Clone Name | rbastl39e04 |
---|---|
Clone Library Name | barley_pub |
>gb|AC130187.4| Atelerix albiventris clone LB4-344F17, complete sequence Length = 150117 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 76 taaaatgcacaagaaatacat 96 ||||||||||||||||||||| Sbjct: 101323 taaaatgcacaagaaatacat 101343
>gb|AC022306.6| Homo sapiens chromosome 15 clone RP11-295H24 map 15q21.1, complete sequence Length = 176827 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 136 atatatcaaatacctaaaata 156 ||||||||||||||||||||| Sbjct: 103042 atatatcaaatacctaaaata 103022
>gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold Length = 2136267 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 76 taaaatgcacaagaaatacat 96 ||||||||||||||||||||| Sbjct: 1797203 taaaatgcacaagaaatacat 1797223
>gb|AC130784.3| Atelerix albiventris clone LB4-112D1, complete sequence Length = 166122 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 76 taaaatgcacaagaaatacat 96 ||||||||||||||||||||| Sbjct: 23213 taaaatgcacaagaaatacat 23233
>emb|AL607074.13| Mouse DNA sequence from clone RP23-174M9 on chromosome 4, complete sequence Length = 204428 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 tgattgtccttcagaggcatt 255 ||||||||||||||||||||| Sbjct: 166170 tgattgtccttcagaggcatt 166150
>gb|AC125670.4| Rattus norvegicus BAC CH230-113E22 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 103836 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 atgatctggggttcttgggc 189 |||||||||||||||||||| Sbjct: 35578 atgatctggggttcttgggc 35559
>gb|AC113301.7| Mus musculus chromosome 8, clone RP23-430G7, complete sequence Length = 195985 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 caagaaatacatatgattct 104 |||||||||||||||||||| Sbjct: 42721 caagaaatacatatgattct 42740
>emb|BX572101.1| Prochlorococcus marinus MIT9313 complete genome; segment 7/7 Length = 318136 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 209 ctattcctaatattcaaactgcag 232 ||||||||| |||||||||||||| Sbjct: 305332 ctattcctactattcaaactgcag 305355
>gb|AC018515.7| Homo sapiens chromosome , clone RP11-250G15, complete sequence Length = 123722 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 acacaattacagtgaccttg 332 |||||||||||||||||||| Sbjct: 98718 acacaattacagtgaccttg 98699
>gb|AC149572.14| Medicago truncatula clone mth2-116e22, complete sequence Length = 120017 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 taatatatatcaaataccta 151 |||||||||||||||||||| Sbjct: 113963 taatatatatcaaataccta 113982
>gb|AC093259.2| Homo sapiens chromosome 5 clone RP11-229C3, complete sequence Length = 183380 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 cataaaatgcacaagaaatacata 97 ||||||||||| |||||||||||| Sbjct: 151460 cataaaatgcaaaagaaatacata 151483
>dbj|AK053081.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:D930046F11 product:unclassifiable, full insert sequence Length = 4509 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 caagaaatacatatgattct 104 |||||||||||||||||||| Sbjct: 3075 caagaaatacatatgattct 3056
>gb|AC008339.2|AC008339 Drosophila melanogaster, chromosome 2R, region 42A-42A, BAC clone BACR13P06, complete sequence Length = 180699 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 taaaatgcacaagaaatacatatg 99 |||||||||||||| ||||||||| Sbjct: 54125 taaaatgcacaagacatacatatg 54148
>gb|AC009255.4|AC009255 Drosophila melanogaster, chromosome 2R, region 42A-42A, BAC clone BACR39E09, complete sequence Length = 163990 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 taaaatgcacaagaaatacatatg 99 |||||||||||||| ||||||||| Sbjct: 97950 taaaatgcacaagacatacatatg 97973
>gb|AC022309.16|AC022309 Homo sapiens chromosome 15 clone RP11-67O17, complete sequence Length = 172482 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 acacaattacagtgaccttg 332 |||||||||||||||||||| Sbjct: 155379 acacaattacagtgaccttg 155360
>gb|AC007121.1|AC007121 Drosophila melanogaster, chromosome 2R, region 42A8-42A16, P1 clones DS06954 and DS05325, complete sequence Length = 135182 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 taaaatgcacaagaaatacatatg 99 |||||||||||||| ||||||||| Sbjct: 90817 taaaatgcacaagacatacatatg 90794
>gb|AE003784.5| Drosophila melanogaster chromosome 2R, section 5 of 73 of the complete sequence Length = 305162 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 taaaatgcacaagaaatacatatg 99 |||||||||||||| ||||||||| Sbjct: 116612 taaaatgcacaagacatacatatg 116635
>emb|CT030243.8| M.truncatula DNA sequence from clone MTH2-72K5 on chromosome 3, complete sequence Length = 111036 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 taatatatatcaaataccta 151 |||||||||||||||||||| Sbjct: 732 taatatatatcaaataccta 751
>emb|AL928547.12| Mouse DNA sequence from clone RP23-226B16 on chromosome 2, complete sequence Length = 131255 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 tgcaggaggacactgtgtta 66 |||||||||||||||||||| Sbjct: 20500 tgcaggaggacactgtgtta 20519
>emb|CT025624.11| Mouse DNA sequence from clone RP24-212N20 on chromosome 14, complete sequence Length = 198113 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 ttacagtgaccttgcccaag 338 |||||||||||||||||||| Sbjct: 102003 ttacagtgaccttgcccaag 102022
>gb|AC122435.5| Mus musculus BAC clone RP24-199D4 from 8, complete sequence Length = 161717 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 caagaaatacatatgattct 104 |||||||||||||||||||| Sbjct: 40421 caagaaatacatatgattct 40402
>emb|AL808120.9| Mouse DNA sequence from clone RP23-418E2 on chromosome X, complete sequence Length = 148328 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 ataaaatgcacaagaaatacatat 98 ||||||||||||||||| |||||| Sbjct: 107269 ataaaatgcacaagaaacacatat 107292 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,079,803 Number of Sequences: 3902068 Number of extensions: 5079803 Number of successful extensions: 83669 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 22 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 83624 Number of HSP's gapped (non-prelim): 45 length of query: 423 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 401 effective length of database: 17,147,199,772 effective search space: 6876027108572 effective search space used: 6876027108572 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)