ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl39e01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 137 3e-29
2gb|AC120505.7| Oryza sativa chromosome 3 BAC OSJNBa0066H15 genom... 137 3e-29
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 137 3e-29
4dbj|AK101339.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 3e-29
5dbj|AB057787.1| Oryza sativa OsCR4 gene, complete cds 137 3e-29
6ref|XM_468998.1| Oryza sativa (japonica cultivar-group), mRNA 113 4e-22
7gb|AY110360.1| Zea mays CL2011_1 mRNA sequence 109 7e-21
8gb|U67422.1|ZMU67422 Zea mays CRINKLY4 precursor (cr4) mRNA, com... 109 7e-21
9gb|AY484589.1| Musa acuminata clone MuH9, genomic sequence 52 0.001
10gb|AC010623.10| Homo sapiens chromosome 5 clone CTD-2093G19, com... 44 0.32
11gb|AC124427.5| Mus musculus BAC clone RP24-232N5 from chromosome... 42 1.3
12ref|NM_112562.3| Arabidopsis thaliana unknown protein AT3G16860 ... 40 5.1
13emb|AJ781197.1| Influenza B virus (B/Hong Kong/330/01) partial P... 40 5.1
14emb|AJ781196.1| Influenza B virus (B/Trieste/28/02) partial PB2 ... 40 5.1
15emb|AJ781192.1| Influenza B virus (B/Sichuan/379/99) partial PB2... 40 5.1
16emb|AL138781.13| Human DNA sequence from clone RP11-83N9 on chro... 40 5.1
17emb|AL049861.18|HSBK21C21 Human DNA sequence from clone CTA-21C2... 40 5.1
18gb|AC161258.2| Mus musculus BAC clone RP23-457H24 from chromosom... 40 5.1
19gb|AC104819.4| Homo sapiens BAC clone RP11-731D1 from 4, complet... 40 5.1
20dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
21emb|BX823830.1|CNS0A7F9 Arabidopsis thaliana Full-length cDNA Co... 40 5.1
22gb|AC068196.4| Homo sapiens BAC clone RP11-685J19 from 2, comple... 40 5.1
23dbj|AP004868.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
24dbj|AP007203.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
25gb|AY504607.1| Influenza B virus (B/Hong Kong/330/2001) basic po... 40 5.1
26gb|AY504615.1| Influenza B virus (B/Hong Kong/330/2001 egg adapt... 40 5.1
27dbj|AP001308.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 5.1
28emb|Y14424.1|ATSEB2 Arabidopsis thaliana mRNA for hypothetical p... 40 5.1
29emb|AL731706.14| Mouse DNA sequence from clone RP23-199B10 on ch... 40 5.1
30gb|AC102860.13| Mus musculus chromosome 3, clone RP24-511H12, co... 40 5.1 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  137 bits (69), Expect = 3e-29
 Identities = 123/141 (87%)
 Strand = Plus / Minus

                                                                            
Query: 240      ttttcagctgatcttggcatttcatcagaagttgtgctgcaagtacaggttcccctgtgg 299
                |||||| ||| ||||| ||||||||||||||||||||||||||||||||||  |||| ||
Sbjct: 24307141 ttttcaactgttcttgacatttcatcagaagttgtgctgcaagtacaggttttcctgcgg 24307082

                                                                            
Query: 300      agacgccggcccaatctcttcctccagtgaccgcagaccatctcctatgctgctcccgac 359
                 || ||||| | ||| ||||||||||| |||||||  ||||| |||||||||||||| ||
Sbjct: 24307081 tgaggccgggctaatttcttcctccagcgaccgcaatccatcacctatgctgctcccaac 24307022

                                     
Query: 360      attcctcccatctgtggttgt 380
                 ||||| ||||||||||||||
Sbjct: 24307021 gttccttccatctgtggttgt 24307001



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                           
Query: 108      aatctacaaagaaatgcctccagatgctaaaaatccttccagt 150
                ||||||||||||||||||||| | |||||||| | ||||||||
Sbjct: 24307331 aatctacaaagaaatgcctccggctgctaaaatttcttccagt 24307289
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>gb|AC120505.7| Oryza sativa chromosome 3 BAC OSJNBa0066H15 genomic sequence, complete
             sequence
          Length = 171664

 Score =  137 bits (69), Expect = 3e-29
 Identities = 123/141 (87%)
 Strand = Plus / Plus

                                                                         
Query: 240   ttttcagctgatcttggcatttcatcagaagttgtgctgcaagtacaggttcccctgtgg 299
             |||||| ||| ||||| ||||||||||||||||||||||||||||||||||  |||| ||
Sbjct: 73483 ttttcaactgttcttgacatttcatcagaagttgtgctgcaagtacaggttttcctgcgg 73542

                                                                         
Query: 300   agacgccggcccaatctcttcctccagtgaccgcagaccatctcctatgctgctcccgac 359
              || ||||| | ||| ||||||||||| |||||||  ||||| |||||||||||||| ||
Sbjct: 73543 tgaggccgggctaatttcttcctccagcgaccgcaatccatcacctatgctgctcccaac 73602

                                  
Query: 360   attcctcccatctgtggttgt 380
              ||||| ||||||||||||||
Sbjct: 73603 gttccttccatctgtggttgt 73623



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                        
Query: 108   aatctacaaagaaatgcctccagatgctaaaaatccttccagt 150
             ||||||||||||||||||||| | |||||||| | ||||||||
Sbjct: 73293 aatctacaaagaaatgcctccggctgctaaaatttcttccagt 73335
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  137 bits (69), Expect = 3e-29
 Identities = 123/141 (87%)
 Strand = Plus / Minus

                                                                            
Query: 240      ttttcagctgatcttggcatttcatcagaagttgtgctgcaagtacaggttcccctgtgg 299
                |||||| ||| ||||| ||||||||||||||||||||||||||||||||||  |||| ||
Sbjct: 24224610 ttttcaactgttcttgacatttcatcagaagttgtgctgcaagtacaggttttcctgcgg 24224551

                                                                            
Query: 300      agacgccggcccaatctcttcctccagtgaccgcagaccatctcctatgctgctcccgac 359
                 || ||||| | ||| ||||||||||| |||||||  ||||| |||||||||||||| ||
Sbjct: 24224550 tgaggccgggctaatttcttcctccagcgaccgcaatccatcacctatgctgctcccaac 24224491

                                     
Query: 360      attcctcccatctgtggttgt 380
                 ||||| ||||||||||||||
Sbjct: 24224490 gttccttccatctgtggttgt 24224470



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                           
Query: 108      aatctacaaagaaatgcctccagatgctaaaaatccttccagt 150
                ||||||||||||||||||||| | |||||||| | ||||||||
Sbjct: 24224800 aatctacaaagaaatgcctccggctgctaaaatttcttccagt 24224758
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>dbj|AK101339.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034J17, full
            insert sequence
          Length = 3772

 Score =  137 bits (69), Expect = 3e-29
 Identities = 123/141 (87%)
 Strand = Plus / Minus

                                                                        
Query: 240  ttttcagctgatcttggcatttcatcagaagttgtgctgcaagtacaggttcccctgtgg 299
            |||||| ||| ||||| ||||||||||||||||||||||||||||||||||  |||| ||
Sbjct: 3406 ttttcaactgttcttgacatttcatcagaagttgtgctgcaagtacaggttttcctgcgg 3347

                                                                        
Query: 300  agacgccggcccaatctcttcctccagtgaccgcagaccatctcctatgctgctcccgac 359
             || ||||| | ||| ||||||||||| |||||||  ||||| |||||||||||||| ||
Sbjct: 3346 tgaggccgggctaatttcttcctccagcgaccgcaatccatcacctatgctgctcccaac 3287

                                 
Query: 360  attcctcccatctgtggttgt 380
             ||||| ||||||||||||||
Sbjct: 3286 gttccttccatctgtggttgt 3266



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                       
Query: 108  aatctacaaagaaatgcctccagatgctaaaaatccttccagt 150
            ||||||||||||||||||||| | |||||||| | ||||||||
Sbjct: 3596 aatctacaaagaaatgcctccggctgctaaaatttcttccagt 3554
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>dbj|AB057787.1| Oryza sativa OsCR4 gene, complete cds
          Length = 3859

 Score =  137 bits (69), Expect = 3e-29
 Identities = 123/141 (87%)
 Strand = Plus / Minus

                                                                        
Query: 240  ttttcagctgatcttggcatttcatcagaagttgtgctgcaagtacaggttcccctgtgg 299
            |||||| ||| ||||| ||||||||||||||||||||||||||||||||||  |||| ||
Sbjct: 3534 ttttcaactgttcttgacatttcatcagaagttgtgctgcaagtacaggttttcctgcgg 3475

                                                                        
Query: 300  agacgccggcccaatctcttcctccagtgaccgcagaccatctcctatgctgctcccgac 359
             || ||||| | ||| ||||||||||| |||||||  ||||| |||||||||||||| ||
Sbjct: 3474 tgaggccgggctaatttcttcctccagcgaccgcaatccatcacctatgctgctcccaac 3415

                                 
Query: 360  attcctcccatctgtggttgt 380
             ||||| ||||||||||||||
Sbjct: 3414 gttccttccatctgtggttgt 3394



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                       
Query: 108  aatctacaaagaaatgcctccagatgctaaaaatccttccagt 150
            ||||||||||||||||||||| | |||||||| | ||||||||
Sbjct: 3724 aatctacaaagaaatgcctccggctgctaaaatttcttccagt 3682
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>ref|XM_468998.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2706

 Score =  113 bits (57), Expect = 4e-22
 Identities = 102/117 (87%)
 Strand = Plus / Minus

                                                                        
Query: 264  tcagaagttgtgctgcaagtacaggttcccctgtggagacgccggcccaatctcttcctc 323
            |||||||||||||||||||||||||||  |||| || || ||||| | ||| ||||||||
Sbjct: 2706 tcagaagttgtgctgcaagtacaggttttcctgcggtgaggccgggctaatttcttcctc 2647

                                                                     
Query: 324  cagtgaccgcagaccatctcctatgctgctcccgacattcctcccatctgtggttgt 380
            ||| |||||||  ||||| |||||||||||||| || ||||| ||||||||||||||
Sbjct: 2646 cagcgaccgcaatccatcacctatgctgctcccaacgttccttccatctgtggttgt 2590
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>gb|AY110360.1| Zea mays CL2011_1 mRNA sequence
          Length = 3324

 Score =  109 bits (55), Expect = 7e-21
 Identities = 103/119 (86%)
 Strand = Plus / Minus

                                                                        
Query: 258  atttcatcagaagttgtgctgcaagtacaggttcccctgtggagacgccggcccaatctc 317
            ||||| |||||||||||||||||||||||||||| | ||||| || || ||  | || ||
Sbjct: 2868 atttcttcagaagttgtgctgcaagtacaggttctcttgtggtgaagctggagcgatttc 2809

                                                                       
Query: 318  ttcctccagtgaccgcagaccatctcctatgctgctcccgacattcctcccatctgtgg 376
            |||||||||||||||||| || || ||||||||||||||||| ||||| || |||||||
Sbjct: 2808 ttcctccagtgaccgcagtccgtcacctatgctgctcccgacgttcctgccgtctgtgg 2750
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>gb|U67422.1|ZMU67422 Zea mays CRINKLY4 precursor (cr4) mRNA, complete cds
          Length = 3346

 Score =  109 bits (55), Expect = 7e-21
 Identities = 103/119 (86%)
 Strand = Plus / Minus

                                                                        
Query: 258  atttcatcagaagttgtgctgcaagtacaggttcccctgtggagacgccggcccaatctc 317
            ||||| |||||||||||||||||||||||||||| | ||||| || || ||  | || ||
Sbjct: 2868 atttcttcagaagttgtgctgcaagtacaggttctcttgtggtgaagctggagcgatttc 2809

                                                                       
Query: 318  ttcctccagtgaccgcagaccatctcctatgctgctcccgacattcctcccatctgtgg 376
            |||||||||||||||||| || || ||||||||||||||||| ||||| || |||||||
Sbjct: 2808 ttcctccagtgaccgcagtccgtcacctatgctgctcccgacgttcctgccgtctgtgg 2750
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>gb|AY484589.1| Musa acuminata clone MuH9, genomic sequence
          Length = 82723

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                         
Query: 264   tcagaagttgtgctgcaagtacaggttcccctgtggagacgccggcccaatctcttcctc 323
             |||||||||||| |||||| |||| ||| ||||||| || || || || |||||||||||
Sbjct: 38972 tcagaagttgtgttgcaagaacagattctcctgtggggatgctggtccgatctcttcctc 39031

               
Query: 324   ca 325
             ||
Sbjct: 39032 ca 39033
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>gb|AC010623.10| Homo sapiens chromosome 5 clone CTD-2093G19, complete sequence
          Length = 122505

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 257   catttcatcagaagttgtgctg 278
             ||||||||||||||||||||||
Sbjct: 43055 catttcatcagaagttgtgctg 43076
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>gb|AC124427.5| Mus musculus BAC clone RP24-232N5 from chromosome 8, complete sequence
          Length = 205525

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 309    cccaatctcttcctccagtga 329
              |||||||||||||||||||||
Sbjct: 123611 cccaatctcttcctccagtga 123631
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>ref|NM_112562.3| Arabidopsis thaliana unknown protein AT3G16860 mRNA, complete cds
          Length = 2361

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 266  agaagttgtgctgcaagtac 285
            ||||||||||||||||||||
Sbjct: 1475 agaagttgtgctgcaagtac 1456
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>emb|AJ781197.1| Influenza B virus (B/Hong Kong/330/01) partial PB2 gene for
           polymerase 2, genomic RNA, isolate B/Hong Kong/330/01
          Length = 2319

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 114 caaagaaatgcctccagatg 133
           ||||||||||||||||||||
Sbjct: 468 caaagaaatgcctccagatg 487
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>emb|AJ781196.1| Influenza B virus (B/Trieste/28/02) partial PB2 gene for polymerase
           2, genomic RNA, isolate B/Trieste/28/02
          Length = 2298

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 114 caaagaaatgcctccagatg 133
           ||||||||||||||||||||
Sbjct: 447 caaagaaatgcctccagatg 466
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>emb|AJ781192.1| Influenza B virus (B/Sichuan/379/99) partial PB2 gene for
           polymerase 2, genomic RNA, isolate B/Sichuan/379/99
          Length = 2319

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 114 caaagaaatgcctccagatg 133
           ||||||||||||||||||||
Sbjct: 468 caaagaaatgcctccagatg 487
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>emb|AL138781.13| Human DNA sequence from clone RP11-83N9 on chromosome 9p34.1-35.1
             Contains a novel gene (LOC90120), the LHX3 gene for LIM
             homeobox protein 3, the gene for a novel protein
             (DKFZp762A2013) similar to quiescin proteins and seven CpG
             islands, complete sequence
          Length = 154918

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 359   cattcctcccatctgtggtt 378
             ||||||||||||||||||||
Sbjct: 82665 cattcctcccatctgtggtt 82684
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>emb|AL049861.18|HSBK21C21 Human DNA sequence from clone CTA-21C21 on chromosome 1p22.2-31.1
             Contains STSs and GSSs, complete sequence
          Length = 143163

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 64    attccacttataaatacaag 83
             ||||||||||||||||||||
Sbjct: 65126 attccacttataaatacaag 65107
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>gb|AC161258.2| Mus musculus BAC clone RP23-457H24 from chromosome 17, complete sequence
          Length = 201842

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 112    tacaaagaaatgcctccaga 131
              ||||||||||||||||||||
Sbjct: 100627 tacaaagaaatgcctccaga 100608
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>gb|AC104819.4| Homo sapiens BAC clone RP11-731D1 from 4, complete sequence
          Length = 129203

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 188   ccaaagcaacaggtcacaaa 207
             ||||||||||||||||||||
Sbjct: 93753 ccaaagcaacaggtcacaaa 93772
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 105      atcaatctacaaagaaatgc 124
                ||||||||||||||||||||
Sbjct: 26177782 atcaatctacaaagaaatgc 26177763
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>emb|BX823830.1|CNS0A7F9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS80ZD01 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2270

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 266  agaagttgtgctgcaagtac 285
            ||||||||||||||||||||
Sbjct: 1474 agaagttgtgctgcaagtac 1455
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>gb|AC068196.4| Homo sapiens BAC clone RP11-685J19 from 2, complete sequence
          Length = 162566

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 115    aaagaaatgcctccagatgctaaaaatc 142
              |||||||||||||| |||| ||||||||
Sbjct: 115825 aaagaaatgcctcctgatgttaaaaatc 115852
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>dbj|AP004868.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0048B08
          Length = 146874

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 105   atcaatctacaaagaaatgc 124
             ||||||||||||||||||||
Sbjct: 74609 atcaatctacaaagaaatgc 74590
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>dbj|AP007203.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
           BAC clone:OSJNBb0012J10
          Length = 132375

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 105 atcaatctacaaagaaatgc 124
           ||||||||||||||||||||
Sbjct: 623 atcaatctacaaagaaatgc 604
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>gb|AY504607.1| Influenza B virus (B/Hong Kong/330/2001) basic polymerase subunit 2
           (PB2) gene, complete cds
          Length = 2396

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 114 caaagaaatgcctccagatg 133
           ||||||||||||||||||||
Sbjct: 482 caaagaaatgcctccagatg 501
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>gb|AY504615.1| Influenza B virus (B/Hong Kong/330/2001 egg adapted) basic
           polymerase subunit 2 (PB2) gene, complete cds
          Length = 2396

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 114 caaagaaatgcctccagatg 133
           ||||||||||||||||||||
Sbjct: 482 caaagaaatgcctccagatg 501
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>dbj|AP001308.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MUH15
          Length = 11291

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 266  agaagttgtgctgcaagtac 285
            ||||||||||||||||||||
Sbjct: 3352 agaagttgtgctgcaagtac 3371
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>emb|Y14424.1|ATSEB2 Arabidopsis thaliana mRNA for hypothetical protein SEB2, partial
          Length = 1244

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 266 agaagttgtgctgcaagtac 285
           ||||||||||||||||||||
Sbjct: 382 agaagttgtgctgcaagtac 363
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>emb|AL731706.14| Mouse DNA sequence from clone RP23-199B10 on chromosome 2, complete
              sequence
          Length = 195301

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 51     atcaactgtggccattccac 70
              ||||||||||||||||||||
Sbjct: 146227 atcaactgtggccattccac 146208
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>gb|AC102860.13| Mus musculus chromosome 3, clone RP24-511H12, complete sequence
          Length = 202315

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 266   agaagttgtgctgcaagtacaggt 289
             ||||||||||||| ||||||||||
Sbjct: 72030 agaagttgtgctgaaagtacaggt 72053


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,255,234
Number of Sequences: 3902068
Number of extensions: 3255234
Number of successful extensions: 59916
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59806
Number of HSP's gapped (non-prelim): 108
length of query: 380
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 358
effective length of database: 17,147,199,772
effective search space: 6138697518376
effective search space used: 6138697518376
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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