ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl39a12 |
|---|---|
| Clone Library Name | barley_pub |
>RL36A_ARATH (O80929) 60S ribosomal protein L36-1| Length = 113 Score = 113 bits (283), Expect = 1e-25 Identities = 58/72 (80%), Positives = 62/72 (86%) Frame = -2 Query: 386 LFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTPKRAKKKREEMSSVLRKM 207 +F+R LIREVAG APYEKRITELLKVGKDKRALKVAKRKLGT KRAK+KREEMSSVLRKM Sbjct: 41 IFIRKLIREVAGMAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKM 100 Query: 206 RSXXXXXXGDKK 171 RS +KK Sbjct: 101 RSLGGAAAAEKK 112
>RL36C_ARATH (Q9LZ57) 60S ribosomal protein L36-3| Length = 108 Score = 112 bits (279), Expect = 3e-25 Identities = 58/72 (80%), Positives = 62/72 (86%) Frame = -2 Query: 386 LFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTPKRAKKKREEMSSVLRKM 207 +F+RNLI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGT KRAK+KREEMSSVLRKM Sbjct: 37 IFIRNLIKEVAGQAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKM 96 Query: 206 RSXXXXXXGDKK 171 RS KK Sbjct: 97 RSGGAGASEKKK 108
>RL36B_ARATH (Q9M352) 60S ribosomal protein L36-2| Length = 112 Score = 111 bits (278), Expect = 4e-25 Identities = 58/72 (80%), Positives = 62/72 (86%) Frame = -2 Query: 386 LFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTPKRAKKKREEMSSVLRKM 207 +F+RNLI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGT KRAK+KREEMSSVLRKM Sbjct: 41 IFIRNLIKEVAGQAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKM 100 Query: 206 RSXXXXXXGDKK 171 RS KK Sbjct: 101 RSGGGGATEKKK 112
>RL36_ENTCP (Q9LRB8) 60S ribosomal protein L36| Length = 101 Score = 90.9 bits (224), Expect = 7e-19 Identities = 44/60 (73%), Positives = 53/60 (88%) Frame = -2 Query: 380 VRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTPKRAKKKREEMSSVLRKMRS 201 VR ++REVAG+APYE+R+ ELLKVGKDKRALK+ KRKLGT R KKKREEM+ VLRKM++ Sbjct: 37 VRAVVREVAGWAPYERRVMELLKVGKDKRALKMCKRKLGTHMRGKKKREEMAGVLRKMQA 96
>RL36_PONPY (Q5RAZ9) 60S ribosomal protein L36| Length = 104 Score = 83.6 bits (205), Expect = 1e-16 Identities = 41/60 (68%), Positives = 50/60 (83%) Frame = -2 Query: 383 FVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTPKRAKKKREEMSSVLRKMR 204 FVR++IREV GFAPYE+R ELLKV KDKRALK K+++GT RAK+KREE+S+VL MR Sbjct: 38 FVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMR 97
>RL36_HUMAN (Q9Y3U8) 60S ribosomal protein L36| Length = 104 Score = 83.6 bits (205), Expect = 1e-16 Identities = 41/60 (68%), Positives = 50/60 (83%) Frame = -2 Query: 383 FVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTPKRAKKKREEMSSVLRKMR 204 FVR++IREV GFAPYE+R ELLKV KDKRALK K+++GT RAK+KREE+S+VL MR Sbjct: 38 FVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMR 97
>RL36_BOVIN (Q3T171) 60S ribosomal protein L36| Length = 104 Score = 83.6 bits (205), Expect = 1e-16 Identities = 41/60 (68%), Positives = 50/60 (83%) Frame = -2 Query: 383 FVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTPKRAKKKREEMSSVLRKMR 204 FVR++IREV GFAPYE+R ELLKV KDKRALK K+++GT RAK+KREE+S+VL MR Sbjct: 38 FVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMR 97
>RL36_DROME (P49630) 60S ribosomal protein L36 (Protein minute(1)1B)| Length = 115 Score = 82.8 bits (203), Expect = 2e-16 Identities = 40/60 (66%), Positives = 50/60 (83%) Frame = -2 Query: 383 FVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTPKRAKKKREEMSSVLRKMR 204 F+R+L+REV G APYEKR ELLKV KDKRALK KR+LGT RAK+KREE+S++L ++R Sbjct: 49 FMRDLVREVVGHAPYEKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLR 108
>RL36_RAT (P39032) 60S ribosomal protein L36| Length = 104 Score = 81.3 bits (199), Expect = 5e-16 Identities = 40/60 (66%), Positives = 49/60 (81%) Frame = -2 Query: 383 FVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTPKRAKKKREEMSSVLRKMR 204 FVR++IREV FAPYE+R ELLKV KDKRALK K+++GT RAK+KREE+S+VL MR Sbjct: 38 FVRDMIREVCAFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMR 97
>RL36_MOUSE (P47964) 60S ribosomal protein L36| Length = 104 Score = 79.3 bits (194), Expect = 2e-15 Identities = 39/59 (66%), Positives = 48/59 (81%) Frame = -2 Query: 383 FVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTPKRAKKKREEMSSVLRKM 207 FVR++IREV GFAPYE+R ELLKV K KRALK K+++GT RAK+KREE+S+VL M Sbjct: 38 FVRDMIREVCGFAPYERRAMELLKVSKSKRALKFIKKRVGTHIRAKRKREELSNVLAAM 96
>RL36B_SCHPO (O94658) 60S ribosomal protein L36-B| Length = 99 Score = 77.8 bits (190), Expect = 6e-15 Identities = 36/60 (60%), Positives = 51/60 (85%) Frame = -2 Query: 383 FVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTPKRAKKKREEMSSVLRKMR 204 FVR+++REVAGFAPYE+R+ EL++ +DKRA K+AK++LGT KRAK K EE++SV++ R Sbjct: 37 FVRSIVREVAGFAPYERRVMELIRNSQDKRARKLAKKRLGTLKRAKGKIEELTSVIQSSR 96
>RL36A_SCHPO (Q92365) 60S ribosomal protein L36-A| Length = 99 Score = 77.8 bits (190), Expect = 6e-15 Identities = 36/60 (60%), Positives = 51/60 (85%) Frame = -2 Query: 383 FVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTPKRAKKKREEMSSVLRKMR 204 FVR+++REVAGFAPYE+R+ EL++ +DKRA K+AK++LGT KRAK K EE++SV++ R Sbjct: 37 FVRSIVREVAGFAPYERRVMELIRNSQDKRARKLAKKRLGTLKRAKGKIEELTSVIQSSR 96
>RL36_CAEEL (P49181) 60S ribosomal protein L36| Length = 103 Score = 77.0 bits (188), Expect = 1e-14 Identities = 34/59 (57%), Positives = 47/59 (79%) Frame = -2 Query: 380 VRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTPKRAKKKREEMSSVLRKMR 204 VR L+RE+ GFAPYE+R+ E+L++ KDKRALK KR++GT +RAK KREE+ +V+ R Sbjct: 41 VRELVREITGFAPYERRVLEMLRISKDKRALKFLKRRIGTHRRAKGKREELQNVIIAQR 99
>RL36_DAUCA (P52866) 60S ribosomal protein L36| Length = 106 Score = 74.3 bits (181), Expect = 6e-14 Identities = 36/48 (75%), Positives = 42/48 (87%) Frame = -2 Query: 383 FVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTPKRAKKK 240 FVRNLIREVAGF PYEKRITELLKVGKDKRALKV + K+G + +K++ Sbjct: 42 FVRNLIREVAGFXPYEKRITELLKVGKDKRALKVRQEKVGHSQESKEE 89 Score = 35.8 bits (81), Expect = 0.026 Identities = 17/28 (60%), Positives = 21/28 (75%) Frame = -1 Query: 306 KGQACTQGRQEKAWYSQESKEEERGDVK 223 K + + RQEK +SQESKEEERGDV+ Sbjct: 68 KDKRALKVRQEKVGHSQESKEEERGDVQ 95
>RL36_TRIHM (Q9HFR7) 60S ribosomal protein L36 (TRP36)| Length = 105 Score = 70.5 bits (171), Expect = 9e-13 Identities = 33/60 (55%), Positives = 47/60 (78%) Frame = -2 Query: 383 FVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTPKRAKKKREEMSSVLRKMR 204 FVR +++EVAG APYE+R+ ELL+ KDKRA K+AK++LGT RAK+K +E+ V+ + R Sbjct: 43 FVREVVKEVAGLAPYERRVIELLRNSKDKRARKLAKKRLGTFGRAKRKVDELQRVIAESR 102
>RL36_CANAL (P47834) 60S ribosomal protein L36 (L39)| Length = 99 Score = 70.1 bits (170), Expect = 1e-12 Identities = 32/61 (52%), Positives = 49/61 (80%) Frame = -2 Query: 386 LFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTPKRAKKKREEMSSVLRKM 207 +FVR++++EVAG APYE+R+ EL++ +KRA K+AK++LGT KRA +K EEM+ V+ + Sbjct: 37 VFVRSIVKEVAGLAPYERRLIELIRNAGEKRAKKLAKKRLGTHKRALRKVEEMTQVIAES 96 Query: 206 R 204 R Sbjct: 97 R 97
>RL36B_YEAST (O14455) 60S ribosomal protein L36-B (L39B) (YL39)| Length = 99 Score = 66.2 bits (160), Expect = 2e-11 Identities = 30/60 (50%), Positives = 47/60 (78%) Frame = -2 Query: 383 FVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTPKRAKKKREEMSSVLRKMR 204 FVR+L+RE+AG +PYE+R+ +L++ +KRA KVAK++LG+ RAK K EEM++++ R Sbjct: 38 FVRSLVREIAGLSPYERRLIDLIRNSGEKRARKVAKKRLGSFTRAKAKVEEMNNIIAASR 97
>RL36A_YEAST (P05745) 60S ribosomal protein L36-A (L39A) (YL39)| Length = 99 Score = 66.2 bits (160), Expect = 2e-11 Identities = 30/60 (50%), Positives = 47/60 (78%) Frame = -2 Query: 383 FVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTPKRAKKKREEMSSVLRKMR 204 FVR+L+RE+AG +PYE+R+ +L++ +KRA KVAK++LG+ RAK K EEM++++ R Sbjct: 38 FVRSLVREIAGLSPYERRLIDLIRNSGEKRARKVAKKRLGSFTRAKAKVEEMNNIIAASR 97
>RS6_ICTPU (Q90YR8) 40S ribosomal protein S6| Length = 249 Score = 31.2 bits (69), Expect = 0.63 Identities = 16/41 (39%), Positives = 24/41 (58%) Frame = -2 Query: 347 APYEKRITELLKVGKDKRALKVAKRKLGTPKRAKKKREEMS 225 A Y K + + LK K+KR K+AKR+ + RA + + E S Sbjct: 207 AEYAKLLAKRLKEAKEKRQEKIAKRRRLSSLRASQSKSESS 247
>PK1IP_CHICK (Q5ZKU8) p21-activated protein kinase-interacting protein 1-like| (PAK1-interacting protein 1-like) Length = 369 Score = 29.6 bits (65), Expect = 1.8 Identities = 14/31 (45%), Positives = 21/31 (67%) Frame = -2 Query: 314 KVGKDKRALKVAKRKLGTPKRAKKKREEMSS 222 K+ K +R + AKRKL P + KKK+++ SS Sbjct: 338 KLTKQRRRIVPAKRKLEAPLQKKKKKKQNSS 368
>Y1220_SULTO (Q972A7) Hypothetical protein ST1220| Length = 163 Score = 29.3 bits (64), Expect = 2.4 Identities = 17/40 (42%), Positives = 21/40 (52%) Frame = -2 Query: 323 ELLKVGKDKRALKVAKRKLGTPKRAKKKREEMSSVLRKMR 204 E +V K +K AKRK KRA KK++ S RK R Sbjct: 122 EFSEVKPKKEKIKKAKRKKKGAKRASKKQKAKSKSARKSR 161
>MYO10_HUMAN (Q9HD67) Myosin-10 (Myosin X)| Length = 2058 Score = 28.5 bits (62), Expect = 4.1 Identities = 24/84 (28%), Positives = 37/84 (44%) Frame = -2 Query: 287 KVAKRKLGTPKRAKKKREEMSSVLRKMRSXXXXXXGDKKK*NFASRQFYRKTLSCPVLPI 108 KV R+ K K++ EE+S +R+ F +R+ YRK L C V+ Sbjct: 723 KVFLRESLEQKLEKRREEEVSHAAMVIRAHVL---------GFLARKQYRKVLYCVVIIQ 773 Query: 107 GTYRAMAVVDCGTTKFVTLSKPAV 36 YRA + +F+ L K A+ Sbjct: 774 KNYRAFLL----RRRFLHLKKAAI 793
>RS6_RAT (P62755) 40S ribosomal protein S6| Length = 249 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/41 (34%), Positives = 23/41 (56%) Frame = -2 Query: 347 APYEKRITELLKVGKDKRALKVAKRKLGTPKRAKKKREEMS 225 A Y K + + +K K+KR ++AKR+ + RA + E S Sbjct: 207 AEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESS 247
>RS6_MOUSE (P62754) 40S ribosomal protein S6 (Phosphoprotein NP33)| Length = 249 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/41 (34%), Positives = 23/41 (56%) Frame = -2 Query: 347 APYEKRITELLKVGKDKRALKVAKRKLGTPKRAKKKREEMS 225 A Y K + + +K K+KR ++AKR+ + RA + E S Sbjct: 207 AEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESS 247
>RS6_HUMAN (P62753) 40S ribosomal protein S6 (Phosphoprotein NP33)| Length = 249 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/41 (34%), Positives = 23/41 (56%) Frame = -2 Query: 347 APYEKRITELLKVGKDKRALKVAKRKLGTPKRAKKKREEMS 225 A Y K + + +K K+KR ++AKR+ + RA + E S Sbjct: 207 AEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESS 247
>RS6_CHICK (P47838) 40S ribosomal protein S6| Length = 249 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/41 (34%), Positives = 23/41 (56%) Frame = -2 Query: 347 APYEKRITELLKVGKDKRALKVAKRKLGTPKRAKKKREEMS 225 A Y K + + +K K+KR ++AKR+ + RA + E S Sbjct: 207 ADYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESS 247
>IF2P_HUMAN (O60841) Eukaryotic translation initiation factor 5B (eIF-5B)| (Translation initiation factor IF-2) Length = 1220 Score = 28.1 bits (61), Expect = 5.3 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Frame = -2 Query: 284 VAKRKLGTPKRAKKKREEMSSVLRKM--RSXXXXXXGDKKK*NFASRQFYRKTLSCPV 117 VA++K +R +KKR+E + LRK+ + D+ K + R+F +T+ V Sbjct: 228 VAQKKAEKKERERKKRDEEKAKLRKLKEKEELETGKKDQSKQKESQRKFEEETVKSKV 285
>RFIP1_HUMAN (Q6WKZ4) Rab11 family-interacting protein 1 (Rab11-FIP1)| (Rab-coupling protein) Length = 1283 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/35 (37%), Positives = 23/35 (65%) Frame = -2 Query: 320 LLKVGKDKRALKVAKRKLGTPKRAKKKREEMSSVL 216 +++VGK+K A V++R LG P ++ E+ S+L Sbjct: 44 VIQVGKEKYATSVSERSLGAPVWREEATFELPSLL 78
>NCPR_CANTR (P37201) NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR)| (P450R) Length = 680 Score = 28.1 bits (61), Expect = 5.3 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%) Frame = -2 Query: 377 RNLIREVAGFAPYEKRITELLKVGKDKR--ALKVAKRK 270 R +AGFAP E+ ++G DK+ A KV +RK Sbjct: 368 RQFFLSIAGFAPDEETKKSFTRIGGDKQEFASKVTRRK 405
>IMA5_HUMAN (O15131) Importin alpha-6 subunit (Karyopherin alpha-5 subunit)| Length = 536 Score = 27.7 bits (60), Expect = 7.0 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = -2 Query: 308 GKDKRALKVAKRKLGTPKRAKKKREEMSSVLRKMR 204 GKD +K K K P+ +++REE LRK + Sbjct: 5 GKDNYRMKSYKNKALNPQEMRRRREEEGIQLRKQK 39
>NCPR_CANMA (P50126) NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR)| (P450R) Length = 680 Score = 27.7 bits (60), Expect = 7.0 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 2/39 (5%) Frame = -2 Query: 377 RNLIREVAGFAPYEKRITELLKVGKDKR--ALKVAKRKL 267 R +AGFAP E+ ++G DK+ A K+ ++KL Sbjct: 368 RQFFLAIAGFAPDEETKKTFTRIGNDKQEFANKITRKKL 406
>FTHS1_LACAC (Q5FJY2) Formate--tetrahydrofolate ligase 1 (EC 6.3.4.3)| (Formyltetrahydrofolate synthetase 1) (FHS 1) (FTHFS 1) Length = 558 Score = 27.3 bits (59), Expect = 9.1 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 9/36 (25%) Frame = -2 Query: 338 EKRITELLKVGKDKRALKVA---------KRKLGTP 258 E++I EL K+GKDK + +A K+KLG P Sbjct: 470 EEQIKELAKIGKDKLPVIIAKTQYSFSDDKKKLGAP 505
>YCLF_SCHPO (Q9USM2) Hypothetical protein C16A11.15c in chromosome III| Length = 117 Score = 27.3 bits (59), Expect = 9.1 Identities = 15/40 (37%), Positives = 24/40 (60%) Frame = -3 Query: 376 GT*SGRLLDSLHMRNASLSFLRLERTSVHSRSPRESLVLP 257 G + R SL ++N ++ R +SVHSR+P+E V+P Sbjct: 17 GLPTARKACSLPIQNPVVAANRFFASSVHSRNPQEEDVIP 56
>MDR19_ARATH (Q9LSJ6) Putative multidrug resistance protein 19 (P-glycoprotein| 17) Length = 1240 Score = 27.3 bits (59), Expect = 9.1 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +3 Query: 303 LSNLKKLSDAFLIWSESSNLPDQVPD 380 LSNLK S+AF+ W + +VPD Sbjct: 316 LSNLKYFSEAFVAWERILEVIKRVPD 341
>MAK5_NEUCR (Q7RZH4) ATP-dependent RNA helicase mak-5 (EC 3.6.1.-)| Length = 805 Score = 27.3 bits (59), Expect = 9.1 Identities = 17/49 (34%), Positives = 25/49 (51%) Frame = -2 Query: 347 APYEKRITELLKVGKDKRALKVAKRKLGTPKRAKKKREEMSSVLRKMRS 201 APY + + V K KR L+VA + TP R + +SVL +R+ Sbjct: 317 APYICSVLGGMAVQKQKRQLQVADIVIATPGRMWEVMSSDNSVLASLRN 365
>DPO3A_THEMA (Q9ZHG4) DNA polymerase III alpha subunit (EC 2.7.7.7)| Length = 842 Score = 27.3 bits (59), Expect = 9.1 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Frame = -2 Query: 383 FVRNLIREVAGFAPYEKRITEL-LKVGKDKRALKVAKRKLGTPKRAKKKREEMSSVLRKM 207 F R + E G Y+++I L + G + +R + AKK+RE+M +L KM Sbjct: 456 FFRKMFPETRGVLIYQEQIMRLAMFAGLSGTEADILRRAI-----AKKEREKMEPLLEKM 510 Query: 206 R 204 + Sbjct: 511 K 511
>RFCL_METJA (Q58294) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) Length = 516 Score = 27.3 bits (59), Expect = 9.1 Identities = 13/36 (36%), Positives = 23/36 (63%) Frame = -2 Query: 338 EKRITELLKVGKDKRALKVAKRKLGTPKRAKKKREE 231 +K +E+LK+ K+K+ L+ K+K +KK+EE Sbjct: 402 DKLASEILKILKEKKKLERKKKKEKEKLEKEKKKEE 437
>RFIP1_MOUSE (Q9D620) Rab11 family-interacting protein 1 (Rab11-FIP1)| (Rab-coupling protein) Length = 645 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/26 (42%), Positives = 20/26 (76%), Gaps = 4/26 (15%) Frame = -1 Query: 288 QGRQEKAWYSQES----KEEERGDVK 223 QGR++K WY+ +S K++ERG+++ Sbjct: 120 QGRRKKQWYTLKSKPGKKDKERGEIE 145
>PPID_BUCAI (P57550) Peptidyl-prolyl cis-trans isomerase D (EC 5.2.1.8) (PPIase| D) (Rotamase D) Length = 623 Score = 27.3 bits (59), Expect = 9.1 Identities = 13/49 (26%), Positives = 26/49 (53%) Frame = -2 Query: 368 IREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTPKRAKKKREEMSS 222 IR + ++ EKR +++V ++A+ + R TP+ K +E S+ Sbjct: 258 IRNITQYSTKEKRRYSIIQVKNKQQAISILSRLHNTPEDFSKIAQEQST 306
>FTSK_CHLTE (Q8KBK0) DNA translocase ftsK| Length = 804 Score = 27.3 bits (59), Expect = 9.1 Identities = 23/79 (29%), Positives = 36/79 (45%) Frame = -2 Query: 383 FVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTPKRAKKKREEMSSVLRKMR 204 F+ + I V+GF +LL + RA + KR+ R +KK E M++VL K + Sbjct: 158 FIVDTIAGVSGF------FGKLLATVQAIRAERHRKRREKEEMRVRKKAERMAAVLEKEQ 211 Query: 203 SXXXXXXGDKKK*NFASRQ 147 +K AS+Q Sbjct: 212 RKRDKKAQRARKAGDASKQ 230
>BAT4_CAEEL (Q09655) Protein BAT4 homolog| Length = 371 Score = 27.3 bits (59), Expect = 9.1 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Frame = -2 Query: 386 LFVRNLIREVAGFAPYEKRITELLKVGKDKRALK-VAKRKLGTPKRAKKKREEMS 225 L L+++V F P+++ + LKV K K + K+KL + AK R + + Sbjct: 304 LGAEKLVKKVTHFGPFDRNAVKNLKVAKVPTTKKDIIKQKLKEDRIAKNFRADFA 358 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,443,621 Number of Sequences: 219361 Number of extensions: 736070 Number of successful extensions: 2740 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 2657 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2739 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 1386249648 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
