ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl39c12 |
|---|---|
| Clone Library Name | barley_pub |
>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)| (LOX-100) (LOX2:Hv:1) Length = 936 Score = 173 bits (439), Expect = 8e-44 Identities = 84/89 (94%), Positives = 84/89 (94%), Gaps = 5/89 (5%) Frame = -1 Query: 396 DEEYMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLL 217 DEEYMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLL Sbjct: 848 DEEYMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLL 907 Query: 216 RPS-----DGDPTDEKMVMEMGIPNSISI 145 RPS DGDPTDEKMVMEMGIPNSISI Sbjct: 908 RPSDGDPTDGDPTDEKMVMEMGIPNSISI 936
>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:2) Length = 932 Score = 129 bits (324), Expect = 2e-30 Identities = 57/84 (67%), Positives = 70/84 (83%) Frame = -1 Query: 396 DEEYMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLL 217 DEEYMGTH+EPAW +DG +++AF+ F++ R I EQV+EWN D R+NRHGAG+VPYVLL Sbjct: 849 DEEYMGTHQEPAWQRDGEVDKAFQVFQKKMRDIAEQVEEWNKDDSRRNRHGAGVVPYVLL 908 Query: 216 RPSDGDPTDEKMVMEMGIPNSISI 145 RP +G+P D K VMEMGIPNSISI Sbjct: 909 RPLNGNPMDAKTVMEMGIPNSISI 932
>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:3) Length = 896 Score = 77.0 bits (188), Expect = 1e-14 Identities = 40/84 (47%), Positives = 52/84 (61%) Frame = -1 Query: 396 DEEYMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLL 217 DEEYMG + EPAW + ++ AFE+F ++ +D NN+P+ KNR GAG+VPY LL Sbjct: 818 DEEYMGEYAEPAWLAEPMVKAAFEKFSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYELL 877 Query: 216 RPSDGDPTDEKMVMEMGIPNSISI 145 + P E V GIPNSISI Sbjct: 878 K-----PFSEPGVTGRGIPNSISI 896
>LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13.11.12)| Length = 896 Score = 69.7 bits (169), Expect = 2e-12 Identities = 39/84 (46%), Positives = 50/84 (59%) Frame = -1 Query: 396 DEEYMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLL 217 DEEY+G +E +W + VIN AFE FK + + +DE N + KNR GAG+V Y LL Sbjct: 818 DEEYIGEQQEASWANEPVINAAFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELL 877 Query: 216 RPSDGDPTDEKMVMEMGIPNSISI 145 + PT E V MG+P SISI Sbjct: 878 K-----PTSEHGVTGMGVPYSISI 896
>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)| Length = 899 Score = 69.3 bits (168), Expect = 2e-12 Identities = 34/84 (40%), Positives = 48/84 (57%) Frame = -1 Query: 396 DEEYMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLL 217 DEEY+G + AWT D A EF R+ E+++ N DP R+NR GAG++PY L+ Sbjct: 821 DEEYLGERPDEAWTADPAALAAAREFAADVRRAEEEIERRNADPSRRNRCGAGVLPYELM 880 Query: 216 RPSDGDPTDEKMVMEMGIPNSISI 145 PS G + G+PNS++I Sbjct: 881 APSSGPG-----ITCRGVPNSVTI 899
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 64.3 bits (155), Expect = 7e-11 Identities = 35/86 (40%), Positives = 47/86 (54%), Gaps = 2/86 (2%) Frame = -1 Query: 396 DEEYMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLL 217 DE Y+G + P WT D AF+ F I ++ + N + KNR+G +PY+LL Sbjct: 792 DEVYLGQRDTPEWTSDAKALDAFKRFGSRLVDIENRIKDMNGNSALKNRNGPVKMPYMLL 851 Query: 216 RPSDGDPTDEK--MVMEMGIPNSISI 145 P+ D T EK + MGIPNSISI Sbjct: 852 YPNTSDVTKEKGQGLTAMGIPNSISI 877
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 63.9 bits (154), Expect = 9e-11 Identities = 36/85 (42%), Positives = 44/85 (51%), Gaps = 1/85 (1%) Frame = -1 Query: 396 DEEYMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLL 217 DE Y+G + P WT D +AF+ F +I +V N DP RKNR G PY LL Sbjct: 786 DEVYLGQRDTPEWTSDAKALEAFKRFGARLTEIESRVVAMNKDPHRKNRVGPTNFPYTLL 845 Query: 216 RPSDGD-PTDEKMVMEMGIPNSISI 145 P+ D D + GIPNSISI Sbjct: 846 YPNTSDLKGDAAGLSARGIPNSISI 870
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 63.2 bits (152), Expect = 1e-10 Identities = 35/85 (41%), Positives = 45/85 (52%), Gaps = 1/85 (1%) Frame = -1 Query: 396 DEEYMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLL 217 DE Y+G + PAWT D +AF F + +I +V N D KNR+G PY+LL Sbjct: 782 DEVYLGQRDTPAWTSDARALEAFRRFSDRLVEIEGKVVGMNGDAGLKNRNGPAEFPYMLL 841 Query: 216 RPSDGDPTDEKM-VMEMGIPNSISI 145 P+ D T + GIPNSISI Sbjct: 842 YPNTSDVTGAAAGITAKGIPNSISI 866
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 62.0 bits (149), Expect = 3e-10 Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 1/85 (1%) Frame = -1 Query: 396 DEEYMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLL 217 DE Y+G + P WT D + F+ F + +I +V N+DP+ KNR+G PY+LL Sbjct: 778 DELYLGQRDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLL 837 Query: 216 RPSDGDPTDEKM-VMEMGIPNSISI 145 P+ D + GIPNSISI Sbjct: 838 YPNTSDHKGAAAGLTAKGIPNSISI 862
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 62.0 bits (149), Expect = 3e-10 Identities = 36/85 (42%), Positives = 48/85 (56%), Gaps = 1/85 (1%) Frame = -1 Query: 396 DEEYMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPD-RKNRHGAGMVPYVL 220 DE Y+G + P WT D QAF++F ++I E++ NNDP + NR G +PY L Sbjct: 760 DEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTL 819 Query: 219 LRPSDGDPTDEKMVMEMGIPNSISI 145 L PS E+ + GIPNSISI Sbjct: 820 LYPS-----SEEGLTFRGIPNSISI 839
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 61.6 bits (148), Expect = 4e-10 Identities = 34/84 (40%), Positives = 46/84 (54%) Frame = -1 Query: 396 DEEYMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLL 217 DE Y+G + W + +AFE+F E ++I + +DE N+D KNR G +PY LL Sbjct: 781 DEVYLGQRDSKEWAAEKEALEAFEKFGEKVKEIEKNIDERNDDETLKNRTGLVKMPYTLL 840 Query: 216 RPSDGDPTDEKMVMEMGIPNSISI 145 PS E V GIPNS+SI Sbjct: 841 FPS-----SEGGVTGRGIPNSVSI 859
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 61.6 bits (148), Expect = 4e-10 Identities = 34/84 (40%), Positives = 44/84 (52%) Frame = -1 Query: 396 DEEYMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLL 217 DE Y+G + P WT D QAF++F ++I E++ NND NR G +PY LL Sbjct: 788 DEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLARKNNDQSLSNRLGPVQLPYTLL 847 Query: 216 RPSDGDPTDEKMVMEMGIPNSISI 145 P+ T GIPNSISI Sbjct: 848 HPNSEGLTCR------GIPNSISI 865
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 61.2 bits (147), Expect = 6e-10 Identities = 34/84 (40%), Positives = 45/84 (53%) Frame = -1 Query: 396 DEEYMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLL 217 DE Y+G E P WT D QAF++F +I ++ NNDP +R G +PY LL Sbjct: 786 DEVYLGQRENPHWTSDSKALQAFQKFGNKLAEIEAKLTNKNNDPSLYHRVGPVQLPYTLL 845 Query: 216 RPSDGDPTDEKMVMEMGIPNSISI 145 PS ++ + GIPNSISI Sbjct: 846 HPS-----SKEGLTFRGIPNSISI 864
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 61.2 bits (147), Expect = 6e-10 Identities = 33/84 (39%), Positives = 48/84 (57%) Frame = -1 Query: 396 DEEYMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLL 217 DE Y+G + P WT D +AF++F +I +++ + NND +NRHG +PY LL Sbjct: 783 DELYLGERDNPNWTSDKRALEAFKKFGNKLAEIEKKLTQRNNDEKLRNRHGPVEMPYTLL 842 Query: 216 RPSDGDPTDEKMVMEMGIPNSISI 145 PS ++ + GIPNSISI Sbjct: 843 YPS-----SKEGLTFRGIPNSISI 861
>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)| Length = 924 Score = 60.8 bits (146), Expect = 7e-10 Identities = 32/84 (38%), Positives = 45/84 (53%) Frame = -1 Query: 396 DEEYMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLL 217 DEEY+G + W D + A++ F ++I +D N D KNR GAG++PY L+ Sbjct: 846 DEEYLGGEQTRPWNSDAAVQAAYDGFAARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLM 905 Query: 216 RPSDGDPTDEKMVMEMGIPNSISI 145 + P + V MGIPNS SI Sbjct: 906 K-----PFSDSGVTGMGIPNSTSI 924
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 60.5 bits (145), Expect = 1e-09 Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 1/85 (1%) Frame = -1 Query: 396 DEEYMGTH-EEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVL 220 DE+Y+G E WT D V +AF+ F + +I E++ + NND +NR+G +PY L Sbjct: 787 DEQYLGERIEGDDWTTDSVPKEAFKRFGKKLAEIEEKLTQRNNDESLRNRYGPVKMPYTL 846 Query: 219 LRPSDGDPTDEKMVMEMGIPNSISI 145 L PS E+ + GIPNSISI Sbjct: 847 LYPS-----SEEGLTCRGIPNSISI 866
>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC| 1.13.11.12) Length = 941 Score = 59.7 bits (143), Expect = 2e-09 Identities = 34/85 (40%), Positives = 45/85 (52%), Gaps = 1/85 (1%) Frame = -1 Query: 396 DEEYMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLL 217 DEEY+G + W D + A+ F ++I +D N D KNR GAG++PY L+ Sbjct: 863 DEEYLGGEQTRPWNSDAAVQAAYAGFTARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLM 922 Query: 216 RP-SDGDPTDEKMVMEMGIPNSISI 145 +P SD T MGIPNS SI Sbjct: 923 KPFSDAGVTG------MGIPNSTSI 941
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 58.9 bits (141), Expect = 3e-09 Identities = 33/84 (39%), Positives = 45/84 (53%) Frame = -1 Query: 396 DEEYMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLL 217 DE Y+G + P WT D +AF+ F +I ++ E NND +NR G +PY LL Sbjct: 779 DEVYLGERDNPNWTSDTRALEAFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQMPYTLL 838 Query: 216 RPSDGDPTDEKMVMEMGIPNSISI 145 PS ++ + GIPNSISI Sbjct: 839 LPS-----SKEGLTFRGIPNSISI 857
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 58.2 bits (139), Expect = 5e-09 Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 1/85 (1%) Frame = -1 Query: 396 DEEYMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLL 217 DE Y+G + P WT D +AF+ F +I +V N DP KNR G PY L+ Sbjct: 779 DEIYLGQRDTPEWTSDPKALEAFKRFSRQLVEIESKVLNMNKDPLLKNRVGPANFPYTLM 838 Query: 216 RPSDGDPTD-EKMVMEMGIPNSISI 145 P+ D + + GIPNSISI Sbjct: 839 FPNTSDNKGAAEGITARGIPNSISI 863
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 57.0 bits (136), Expect = 1e-08 Identities = 33/84 (39%), Positives = 44/84 (52%) Frame = -1 Query: 396 DEEYMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLL 217 DE Y+G E P WT D +AF+ F I +++ N+DP +NR G +PY LL Sbjct: 786 DEIYLGERETPNWTTDKKALEAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLL 845 Query: 216 RPSDGDPTDEKMVMEMGIPNSISI 145 S E+ + GIPNSISI Sbjct: 846 HRS-----SEEGLTFKGIPNSISI 864
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 56.6 bits (135), Expect = 1e-08 Identities = 30/84 (35%), Positives = 48/84 (57%) Frame = -1 Query: 396 DEEYMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLL 217 DE Y+G + P WT + QAF+ F + ++I E++ N D +NR+G +PY +L Sbjct: 783 DEVYLGQRDNPNWTNNIKALQAFKRFGQKLKEIEEKIMGRNKDSSLRNRNGPVKMPYTVL 842 Query: 216 RPSDGDPTDEKMVMEMGIPNSISI 145 P+ +++ + GIPNSISI Sbjct: 843 LPT----CEDEGLTFRGIPNSISI 862
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 56.2 bits (134), Expect = 2e-08 Identities = 34/84 (40%), Positives = 42/84 (50%) Frame = -1 Query: 396 DEEYMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLL 217 DE Y+G E P WTKD AF+ F + I +Q+ + N D NR G PY LL Sbjct: 783 DEIYLGQRESPEWTKDKEPLAAFDRFGKKLTDIEKQIIQRNGDNILTNRSGPVNAPYTLL 842 Query: 216 RPSDGDPTDEKMVMEMGIPNSISI 145 PT E + GIPNS+SI Sbjct: 843 -----FPTSEGGLTGKGIPNSVSI 861
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 54.7 bits (130), Expect = 5e-08 Identities = 35/87 (40%), Positives = 43/87 (49%), Gaps = 3/87 (3%) Frame = -1 Query: 396 DEEYMGTHEEPA---WTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPY 226 DEEY+G + WT D A F R+ E ++ N D RKNR GAG++PY Sbjct: 837 DEEYLGEGRDEGGVPWTADEAAVAAHGMFAADVRRAEETIERRNADHGRKNRCGAGVLPY 896 Query: 225 VLLRPSDGDPTDEKMVMEMGIPNSISI 145 LL PS V G+PNSISI Sbjct: 897 ELLAPS-----SPPGVTCRGVPNSISI 918
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 54.7 bits (130), Expect = 5e-08 Identities = 34/84 (40%), Positives = 41/84 (48%) Frame = -1 Query: 396 DEEYMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLL 217 DE Y+G E P WTKD AFE F I +Q+ + N + NR G PY LL Sbjct: 782 DEIYLGQRESPEWTKDKEPLAAFERFGNKLTDIEKQIMQRNGNNILTNRTGPVNAPYTLL 841 Query: 216 RPSDGDPTDEKMVMEMGIPNSISI 145 PT E + GIPNS+SI Sbjct: 842 -----FPTSEGGLTGKGIPNSVSI 860
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 52.8 bits (125), Expect = 2e-07 Identities = 33/84 (39%), Positives = 42/84 (50%) Frame = -1 Query: 396 DEEYMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLL 217 DE Y+G + WTKD AFE F + I ++ N+ KNR G VPY LL Sbjct: 781 DEVYLGQRDSIEWTKDKEPLVAFERFGKMLSDIENRIMIMNSHKSWKNRSGPVNVPYTLL 840 Query: 216 RPSDGDPTDEKMVMEMGIPNSISI 145 PT E+ + GIPNS+SI Sbjct: 841 -----FPTSEEGLTGKGIPNSVSI 859
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 52.0 bits (123), Expect = 3e-07 Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 1/85 (1%) Frame = -1 Query: 396 DEEYMGTHEE-PAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVL 220 DE Y+G + WT D +AF+ F + +I +++ E N D +NR+G +PY L Sbjct: 774 DEFYLGQRDGGDYWTSDAGPLEAFKRFGKKLEEIEKKLIEKNKDETLRNRYGPAKMPYTL 833 Query: 219 LRPSDGDPTDEKMVMEMGIPNSISI 145 L PS E+ + GIPNSISI Sbjct: 834 LYPS-----SEEGLTFRGIPNSISI 853
>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)| Length = 741 Score = 42.7 bits (99), Expect = 2e-04 Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Frame = -1 Query: 396 DEEYMGTHEE-PAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVL 220 DE Y+G + WT D +AF+ F + +I +++ + NND +NR G +PY L Sbjct: 668 DEIYLGERDGGDHWTSDAGPLEAFKRFGKKLAEIEKKLVQKNNDETLRNRTGPAKMPYTL 727 Query: 219 LRPS 208 L PS Sbjct: 728 LYPS 731
>UREE_RHOS4 (Q3J156) Urease accessory protein ureE| Length = 182 Score = 31.6 bits (70), Expect = 0.48 Identities = 19/53 (35%), Positives = 25/53 (47%) Frame = -3 Query: 298 RGAGG*VEQRPRPEKPTRRRHGAVCAAQAVGR*SHGREDGDGDGHPQQHLHLS 140 RG G +E R P +P GA + +G HG G G HP H+H+S Sbjct: 120 RGLGLTLEPRTEPFRP---EGGAYGHGRTLGH-DHGPAQGHGHDHPHVHVHIS 168
>MUTS_STRT2 (Q5M6I1) DNA mismatch repair protein mutS| Length = 852 Score = 30.4 bits (67), Expect = 1.1 Identities = 12/41 (29%), Positives = 22/41 (53%) Frame = -1 Query: 357 TKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGM 235 T+ G+I F+E + RK++ + W D + K R +G+ Sbjct: 407 TEGGIIRDGFDETLDKYRKVMSEGTSWIADIEAKEREASGI 447
>MUTS_STRT1 (Q5M1Z0) DNA mismatch repair protein mutS| Length = 852 Score = 30.4 bits (67), Expect = 1.1 Identities = 12/41 (29%), Positives = 22/41 (53%) Frame = -1 Query: 357 TKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGM 235 T+ G+I F+E + RK++ + W D + K R +G+ Sbjct: 407 TEGGIIRDGFDETLDKYRKVMSEGTSWIADIEAKEREASGI 447
>PURA_STAAR (Q6GKS8) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 427 Score = 29.6 bits (65), Expect = 1.8 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -1 Query: 372 EEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNN 271 E P WT+D + EE E+ RK +E++ E N Sbjct: 372 ELPGWTEDVTSVRTLEELPENARKYLERISELCN 405
>PURA_STAAN (P99099) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 427 Score = 29.6 bits (65), Expect = 1.8 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -1 Query: 372 EEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNN 271 E P WT+D + EE E+ RK +E++ E N Sbjct: 372 ELPGWTEDVTSVRTLEELPENARKYLERISELCN 405
>PURA_STAAM (P65884) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 427 Score = 29.6 bits (65), Expect = 1.8 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -1 Query: 372 EEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNN 271 E P WT+D + EE E+ RK +E++ E N Sbjct: 372 ELPGWTEDVTSVRTLEELPENARKYLERISELCN 405
>MUTS_NEIMB (Q9JX94) DNA mismatch repair protein mutS| Length = 864 Score = 29.6 bits (65), Expect = 1.8 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Frame = -1 Query: 372 EEPAWTKDG-VINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGM 235 E W KDG VIN F + R+I DE+ D + K R G+ Sbjct: 408 EPSVWLKDGNVINHGFHPELDELRRIQNHGDEFLLDLEAKERERTGL 454
>MUTS_NEIMA (Q9JWT7) DNA mismatch repair protein mutS| Length = 864 Score = 29.6 bits (65), Expect = 1.8 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Frame = -1 Query: 372 EEPAWTKDG-VINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGM 235 E W KDG VIN F + R+I DE+ D + K R G+ Sbjct: 408 EPSVWLKDGNVINHGFHPELDELRRIQNHGDEFLLDLEAKERERTGL 454
>MUTS_NEIG1 (Q5F5J4) DNA mismatch repair protein mutS| Length = 864 Score = 29.6 bits (65), Expect = 1.8 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Frame = -1 Query: 372 EEPAWTKDG-VINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGM 235 E W KDG VIN F + R+I DE+ D + K R G+ Sbjct: 408 EPSVWLKDGNVINHGFHPELDELRRIQNHGDEFLLDLEAKERERTGL 454
>GLGC_CORDI (Q6NHY8) Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)| (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (ADPGlc PPase) Length = 427 Score = 29.6 bits (65), Expect = 1.8 Identities = 15/52 (28%), Positives = 28/52 (53%) Frame = -1 Query: 381 GTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPY 226 GT ++P+ T + N F ST +++ + E N+PD ++ G ++PY Sbjct: 208 GTPDDPSMTFASMGNYVF-----STDALIQALKEDENNPDSEHDMGGDIIPY 254
>PURA_STAAW (Q8NYX6) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 427 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -1 Query: 372 EEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNN 271 E P WT+D + EE E+ RK +E++ E N Sbjct: 372 ELPGWTEDVTNVRTLEELPENARKYLERISELCN 405
>PURA_STAAS (Q6GD73) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 427 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -1 Query: 372 EEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNN 271 E P WT+D + EE E+ RK +E++ E N Sbjct: 372 ELPGWTEDVTNVRTLEELPENARKYLERISELCN 405
>PURA_STAAC (Q5HJX8) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 427 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -1 Query: 372 EEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNN 271 E P WT+D + EE E+ RK +E++ E N Sbjct: 372 ELPGWTEDVTNVRTLEELPENARKYLERISELCN 405
>MCSP_RAT (Q64298) Sperm mitochondrial-associated cysteine-rich protein| Length = 145 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = +3 Query: 294 PRSSWCSP*TPQMPG*SPHPLSMPALRACPC 386 P+S C+P P P P + PA ACPC Sbjct: 43 PKSPCCTPKVCPCPTPCPCPATCPAACACPC 73
>CELR2_MOUSE (Q9R0M0) Cadherin EGF LAG seven-pass G-type receptor 2 precursor| (Flamingo 1) (mFmi1) Length = 2920 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = +2 Query: 230 GTMPAPCRFFRSGSLFHSSTCSTIFLVLSLNSSNAWLIT 346 G PCR SG S C+ + + ++SN WL T Sbjct: 31 GDQVGPCRSLGSGGRSSSGACAPVGWLCPASASNLWLYT 69
>PURA_BACHK (Q6HAG9) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 429 Score = 28.9 bits (63), Expect = 3.1 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = -1 Query: 372 EEPAWTKDGVINQAFEEFKESTRKIVEQVDE 280 E P WT+D ++ +E E+ RK VE+V E Sbjct: 372 ELPGWTEDITGVRSLDELPENARKYVERVSE 402
>PURA_BACCZ (Q630D5) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 429 Score = 28.9 bits (63), Expect = 3.1 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = -1 Query: 372 EEPAWTKDGVINQAFEEFKESTRKIVEQVDE 280 E P WT+D ++ +E E+ RK VE+V E Sbjct: 372 ELPGWTEDITGVRSLDELPENARKYVERVSE 402
>PURA_BACC1 (Q72WW1) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 429 Score = 28.9 bits (63), Expect = 3.1 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = -1 Query: 372 EEPAWTKDGVINQAFEEFKESTRKIVEQVDE 280 E P WT+D ++ +E E+ RK VE+V E Sbjct: 372 ELPGWTEDITGVRSLDELPENARKYVERVSE 402
>PURA_BACAN (Q81JI9) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 429 Score = 28.9 bits (63), Expect = 3.1 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = -1 Query: 372 EEPAWTKDGVINQAFEEFKESTRKIVEQVDE 280 E P WT+D ++ +E E+ RK VE+V E Sbjct: 372 ELPGWTEDITGVRSLDELPENARKYVERVSE 402
>ASPA_PROMM (Q7V5L6) Probable aspartoacylase (EC 3.5.1.15)| Length = 304 Score = 28.9 bits (63), Expect = 3.1 Identities = 9/22 (40%), Positives = 15/22 (68%) Frame = -1 Query: 288 VDEWNNDPDRKNRHGAGMVPYV 223 +D+W+ P+ N HG G+VP + Sbjct: 23 LDQWSQTPELINTHGVGVVPVI 44
>Y463_CHRVO (Q7P0V2) UPF0341 protein CV_0463| Length = 258 Score = 28.5 bits (62), Expect = 4.0 Identities = 16/35 (45%), Positives = 17/35 (48%) Frame = -3 Query: 265 RPEKPTRRRHGAVCAAQAVGR*SHGREDGDGDGHP 161 R E T +HGAV A G H RE G G G P Sbjct: 45 RLELLTTGKHGAVYAEFVEGAARHRREQGGGRGQP 79
>DIAP1_MOUSE (O08808) Protein diaphanous homolog 1 (Diaphanous-related formin-1)| (DRF1) (mDIA1) (p140mDIA) Length = 1255 Score = 28.1 bits (61), Expect = 5.3 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 2/44 (4%) Frame = +3 Query: 267 GRCSTHPPAPRSSWCSP*TPQMPG*S--PHPLSMPALRACPCTP 392 G C PP C P PQ+PG + P P +P + + P P Sbjct: 608 GTCIPPPPPLPGGACIPPPPQLPGSAAIPPPPPLPGVASIPPPP 651
>CAC2_YEAST (Q04199) Chromatin assembly factor 1 subunit p60 (CAF-1 60 kDa| subunit) Length = 468 Score = 28.1 bits (61), Expect = 5.3 Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 5/57 (8%) Frame = +2 Query: 236 MPAPCRFFRSGSLFHSSTCSTIFLVLSLNSSNAWLITPSFVH--AG---SSCVPMYS 391 +P P R+ LFH+ T + F S++ ++ PS V+ AG ++CV +Y+ Sbjct: 238 LPCPGDVLRTNYLFHNETLPSFFRRCSISPCGGLVVIPSGVYKVAGDEVANCVYVYT 294
>MCSP_MOUSE (P15265) Sperm mitochondrial-associated cysteine-rich protein| Length = 143 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 4/42 (9%) Frame = +3 Query: 273 CSTHPPA-PRSSWC---SP*TPQMPG*SPHPLSMPALRACPC 386 C PP P+S C SP P P P P P CPC Sbjct: 27 CPQKPPCCPKSPCCPPKSPCCPPKPCPCPPPCPCPCPATCPC 68
>CAFF_RIFPA (P30754) Fibril-forming collagen alpha chain (Fragment)| Length = 1027 Score = 27.7 bits (60), Expect = 6.9 Identities = 28/81 (34%), Positives = 33/81 (40%), Gaps = 4/81 (4%) Frame = -3 Query: 391 GVHGHARRAGM--DKGWGDQPGI*GVQGE--HQEDRGAGG*VEQRPRPEKPTRRRHGAVC 224 G+ G A G DKGW PG+ G+QG H + G G P P GA Sbjct: 925 GMKGEAGGKGAKGDKGWTGLPGLQGLQGTPGHSGESGPPG----APGP-------RGA-- 971 Query: 223 AAQAVGR*SHGREDGDGDGHP 161 +A GR S G DG P Sbjct: 972 RGEAGGRGSQGPPGKDGQPGP 992
>SLOU_DROME (P22807) Homeobox protein slou (S59/2) (Protein slouch) (Homeobox| protein NK-1) Length = 659 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/55 (25%), Positives = 20/55 (36%) Frame = +1 Query: 73 AGPRD*RHSYLRLVESHTHTQGSSNGDAVGDAHLHHHLLVRGITVRRPEQHIRHH 237 A P +H + L++ H H + A H+HHH P H H Sbjct: 169 ARPEPLQHPHAALLQQHPHLLQNPQFLAAAQQHMHHHQHQHHQHPAHPHSHQHPH 223
>DEFR7_MOUSE (P50715) Defensin-related cryptdin, related sequence 7 precursor| (Cryptdin-related protein 4C-2) (CRS4C) Length = 91 Score = 27.7 bits (60), Expect = 6.9 Identities = 12/22 (54%), Positives = 12/22 (54%) Frame = +3 Query: 270 RCSTHPPAPRSSWCSP*TPQMP 335 RC PP PR SWC P P P Sbjct: 64 RCPRCPPCPRCSWC-PRCPTCP 84
>SM50_STRPU (P11994) 50 kDa spicule matrix protein precursor| Length = 445 Score = 27.7 bits (60), Expect = 6.9 Identities = 12/27 (44%), Positives = 14/27 (51%) Frame = -3 Query: 364 GMDKGWGDQPGI*GVQGEHQEDRGAGG 284 G GWG+QPG+ G Q G GG Sbjct: 270 GQQPGWGNQPGVGGRQPGMGGQPGVGG 296
>CTTB2_HORSE (Q2QLA2) Cortactin-binding protein 2 (CortBP2)| Length = 1665 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 2/50 (4%) Frame = +3 Query: 252 GFSGRGRCSTHPPAPRSSWCSP*TPQMPG*SPHPL--SMPALRACPCTPH 395 G S G T+PP R+S +P ++ +P P+ P L P PH Sbjct: 512 GVSPTGDVGTYPPVGRTSLKTPGVARVDRGNPPPIPPKKPGLSQTPSPPH 561
>YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5| Length = 388 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +3 Query: 285 PPAPRSSWCSP*TPQMPG*SPHPLSMPALRACP 383 PP P S P P PG +P P MP + P Sbjct: 288 PPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 320
>TSGA_BUCAI (P57601) Protein tsgA homolog| Length = 388 Score = 27.3 bits (59), Expect = 9.0 Identities = 10/23 (43%), Positives = 16/23 (69%) Frame = -1 Query: 342 INQAFEEFKESTRKIVEQVDEWN 274 IN +FE+FK +T+ E ++WN Sbjct: 181 INSSFEKFKTNTKNSKETKEKWN 203
>PURA_METBF (Q46FF6) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 424 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = -1 Query: 390 EYMGTHEE-PAWTKDGVINQAFEEFKESTRKIVEQVDE 280 E M +E+ P W D +AFEE E+ R V++++E Sbjct: 365 ECMPVYEDLPGWETDLTEVKAFEELPENARNYVKRLEE 402
>COAT_PAVHB (P07299) Probable coat protein VP1| Length = 781 Score = 27.3 bits (59), Expect = 9.0 Identities = 16/41 (39%), Positives = 19/41 (46%) Frame = -1 Query: 321 FKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGD 199 FK RK + WN P H AG +PYVL P+ D Sbjct: 719 FKLGPRKATGR---WNPQPGVYPPHAAGHLPYVLYDPTATD 756
>SYV_ANAMM (Q5P9M8) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 823 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +1 Query: 97 SYLRLVESHTHTQGSSNGDAVGDAHLHHHL 186 +YL LV+ + GS++G A + LHH L Sbjct: 669 NYLELVKHRAYNHGSAHGHASAVSTLHHTL 698
>EDG8_HUMAN (Q9H228) Sphingosine 1-phosphate receptor Edg-8 (Endothelial| differentiation sphingolipid G-protein-coupled receptor 8) (Sphingosine 1-phosphate receptor 5) (S1P5) Length = 398 Score = 27.3 bits (59), Expect = 9.0 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = +1 Query: 43 NLVLIPIIPTAGPRD*RHSYLRLVESHTHTQG 138 N +L PII T RD RH+ LRLV H+ G Sbjct: 298 NSLLNPIIYTLTNRDLRHALLRLVCCGRHSCG 329
>AOSL_PLEHO (O16025) Allene oxide synthase-lipoxygenase protein [Includes: Allene| oxide synthase (EC 4.2.1.92) (Hydroperoxidehydrase); Arachidonate 8-lipoxygenase (EC 1.13.11.40)] Length = 1066 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/62 (24%), Positives = 28/62 (45%) Frame = -1 Query: 396 DEEYMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLL 217 DE Y+G + AW ++ A F++ I +++ + N + + VPY+ L Sbjct: 1006 DERYLGNYSATAWEDKDALD-AINRFQDKLEDISKKIKQRNENLE---------VPYIYL 1055 Query: 216 RP 211 P Sbjct: 1056 LP 1057
>FMNL_HUMAN (O95466) Formin-like 1 protein (Formin-like protein) (Leukocyte| formin) (CLL-associated antigen KW-13) Length = 1100 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/41 (29%), Positives = 21/41 (51%) Frame = -1 Query: 390 EYMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNND 268 EY G E P T G+ F F ++ +K ++V++W + Sbjct: 972 EYFG--ENPKTTSPGLFFSLFSRFIKAYKKAEQEVEQWKKE 1010 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,740,646 Number of Sequences: 219361 Number of extensions: 1427325 Number of successful extensions: 4504 Number of sequences better than 10.0: 64 Number of HSP's better than 10.0 without gapping: 4275 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4472 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 1370455656 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
