>JHD3C_MOUSE (Q8VCD7) JmjC domain-containing histone demethylation protein 3C|
           (EC 1.14.11.-) (Jumonji domain-containing protein 2C)
          Length = 1054

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -2

Query: 373 LFKSHLFHVEFLRECLDLDDEVRETASWTQGMIN 272
           L K  +   E L E L +D+EV ET SW + +I+
Sbjct: 584 LVKQQVASDEELPEVLSIDEEVEETESWAKPLIH 617

>YAAG_BACSU (P37530) Hypothetical protein yaaG|
          Length = 207

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 13/68 (19%)
 Frame = +2

Query: 251 RLRNYRLVYHPLGP*RRLPHFIIQIEA-------------LPQELNMEEVALEQILRDWP 391
           +L  Y+ +YH L      P+FII I+A              P E  +E   LEQ++ D+ 
Sbjct: 104 QLEKYKKIYHLLTDDLPKPNFIIYIKASLPTLLHRIEKRGRPFEKKIETSYLEQLISDYE 163

Query: 392 KCVRKIHQ 415
             ++++ +
Sbjct: 164 VAIKQLQE 171


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,816,446
Number of Sequences: 219361
Number of extensions: 1269005
Number of successful extensions: 3236
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3236
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)