>ref|XM_469412.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2686

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 178  agcagcgtgtacggcacctccacgggcccgttccggttc 216
            |||||| ||||||||| || ||| |||||||||||||||
Sbjct: 2364 agcagcatgtacggcatcttcaccggcccgttccggttc 2326

>ref|XM_469411.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3165

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 178  agcagcgtgtacggcacctccacgggcccgttccggttc 216
            |||||| ||||||||| || ||| |||||||||||||||
Sbjct: 2843 agcagcatgtacggcatcttcaccggcccgttccggttc 2805

>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16
             map S2606, complete sequence
          Length = 124140

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                    
Query: 178   agcagcgtgtacggcacctccacgggcccgttccggttc 216
             |||||| ||||||||| || ||| |||||||||||||||
Sbjct: 65734 agcagcatgtacggcatcttcaccggcccgttccggttc 65696

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                       
Query: 178      agcagcgtgtacggcacctccacgggcccgttccggttc 216
                |||||| ||||||||| || ||| |||||||||||||||
Sbjct: 27821604 agcagcatgtacggcatcttcaccggcccgttccggttc 27821566

>gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual positional specificity
            lipoxygenase mRNA, complete cds
          Length = 3154

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 178  agcagcgtgtacggcacctccacgggcccgttccggttc 216
            |||||| ||||||||| || ||| |||||||||||||||
Sbjct: 2837 agcagcatgtacggcatcttcaccggcccgttccggttc 2799

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                       
Query: 178      agcagcgtgtacggcacctccacgggcccgttccggttc 216
                |||||| ||||||||| || ||| |||||||||||||||
Sbjct: 27912928 agcagcatgtacggcatcttcaccggcccgttccggttc 27912890

>dbj|AK105792.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H08, full
            insert sequence
          Length = 1560

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 178  agcagcgtgtacggcacctccacgggcccgttccggttc 216
            |||||| ||||||||| || ||| |||||||||||||||
Sbjct: 1250 agcagcatgtacggcatcttcaccggcccgttccggttc 1212

>dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143O17, full
            insert sequence
          Length = 2851

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 178  agcagcgtgtacggcacctccacgggcccgttccggttc 216
            |||||| ||||||||| || ||| |||||||||||||||
Sbjct: 2515 agcagcatgtacggcatcttcaccggcccgttccggttc 2477

>dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143H13, full
            insert sequence
          Length = 3167

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 178  agcagcgtgtacggcacctccacgggcccgttccggttc 216
            |||||| ||||||||| || ||| |||||||||||||||
Sbjct: 2845 agcagcatgtacggcatcttcaccggcccgttccggttc 2807

>dbj|AK071121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079P11, full
            insert sequence
          Length = 1726

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 178  agcagcgtgtacggcacctccacgggcccgttccggttc 216
            |||||| ||||||||| || ||| |||||||||||||||
Sbjct: 1415 agcagcatgtacggcatcttcaccggcccgttccggttc 1377

>gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, complete cds
          Length = 3003

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 178  agcagcgtgtacggcacctccacgggcccgttccggttc 216
            |||||| |||| |||| || |||||||||||||||||||
Sbjct: 2682 agcagcatgtagggcatcttcacgggcccgttccggttc 2644

>gb|AY110012.1| Zea mays CL907_1 mRNA sequence
          Length = 2928

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                  
Query: 170  tcggcgtgagcagcgtgtacggcacctccacgggcccgttccggttcctcagcg 223
            ||||| |||||||||| || |||||||||||  ||||  |||||||| ||||||
Sbjct: 2698 tcggcttgagcagcgtatagggcacctccacctgccccgtccggttcttcagcg 2645

>dbj|AP007174.1| Aspergillus oryzae RIB40 genomic DNA, SC103
          Length = 1282697

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 118    acggcgatgctgttgggaatc 138
              |||||||||||||||||||||
Sbjct: 222524 acggcgatgctgttgggaatc 222544

>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 290    gcgccctggccgcccgctgc 309
              ||||||||||||||||||||
Sbjct: 518323 gcgccctggccgcccgctgc 518342

>ref|XM_782245.1| PREDICTED: Strongylocentrotus purpuratus similar to CG5590-PA
           (LOC582286), mRNA
          Length = 2702

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 240 cttcttgacggcttccgcgacggc 263
           |||||||||||||||| |||||||
Sbjct: 327 cttcttgacggcttcctcgacggc 304

>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 288     cagcgccctggccgcccgct 307
               ||||||||||||||||||||
Sbjct: 3302208 cagcgccctggccgcccgct 3302227

>emb|X03756.1|SCPSB242 Streptomyces cyanogenus plasmid pSB24.2 DNA
          Length = 3706

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 250  gcttccgcgacggcgtccag 269
            ||||||||||||||||||||
Sbjct: 2470 gcttccgcgacggcgtccag 2489

>gb|AC123880.18| Mus musculus chromosome 3, clone RP23-225M12, complete sequence
          Length = 224562

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 72     atcttattattgcacatgatattg 95
              ||||||||||||||||| ||||||
Sbjct: 109548 atcttattattgcacattatattg 109525

>gb|M38300.1|SB2PSBA Plasmid pSB24.2 (from S.cyanogenus) replication-associated protein
            (psbA) gene, complete cds
          Length = 3706

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 250  gcttccgcgacggcgtccag 269
            ||||||||||||||||||||
Sbjct: 2470 gcttccgcgacggcgtccag 2489


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,720,437
Number of Sequences: 3902068
Number of extensions: 1720437
Number of successful extensions: 30543
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 30325
Number of HSP's gapped (non-prelim): 218
length of query: 358
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 336
effective length of database: 17,147,199,772
effective search space: 5761459123392
effective search space used: 5761459123392
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)