>CH60_PORPU (P51349) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 528

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 18/47 (38%), Positives = 25/47 (53%)
 Frame = -3

Query: 184 TQDAG*DVCTVCVDFNWAGSHVPVTRPRMIWINDGEQGTLAGRCDQI 44
           T+DAG  + TV +D       V VT+     I DG + T+  RC+QI
Sbjct: 302 TEDAGFSLDTVQLDMLGKARRVVVTKDSTTIIADGHEATVKSRCEQI 348

>LPQH_MYCAV (P46733) Lipoprotein lpqH precursor (19 kDa lipoprotein antigen)|
          Length = 161

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = +1

Query: 142 NRHIRYIHPNPRLVSCLVTGLQ--DKNYPSLVTDARHQRSSPSSSFTGPPASSG 297
           NR +R+    P +++ +V+G    +K+ PS         SS SSS T P ASSG
Sbjct: 2   NRQLRFAVAGPEILAAVVSGCSSGNKSAPS---------SSASSSSTSPSASSG 46

>FOLD_STRTR (P96050) FolD bifunctional protein [Includes:|
           Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5);
           Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
          Length = 284

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 13/33 (39%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +3

Query: 9   DNTRPINPDTHHIWSQRPASVPCSPS-LIQIIR 104
           D   P+N  T ++W+ RP  VPC+P+ +++I+R
Sbjct: 120 DGFHPMN--TGNLWNGRPQMVPCTPAGIMEILR 150

>NFYA3_ARATH (Q93ZH2) Nuclear transcription factor Y subunit A-3 (AtNF-YA-3)|
           (Transcriptional activator HAP2C)
          Length = 340

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 18/53 (33%), Positives = 26/53 (49%)
 Frame = +3

Query: 60  PASVPCSPSLIQIIRGRVTGTWLPAQLKSTHTVHTS*PASCVVSRYRFTRQKL 218
           P +  C+P ++ +I GRV    LPA+L  T  V  +      + R R  R KL
Sbjct: 152 PQAPTCNPQMVSMIPGRVP---LPAELTETDPVFVNAKQYHAIMRRRQQRAKL 201

>EPHB4_MOUSE (P54761) Ephrin type-B receptor 4 precursor (EC 2.7.10.1)|
           (Tyrosine-protein kinase receptor MDK-2) (Developmental
           kinase 2) (Tyrosine kinase MYK-1)
          Length = 987

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
 Frame = +1

Query: 208 DKNYPSLVTDARHQRSSPSS---SFTGPPASSGA 300
           D+  P  V+D R  RSSPSS   S+  P A SGA
Sbjct: 430 DREVPPAVSDIRVTRSSPSSLILSWAIPRAPSGA 463

>GP49A_MOUSE (Q61450) Mast cell surface glycoprotein Gp49A precursor|
          Length = 303

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = +2

Query: 11  QHKANKPRHSSYLVTAASKRTLLTIIDPNHPGS--CYRY 121
           QH+AN+P H+++++ A         + PNH G+  CY +
Sbjct: 170 QHQANQPTHATFVLDA---------VAPNHNGTFRCYGF 199

>NCK2_HUMAN (O43639) Cytoplasmic protein NCK2 (NCK adaptor protein 2) (SH2/SH3|
           adaptor protein NCK-beta) (Nck-2)
          Length = 380

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = +1

Query: 199 GLQDKNYPSLVTD--ARHQRSSPSSSFTGPPAS 291
           GL  KNY  +++D  A H   +P  S+TGP +S
Sbjct: 245 GLVPKNYVVVLSDGPALHPAHAPQISYTGPSSS 277

>VD4L_CWPXG (O73579) Ankyrin repeat protein D4L/I2R|
          Length = 672

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +1

Query: 142 NRHIRYIHPNPRLVSCLVTGLQDKNYPSLV 231
           NR IRY++P P L       + D ++PS V
Sbjct: 532 NRDIRYLYPEPLLACIRYALILDDDFPSKV 561

>LIRB4_MOUSE (Q64281) Leukocyte immunoglobulin-like receptor subfamily B member|
           4 precursor (Mast cell surface glycoprotein Gp49B)
          Length = 335

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = +2

Query: 11  QHKANKPRHSSYLVTAASKRTLLTIIDPNHPGS--CYRY 121
           QH+AN+P ++++++ A         + PNH G+  CY Y
Sbjct: 170 QHQANQPSYATFVLDA---------VTPNHNGTFRCYGY 199

>CH60_GRATL (Q6B911) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 528

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = -3

Query: 184 TQDAG*DVCTVCVDFNWAGSHVPVTRPRMIWINDGEQGTLAGRCDQI 44
           TQD G  + ++ +D   +   V +T+     + D ++  +  RCDQI
Sbjct: 302 TQDMGLSLDSMSLDQLGSARRVQITKDSTTIVADAQKDLIQARCDQI 348

>UBP28_HUMAN (Q96RU2) Ubiquitin carboxyl-terminal hydrolase 28 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 28)
           (Ubiquitin-specific-processing protease 28)
           (Deubiquitinating enzyme 28)
          Length = 1077

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = +2

Query: 128 ACPVEIDTYGTYILTRVLCRVSLQVYK--TKTIQASLQMQDT 247
           +CP E DT+ T  L+ V C VS Q  K  T T  +S  ++ T
Sbjct: 460 SCPPESDTHMTLPLSSVHCSVSDQTSKESTSTESSSQDVEST 501


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,381,701
Number of Sequences: 219361
Number of extensions: 977237
Number of successful extensions: 2266
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2266
length of database: 80,573,946
effective HSP length: 79
effective length of database: 63,244,427
effective search space used: 1517866248
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)