>LYST_HUMAN (Q99698) Lysosomal trafficking regulator (Beige homolog)|
          Length = 3801

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 18/56 (32%), Positives = 28/56 (50%)
 Frame = -2

Query: 223 ERTAPNHEEREELNVATAAISNCIKSSFLCLFEMANCTCRAVSCR*ESSTLLKMIL 56
           +R     EE EE ++AT          FL L ++ +   +A++CR E  TLL  +L
Sbjct: 25  QRVEAREEEEEETHMATLGQYLVHGRGFLLLTKLNSIIDQALTCREELLTLLLSLL 80

>LYST_MOUSE (P97412) Lysosomal trafficking regulator (Beige protein) (CHS1|
           homolog)
          Length = 3788

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 18/56 (32%), Positives = 28/56 (50%)
 Frame = -2

Query: 223 ERTAPNHEEREELNVATAAISNCIKSSFLCLFEMANCTCRAVSCR*ESSTLLKMIL 56
           +R     EE EE ++AT          FL L ++ +   +A++CR E  TLL  +L
Sbjct: 25  QRAEAREEEEEETHMATLGQYLVHGRGFLLLTKLNSIIDQALTCREELLTLLLSLL 80

>FBX27_HUMAN (Q8NI29) F-box only protein 27 (F-box/G-domain protein 5)|
          Length = 283

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 8/43 (18%)
 Frame = -1

Query: 293 KNWRALIFGPQIWLMALNPSH--------QWRKNCSEPRRTRR 189
           + WRAL+ G  +WL+ L   H           ++C  P R  R
Sbjct: 55  RGWRALVDGQALWLLILARDHGATGRALLHLARSCQSPARNAR 97

>FBX27_MACFA (Q9N0C8) F-box only protein 27|
          Length = 280

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 8/43 (18%)
 Frame = -1

Query: 293 KNWRALIFGPQIWLMALNPSH--------QWRKNCSEPRRTRR 189
           + WRAL+ G  +WL+ L   H           ++C  P R  R
Sbjct: 57  RGWRALVDGQALWLLILARDHSATGRALLHLARSCQSPARNAR 99

>VG71_SHV21 (Q01044) Hypothetical gene 71 protein|
          Length = 167

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -2

Query: 184 NVATAAISNCIKSSFLCLFEMANCTCRAVSC 92
           NVA  ++  C+ S+ LC   +  C C+   C
Sbjct: 124 NVAAPSVILCVFSNMLCEMHVLECLCQLKKC 154


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,209,014
Number of Sequences: 219361
Number of extensions: 650500
Number of successful extensions: 1638
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1638
length of database: 80,573,946
effective HSP length: 75
effective length of database: 64,121,871
effective search space used: 1538924904
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)