Clone Name | rbastl39e02 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | CCPR_YARLI (Q6C0Z6) Cytochrome c peroxidase, mitochondrial precu... | 29 | 3.8 | 2 | MIPO1_HUMAN (Q8TD10) Mirror-image polydactyly gene 1 protein | 28 | 8.5 |
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>CCPR_YARLI (Q6C0Z6) Cytochrome c peroxidase, mitochondrial precursor (EC| 1.11.1.5) (CCP) Length = 340 Score = 28.9 bits (63), Expect = 3.8 Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 2/24 (8%) Frame = -2 Query: 167 GRCMQNNLGFGDPW--SPVYFFND 102 GRC + N GF PW SP F ND Sbjct: 227 GRCHKQNSGFEGPWTFSPTMFTND 250
>MIPO1_HUMAN (Q8TD10) Mirror-image polydactyly gene 1 protein| Length = 442 Score = 27.7 bits (60), Expect = 8.5 Identities = 17/46 (36%), Positives = 23/46 (50%) Frame = +2 Query: 53 ESLWATVNKNYNVMDHRH*KNTLETMGPQNLSCSACICQTSSKKNR 190 ES++ T K YNVM+HRH E M P CQ +S ++ Sbjct: 74 ESVYCTTEK-YNVMEHRHNDMHYECMTP---------CQVTSDSDK 109 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,393,565 Number of Sequences: 219361 Number of extensions: 628739 Number of successful extensions: 1360 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1348 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1360 length of database: 80,573,946 effective HSP length: 46 effective length of database: 70,483,340 effective search space used: 1691600160 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)