121 Query: 191 CSR*LLLFLIFKLQYDC 241 R L+ L C Sbjct: 122 ILRLFPWILLGSLMITC 138
>T2R16_PANPA (Q646D1) Taste receptor type 2 member 16 (T2R16)| Length = 291 Score = 28.5 bits (62), Expect = 6.7 Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 2/77 (2%) Frame = +2 Query: 17 LVNTVSGYLNCRRTLCYCDHKMHKKYI*FFTYWITFCAVIY--IKYLKYTHLAMIWGSWA 190 ++N Y N LC + + ++ T+W+ ++ IK +TH +W W Sbjct: 64 MLNNFCSYFNLNYVLC--NLTITWEFFNILTFWLNSLLTVFYCIKASSFTHHIFLWLRWR 121 Query: 191 CSR*LLLFLIFKLQYDC 241 R L+ L C Sbjct: 122 ILRLFPWILLGSLMITC 138
>T2R16_GORGO (Q645Y4) Taste receptor type 2 member 16 (T2R16)| Length = 291 Score = 28.5 bits (62), Expect = 6.7 Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 2/77 (2%) Frame = +2 Query: 17 LVNTVSGYLNCRRTLCYCDHKMHKKYI*FFTYWITFCAVIY--IKYLKYTHLAMIWGSWA 190 ++N Y N LC + + ++ T+W+ ++ IK +TH +W W Sbjct: 64 MLNBFCSYFNLNYVLC--NLTITWEFFNILTFWLNSLLTVFYCIKVSSFTHHIFLWLRWR 121 Query: 191 CSR*LLLFLIFKLQYDC 241 R L+ L C Sbjct: 122 ILRLFPWILLGSLMITC 138
>HBE2_CAPHI (P02105) Hemoglobin epsilon-2 subunit (Hemoglobin epsilon-2 chain)| (Epsilon-2-globin) (Hemoglobin epsilon-II chain) Length = 146 Score = 28.1 bits (61), Expect = 8.8 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = +3 Query: 225 NCSMIVLQRHFSRKFFPALAAACSQVAN 308 N +IVL HFS++F P + AA ++ N Sbjct: 108 NMILIVLATHFSKEFTPQMQAAWQKLTN 135
>HBE2_BOVIN (P06642) Hemoglobin epsilon-2 subunit (Hemoglobin epsilon-2 chain)| (Epsilon-2-globin) Length = 146 Score = 28.1 bits (61), Expect = 8.8 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = +3 Query: 225 NCSMIVLQRHFSRKFFPALAAACSQVAN 308 N +IVL HFS++F P + AA ++ N Sbjct: 108 NMILIVLATHFSKEFTPQMQAAWQKLTN 135
>HBD_LOXAF (Q45XJ0) Hemoglobin delta subunit (Hemoglobin delta chain)| (Delta-globin) Length = 146 Score = 28.1 bits (61), Expect = 8.8 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +3 Query: 225 NCSMIVLQRHFSRKFFPALAAACSQVANG 311 N +IVL RHF ++F P + AA +V G Sbjct: 108 NVLVIVLARHFGKEFTPDVQAAYEKVVAG 136
>HBD_ELEMA (Q45XI9) Hemoglobin delta subunit (Hemoglobin delta chain)| (Delta-globin) Length = 146 Score = 28.1 bits (61), Expect = 8.8 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +3 Query: 225 NCSMIVLQRHFSRKFFPALAAACSQVANG 311 N +IVL RHF ++F P + AA +V G Sbjct: 108 NVLVIVLARHFGKEFTPDVQAAYEKVVAG 136
>HBB_LOXAF (P02085) Hemoglobin beta subunit (Hemoglobin beta chain)| (Beta-globin) Length = 146 Score = 28.1 bits (61), Expect = 8.8 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +3 Query: 225 NCSMIVLQRHFSRKFFPALAAACSQVANG 311 N +IVL RHF ++F P + AA +V G Sbjct: 108 NVLVIVLARHFGKEFTPDVQAAYEKVVAG 136
>HBB_ELEMA (P02084) Hemoglobin beta subunit (Hemoglobin beta chain)| (Beta-globin) Length = 146 Score = 28.1 bits (61), Expect = 8.8 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +3 Query: 225 NCSMIVLQRHFSRKFFPALAAACSQVANG 311 N +IVL RHF ++F P + AA +V G Sbjct: 108 NVLVIVLARHFGKEFTPDVQAAYEKVVAG 136
>TA2R3_MOUSE (Q7TQA7) Taste receptor type 2 member 3 (T2R3) (T2R137) (T2R37)| (mT2r41) Length = 316 Score = 28.1 bits (61), Expect = 8.8 Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Frame = +2 Query: 104 FTYWITFCAVIY--IKYLKYTHLAMIWGSWACSR*LLLFLIFKLQYDCPS 247 F+ W+ C ++ +K ++H + +W W SR ++ L L C S Sbjct: 95 FSIWLISCLSVFYCLKIASFSHPSFLWLKWRASRVVVGMLWGALLLSCVS 144
>BCES_BACHD (Q9K620) Sensor protein bceS (EC 2.7.13.3)| Length = 334 Score = 28.1 bits (61), Expect = 8.8 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = +3 Query: 285 AACSQVANGDTITVTLPKQNRYKYTLYM 368 A S V G T T+T PK+N + TL M Sbjct: 307 AVSSTVGEGTTFTLTFPKENEFVRTLGM 334
>FBXL7_HUMAN (Q9UJT9) F-box/LRR-repeat protein 7 (F-box and leucine-rich repeat| protein 7) (F-box protein FBL6/FBL7) Length = 491 Score = 28.1 bits (61), Expect = 8.8 Identities = 13/38 (34%), Positives = 16/38 (42%) Frame = -3 Query: 208 QKSPAACPRTPDHGQVSVF*VFDIYYSTKCYPVCEESY 95 QK A+ R PDH V +F +C VC Y Sbjct: 108 QKEQASIDRLPDHSMVQIFSFLPTNQLCRCARVCRRWY 145 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,876,934 Number of Sequences: 219361 Number of extensions: 1329248 Number of successful extensions: 2890 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 2859 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2890 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2278320915 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
