ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl39a09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TRPF_SULAC (Q4J8X6) N-(5'-phosphoribosyl)anthranilate isomerase ... 31 1.3
2RLR1_YEAST (P53552) Protein RLR1 (Protein THO2) 28 8.3

>TRPF_SULAC (Q4J8X6) N-(5'-phosphoribosyl)anthranilate isomerase (EC 5.3.1.24)|
           (PRAI)
          Length = 199

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 13/25 (52%), Positives = 21/25 (84%)
 Frame = +3

Query: 315 TSGMLKDSFRAKISLGFNVLLDSKM 389
           +S M ++ FR+ IS+GFNVL+DS++
Sbjct: 102 SSDMYQEYFRSVISMGFNVLVDSEI 126



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>RLR1_YEAST (P53552) Protein RLR1 (Protein THO2)|
          Length = 1597

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 18/49 (36%), Positives = 27/49 (55%)
 Frame = +2

Query: 95  VVKWYSNVLLHTRTFFLAYGLLKIERLLVSLYTSLTAKGETEASRTTVM 241
           V+K Y  VL  + +     G +  E LL  LYTS+T+ GE++   T +M
Sbjct: 423 VLKQYPKVLYVSESLSRYLGRV-FEYLLNPLYTSMTSSGESKDMATALM 470


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,487,444
Number of Sequences: 219361
Number of extensions: 910833
Number of successful extensions: 1704
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1704
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2169600302
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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