ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbastl39c05 |
|---|---|
| Clone Library Name | barley_pub |
>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)| (LOX-100) (LOX2:Hv:1) Length = 936 Score = 136 bits (343), Expect = 1e-32 Identities = 68/75 (90%), Positives = 68/75 (90%), Gaps = 5/75 (6%) Frame = -3 Query: 353 KDGVINQAFEEFKESPRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPS-----DGDPPD 189 KDGVINQAFEEFKES RKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPS DGDP D Sbjct: 862 KDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDGDPTD 921 Query: 188 EKMVMEMGIPNSISI 144 EKMVMEMGIPNSISI Sbjct: 922 EKMVMEMGIPNSISI 936
>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:2) Length = 932 Score = 99.8 bits (247), Expect = 2e-21 Identities = 45/70 (64%), Positives = 57/70 (81%) Frame = -3 Query: 353 KDGVINQAFEEFKESPRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPPDEKMVM 174 +DG +++AF+ F++ R I EQV+EWN D R+NRHGAG+VPYVLLRP +G+P D K VM Sbjct: 863 RDGEVDKAFQVFQKKMRDIAEQVEEWNKDDSRRNRHGAGVVPYVLLRPLNGNPMDAKTVM 922 Query: 173 EMGIPNSISI 144 EMGIPNSISI Sbjct: 923 EMGIPNSISI 932
>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:3) Length = 896 Score = 53.5 bits (127), Expect = 1e-07 Identities = 30/67 (44%), Positives = 40/67 (59%) Frame = -3 Query: 344 VINQAFEEFKESPRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPPDEKMVMEMG 165 ++ AFE+F ++ +D NN+P+ KNR GAG+VPY LL+P E V G Sbjct: 835 MVKAAFEKFSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYELLKPF-----SEPGVTGRG 889 Query: 164 IPNSISI 144 IPNSISI Sbjct: 890 IPNSISI 896
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 50.4 bits (119), Expect = 1e-06 Identities = 29/64 (45%), Positives = 38/64 (59%) Frame = -3 Query: 335 QAFEEFKESPRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPPDEKMVMEMGIPN 156 +AFE+F E ++I + +DE N+D KNR G +PY LL PS E V GIPN Sbjct: 801 EAFEKFGEKVKEIEKNIDERNDDETLKNRTGLVKMPYTLLFPS-----SEGGVTGRGIPN 855 Query: 155 SISI 144 S+SI Sbjct: 856 SVSI 859
>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)| Length = 899 Score = 50.1 bits (118), Expect = 1e-06 Identities = 25/63 (39%), Positives = 37/63 (58%) Frame = -3 Query: 332 AFEEFKESPRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPPDEKMVMEMGIPNS 153 A EF R+ E+++ N DP R+NR GAG++PY L+ PS G + G+PNS Sbjct: 842 AAREFAADVRRAEEEIERRNADPSRRNRCGAGVLPYELMAPSSGPG-----ITCRGVPNS 896 Query: 152 ISI 144 ++I Sbjct: 897 VTI 899
>LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13.11.12)| Length = 896 Score = 49.3 bits (116), Expect = 2e-06 Identities = 31/67 (46%), Positives = 39/67 (58%) Frame = -3 Query: 344 VINQAFEEFKESPRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPPDEKMVMEMG 165 VIN AFE FK + + +DE N + KNR GAG+V Y LL+P+ E V MG Sbjct: 835 VINAAFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLKPT-----SEHGVTGMG 889 Query: 164 IPNSISI 144 +P SISI Sbjct: 890 VPYSISI 896
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 48.1 bits (113), Expect = 5e-06 Identities = 28/69 (40%), Positives = 40/69 (57%) Frame = -3 Query: 350 DGVINQAFEEFKESPRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPPDEKMVME 171 D V +AF+ F + +I E++ + NND +NR+G +PY LL PS E+ + Sbjct: 803 DSVPKEAFKRFGKKLAEIEEKLTQRNNDESLRNRYGPVKMPYTLLYPS-----SEEGLTC 857 Query: 170 MGIPNSISI 144 GIPNSISI Sbjct: 858 RGIPNSISI 866
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 45.8 bits (107), Expect = 3e-05 Identities = 28/59 (47%), Positives = 34/59 (57%) Frame = -3 Query: 320 FKESPRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPPDEKMVMEMGIPNSISI 144 F R+ E ++ N D RKNR GAG++PY LL PS PP V G+PNSISI Sbjct: 865 FAADVRRAEETIERRNADHGRKNRCGAGVLPYELLAPS--SPPG---VTCRGVPNSISI 918
>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)| Length = 924 Score = 45.4 bits (106), Expect = 3e-05 Identities = 26/69 (37%), Positives = 37/69 (53%) Frame = -3 Query: 350 DGVINQAFEEFKESPRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPPDEKMVME 171 D + A++ F ++I +D N D KNR GAG++PY L++P + V Sbjct: 861 DAAVQAAYDGFAARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPF-----SDSGVTG 915 Query: 170 MGIPNSISI 144 MGIPNS SI Sbjct: 916 MGIPNSTSI 924
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 45.4 bits (106), Expect = 3e-05 Identities = 28/65 (43%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Frame = -3 Query: 335 QAFEEFKESPRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGD-PPDEKMVMEMGIP 159 +AF+ F +I +V N DP RKNR G PY LL P+ D D + GIP Sbjct: 806 EAFKRFGARLTEIESRVVAMNKDPHRKNRVGPTNFPYTLLYPNTSDLKGDAAGLSARGIP 865 Query: 158 NSISI 144 NSISI Sbjct: 866 NSISI 870
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 44.7 bits (104), Expect = 6e-05 Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%) Frame = -3 Query: 335 QAFEEFKESPRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPPDEKM-VMEMGIP 159 + F+ F + +I +V N+DP+ KNR+G PY+LL P+ D + GIP Sbjct: 798 EVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIP 857 Query: 158 NSISI 144 NSISI Sbjct: 858 NSISI 862
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 44.3 bits (103), Expect = 7e-05 Identities = 25/64 (39%), Positives = 38/64 (59%) Frame = -3 Query: 335 QAFEEFKESPRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPPDEKMVMEMGIPN 156 +AF++F +I +++ + NND +NRHG +PY LL PS ++ + GIPN Sbjct: 803 EAFKKFGNKLAEIEKKLTQRNNDEKLRNRHGPVEMPYTLLYPS-----SKEGLTFRGIPN 857 Query: 155 SISI 144 SISI Sbjct: 858 SISI 861
>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC| 1.13.11.12) Length = 941 Score = 43.9 bits (102), Expect = 1e-04 Identities = 26/69 (37%), Positives = 36/69 (52%) Frame = -3 Query: 350 DGVINQAFEEFKESPRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPPDEKMVME 171 D + A+ F ++I +D N D KNR GAG++PY L++P + V Sbjct: 878 DAAVQAAYAGFTARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPF-----SDAGVTG 932 Query: 170 MGIPNSISI 144 MGIPNS SI Sbjct: 933 MGIPNSTSI 941
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 43.5 bits (101), Expect = 1e-04 Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 1/65 (1%) Frame = -3 Query: 335 QAFEEFKESPRKIVEQVDEWNNDPD-RKNRHGAGMVPYVLLRPSDGDPPDEKMVMEMGIP 159 QAF++F ++I E++ NNDP + NR G +PY LL PS E+ + GIP Sbjct: 780 QAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPS-----SEEGLTFRGIP 834 Query: 158 NSISI 144 NSISI Sbjct: 835 NSISI 839
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 43.5 bits (101), Expect = 1e-04 Identities = 25/64 (39%), Positives = 37/64 (57%) Frame = -3 Query: 335 QAFEEFKESPRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPPDEKMVMEMGIPN 156 +AF+ F + +I +++ E N D +NR+G +PY LL PS E+ + GIPN Sbjct: 795 EAFKRFGKKLEEIEKKLIEKNKDETLRNRYGPAKMPYTLLYPS-----SEEGLTFRGIPN 849 Query: 155 SISI 144 SISI Sbjct: 850 SISI 853
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 43.5 bits (101), Expect = 1e-04 Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%) Frame = -3 Query: 332 AFEEFKESPRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPPDEK--MVMEMGIP 159 AF+ F I ++ + N + KNR+G +PY+LL P+ D EK + MGIP Sbjct: 813 AFKRFGSRLVDIENRIKDMNGNSALKNRNGPVKMPYMLLYPNTSDVTKEKGQGLTAMGIP 872 Query: 158 NSISI 144 NSISI Sbjct: 873 NSISI 877
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 42.4 bits (98), Expect = 3e-04 Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 4/68 (5%) Frame = -3 Query: 335 QAFEEFKESPRKIVE---QVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPPD-EKMVMEM 168 +A E FK R++VE +V N DP KNR G PY L+ P+ D + + Sbjct: 796 KALEAFKRFSRQLVEIESKVLNMNKDPLLKNRVGPANFPYTLMFPNTSDNKGAAEGITAR 855 Query: 167 GIPNSISI 144 GIPNSISI Sbjct: 856 GIPNSISI 863
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 42.0 bits (97), Expect = 4e-04 Identities = 25/64 (39%), Positives = 35/64 (54%) Frame = -3 Query: 335 QAFEEFKESPRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPPDEKMVMEMGIPN 156 QAF++F ++I E++ NND NR G +PY LL P+ + + GIPN Sbjct: 808 QAFQKFGNKLKEIEEKLARKNNDQSLSNRLGPVQLPYTLLH------PNSEGLTCRGIPN 861 Query: 155 SISI 144 SISI Sbjct: 862 SISI 865
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 41.6 bits (96), Expect = 5e-04 Identities = 25/64 (39%), Positives = 35/64 (54%) Frame = -3 Query: 335 QAFEEFKESPRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPPDEKMVMEMGIPN 156 +AF+ F +I ++ E NND +NR G +PY LL PS ++ + GIPN Sbjct: 799 EAFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQMPYTLLLPS-----SKEGLTFRGIPN 853 Query: 155 SISI 144 SISI Sbjct: 854 SISI 857
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 41.6 bits (96), Expect = 5e-04 Identities = 25/64 (39%), Positives = 35/64 (54%) Frame = -3 Query: 335 QAFEEFKESPRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPPDEKMVMEMGIPN 156 QAF++F +I ++ NNDP +R G +PY LL PS ++ + GIPN Sbjct: 806 QAFQKFGNKLAEIEAKLTNKNNDPSLYHRVGPVQLPYTLLHPS-----SKEGLTFRGIPN 860 Query: 155 SISI 144 SISI Sbjct: 861 SISI 864
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 41.2 bits (95), Expect = 6e-04 Identities = 25/64 (39%), Positives = 37/64 (57%) Frame = -3 Query: 335 QAFEEFKESPRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPPDEKMVMEMGIPN 156 QAF+ F + ++I E++ N D +NR+G +PY +L P+ DE + GIPN Sbjct: 803 QAFKRFGQKLKEIEEKIMGRNKDSSLRNRNGPVKMPYTVLLPT---CEDEGLTFR-GIPN 858 Query: 155 SISI 144 SISI Sbjct: 859 SISI 862
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 40.8 bits (94), Expect = 8e-04 Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Frame = -3 Query: 335 QAFEEFKESPRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPPDEKM-VMEMGIP 159 +AF F + +I +V N D KNR+G PY+LL P+ D + GIP Sbjct: 802 EAFRRFSDRLVEIEGKVVGMNGDAGLKNRNGPAEFPYMLLYPNTSDVTGAAAGITAKGIP 861 Query: 158 NSISI 144 NSISI Sbjct: 862 NSISI 866
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 39.3 bits (90), Expect = 0.002 Identities = 24/64 (37%), Positives = 34/64 (53%) Frame = -3 Query: 335 QAFEEFKESPRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPPDEKMVMEMGIPN 156 +AF+ F I +++ N+DP +NR G +PY LL S E+ + GIPN Sbjct: 806 EAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLLHRS-----SEEGLTFKGIPN 860 Query: 155 SISI 144 SISI Sbjct: 861 SISI 864
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 36.6 bits (83), Expect = 0.016 Identities = 24/63 (38%), Positives = 32/63 (50%) Frame = -3 Query: 332 AFEEFKESPRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPPDEKMVMEMGIPNS 153 AFE F + I ++ N+ KNR G VPY LL P+ E+ + GIPNS Sbjct: 802 AFERFGKMLSDIENRIMIMNSHKSWKNRSGPVNVPYTLLFPT-----SEEGLTGKGIPNS 856 Query: 152 ISI 144 +SI Sbjct: 857 VSI 859
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 35.0 bits (79), Expect = 0.045 Identities = 23/63 (36%), Positives = 31/63 (49%) Frame = -3 Query: 332 AFEEFKESPRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPPDEKMVMEMGIPNS 153 AF+ F + I +Q+ + N D NR G PY LL P+ E + GIPNS Sbjct: 804 AFDRFGKKLTDIEKQIIQRNGDNILTNRSGPVNAPYTLLFPT-----SEGGLTGKGIPNS 858 Query: 152 ISI 144 +SI Sbjct: 859 VSI 861
>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)| Length = 741 Score = 34.3 bits (77), Expect = 0.078 Identities = 16/43 (37%), Positives = 26/43 (60%) Frame = -3 Query: 335 QAFEEFKESPRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPS 207 +AF+ F + +I +++ + NND +NR G +PY LL PS Sbjct: 689 EAFKRFGKKLAEIEKKLVQKNNDETLRNRTGPAKMPYTLLYPS 731
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 33.5 bits (75), Expect = 0.13 Identities = 23/63 (36%), Positives = 30/63 (47%) Frame = -3 Query: 332 AFEEFKESPRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPPDEKMVMEMGIPNS 153 AFE F I +Q+ + N + NR G PY LL P+ E + GIPNS Sbjct: 803 AFERFGNKLTDIEKQIMQRNGNNILTNRTGPVNAPYTLLFPT-----SEGGLTGKGIPNS 857 Query: 152 ISI 144 +SI Sbjct: 858 VSI 860
>CPD1_DROME (P22058) Chromosomal protein D1| Length = 355 Score = 31.2 bits (69), Expect = 0.66 Identities = 22/68 (32%), Positives = 34/68 (50%) Frame = -2 Query: 336 PGI*GVQGEPQEDRGAGG*VEQRPRPEKPTRRRHGAVCAAQAVGR*SPGREDGDGDGHPQ 157 PGI +G P +++G+ G QR RP K ++ ++ + G EDGDGDG Sbjct: 31 PGI-KKRGRPAKNKGSSGGGGQRGRPPKASKIQNDEDPEDE-------GEEDGDGDGSGA 82 Query: 156 QHLHLSCP 133 + + S P Sbjct: 83 ELANNSSP 90
>COAT_PAVHB (P07299) Probable coat protein VP1| Length = 781 Score = 30.4 bits (67), Expect = 1.1 Identities = 17/41 (41%), Positives = 20/41 (48%) Frame = -3 Query: 320 FKESPRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGD 198 FK PRK + WN P H AG +PYVL P+ D Sbjct: 719 FKLGPRKATGR---WNPQPGVYPPHAAGHLPYVLYDPTATD 756
>DPY10_CAEEL (P35800) Cuticle collagen dpy-10 precursor (Protein dumpy-10)| Length = 356 Score = 29.3 bits (64), Expect = 2.5 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = +2 Query: 266 GRCSTHPPAPRSSWGSP*TPQMPG*SPHP 352 G C PP PR S G+P P +PG + P Sbjct: 123 GCCIPGPPGPRGSSGTPGKPGLPGNAGKP 151
>ASPA_PROMM (Q7V5L6) Probable aspartoacylase (EC 3.5.1.15)| Length = 304 Score = 28.9 bits (63), Expect = 3.3 Identities = 9/22 (40%), Positives = 15/22 (68%) Frame = -3 Query: 287 VDEWNNDPDRKNRHGAGMVPYV 222 +D+W+ P+ N HG G+VP + Sbjct: 23 LDQWSQTPELINTHGVGVVPVI 44
>MUTS_STRT2 (Q5M6I1) DNA mismatch repair protein mutS| Length = 852 Score = 28.1 bits (61), Expect = 5.6 Identities = 11/38 (28%), Positives = 20/38 (52%) Frame = -3 Query: 347 GVINQAFEEFKESPRKIVEQVDEWNNDPDRKNRHGAGM 234 G+I F+E + RK++ + W D + K R +G+ Sbjct: 410 GIIRDGFDETLDKYRKVMSEGTSWIADIEAKEREASGI 447
>MUTS_STRT1 (Q5M1Z0) DNA mismatch repair protein mutS| Length = 852 Score = 28.1 bits (61), Expect = 5.6 Identities = 11/38 (28%), Positives = 20/38 (52%) Frame = -3 Query: 347 GVINQAFEEFKESPRKIVEQVDEWNNDPDRKNRHGAGM 234 G+I F+E + RK++ + W D + K R +G+ Sbjct: 410 GIIRDGFDETLDKYRKVMSEGTSWIADIEAKEREASGI 447
>RHBB_RHIME (Q9Z3R1) L-2,4-diaminobutyrate decarboxylase (EC 4.1.1.-) (DABA| decarboxylase) (DABA-DC) Length = 495 Score = 28.1 bits (61), Expect = 5.6 Identities = 19/48 (39%), Positives = 20/48 (41%) Frame = -2 Query: 267 PRPEKPTRRRHGAVCAAQAVGR*SPGREDGDGDGHPQQHLHLSCPVCV 124 P PE T G A +GR P E GHP HL CPV V Sbjct: 72 PLPEVGT----GIAAALAEIGR--PALEHAMVVGHPAAMAHLHCPVAV 113
>SHPS1_MOUSE (P97797) Tyrosine-protein phosphatase non-receptor type substrate 1| precursor (SHP substrate 1) (SHPS-1) (Inhibitory receptor SHPS-1) (Signal-regulatory protein alpha-1) (Sirp-alpha-1) (mSIRP-alpha1) (MyD-1 antigen) (Brain Ig-like molecule wi Length = 513 Score = 27.7 bits (60), Expect = 7.3 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = -3 Query: 272 NDPDRKNRHGAGMVPYVLLRPSDGDPPDEKMVMEMGIPN 156 ++PD + + G G YVL +PS PP+ + GIP+ Sbjct: 129 SEPDTEIQSGGGTEVYVLAKPS---PPEVSGPADRGIPD 164
>UREE_RHOS4 (Q3J156) Urease accessory protein ureE| Length = 182 Score = 27.7 bits (60), Expect = 7.3 Identities = 18/53 (33%), Positives = 24/53 (45%) Frame = -2 Query: 297 RGAGG*VEQRPRPEKPTRRRHGAVCAAQAVGR*SPGREDGDGDGHPQQHLHLS 139 RG G +E R P +P GA + +G G G G HP H+H+S Sbjct: 120 RGLGLTLEPRTEPFRP---EGGAYGHGRTLGH-DHGPAQGHGHDHPHVHVHIS 168
>KCNA4_BOVIN (Q05037) Potassium voltage-gated channel subfamily A member 4| (Voltage-gated potassium channel subunit Kv1.4) (BAK4) Length = 660 Score = 27.3 bits (59), Expect = 9.5 Identities = 16/46 (34%), Positives = 18/46 (39%) Frame = -2 Query: 264 RPEKPTRRRHGAVCAAQAVGR*SPGREDGDGDGHPQQHLHLSCPVC 127 R + R H AA AV + E G G G Q H H S C Sbjct: 26 RARERERLAHSRAAAAAAVAAATAAVEGGGGSGGSQHHHHPSRGAC 71
>CELR2_MOUSE (Q9R0M0) Cadherin EGF LAG seven-pass G-type receptor 2 precursor| (Flamingo 1) (mFmi1) Length = 2920 Score = 27.3 bits (59), Expect = 9.5 Identities = 13/39 (33%), Positives = 17/39 (43%) Frame = +1 Query: 229 GTMPAPCRFFRSGSLFHSSTCSTIFLGLSLNSSNAWLIT 345 G PCR SG S C+ + ++SN WL T Sbjct: 31 GDQVGPCRSLGSGGRSSSGACAPVGWLCPASASNLWLYT 69
>PYRD_THETN (Q8R9R7) Dihydroorotate dehydrogenase (EC 1.3.3.1) (Dihydroorotate| oxidase) (DHOdehase) (DHODase) (DHOD) Length = 301 Score = 27.3 bits (59), Expect = 9.5 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = -3 Query: 254 NRHGAGMVPYVLLRPSDGDPPDEKMVMEMGIPNSISI 144 N+ GA +V + ++P +G+PP GI NSI + Sbjct: 36 NKLGAIVVKGLTVKPREGNPPPRLFETASGILNSIGL 72 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,955,074 Number of Sequences: 219361 Number of extensions: 1236952 Number of successful extensions: 3516 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 3244 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3492 length of database: 80,573,946 effective HSP length: 93 effective length of database: 60,173,373 effective search space used: 1444160952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
