Clone Name | rbastl39a09 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | TRPF_SULAC (Q4J8X6) N-(5'-phosphoribosyl)anthranilate isomerase ... | 31 | 1.3 | 2 | RLR1_YEAST (P53552) Protein RLR1 (Protein THO2) | 28 | 8.3 |
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>TRPF_SULAC (Q4J8X6) N-(5'-phosphoribosyl)anthranilate isomerase (EC 5.3.1.24)| (PRAI) Length = 199 Score = 30.8 bits (68), Expect = 1.3 Identities = 13/25 (52%), Positives = 21/25 (84%) Frame = +3 Query: 315 TSGMLKDSFRAKISLGFNVLLDSKM 389 +S M ++ FR+ IS+GFNVL+DS++ Sbjct: 102 SSDMYQEYFRSVISMGFNVLVDSEI 126
>RLR1_YEAST (P53552) Protein RLR1 (Protein THO2)| Length = 1597 Score = 28.1 bits (61), Expect = 8.3 Identities = 18/49 (36%), Positives = 27/49 (55%) Frame = +2 Query: 95 VVKWYSNVLLHTRTFFLAYGLLKIERLLVSLYTSLTAKGETEASRTTVM 241 V+K Y VL + + G + E LL LYTS+T+ GE++ T +M Sbjct: 423 VLKQYPKVLYVSESLSRYLGRV-FEYLLNPLYTSMTSSGESKDMATALM 470 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,487,444 Number of Sequences: 219361 Number of extensions: 910833 Number of successful extensions: 1704 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1683 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1704 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)