ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl39a06 |
|---|---|
| Clone Library Name | barley_pub |
>CUL4B_HUMAN (Q13620) Cullin-4B (CUL-4B)| Length = 895 Score = 151 bits (381), Expect = 9e-37 Identities = 71/92 (77%), Positives = 82/92 (89%) Frame = -2 Query: 462 KVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKFPI 283 K+N IQMKETVEE STTERVFQDRQYQ+DAAIVRIMK RKTLSH LL++E++ QLKFP+ Sbjct: 804 KINQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPV 863 Query: 282 KPADTKKRIESLIDREYLERDRSNPQIYNYLA 187 KPAD KKRIESLIDR+Y+ERD+ NP YNY+A Sbjct: 864 KPADLKKRIESLIDRDYMERDKENPNQYNYIA 895
>CUL4A_HUMAN (Q13619) Cullin-4A (CUL-4A)| Length = 659 Score = 147 bits (370), Expect = 2e-35 Identities = 69/92 (75%), Positives = 80/92 (86%) Frame = -2 Query: 462 KVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKFPI 283 K+N IQMKETVEE STTERVFQDRQYQ+DAAIVRIMK RKTL H LL++EL+ QLKFP+ Sbjct: 568 KINQIQMKETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPV 627 Query: 282 KPADTKKRIESLIDREYLERDRSNPQIYNYLA 187 KP D KKRIESLIDR+Y+ERD+ NP Y+Y+A Sbjct: 628 KPGDLKKRIESLIDRDYMERDKDNPNQYHYVA 659
>CUL4_CAEEL (Q17392) Cullin-4| Length = 840 Score = 104 bits (260), Expect = 1e-22 Identities = 49/92 (53%), Positives = 64/92 (69%) Frame = -2 Query: 462 KVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKFPI 283 ++ + +K VEE E V DRQY++DAA+VRIMK RK L+H L+TEL QQL+FP+ Sbjct: 749 RIAQVNIKTAVEETKEVKEEVNSDRQYKIDAAVVRIMKARKQLNHQTLMTELLQQLRFPV 808 Query: 282 KPADTKKRIESLIDREYLERDRSNPQIYNYLA 187 AD KKR+ESLI+REY+ RD YNY+A Sbjct: 809 STADIKKRLESLIEREYISRDPEEASSYNYVA 840
>CUL1_ARATH (Q94AH6) Cullin-1| Length = 738 Score = 83.6 bits (205), Expect = 2e-16 Identities = 43/84 (51%), Positives = 56/84 (66%), Gaps = 2/84 (2%) Frame = -2 Query: 432 VEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKFPIKP--ADTKKR 259 V+E E V +DR+Y +DAAIVRIMK+RK L H L++E +QL KP KKR Sbjct: 655 VDERKKVVEDVDKDRRYAIDAAIVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKR 714 Query: 258 IESLIDREYLERDRSNPQIYNYLA 187 +E LI R+YLERD+ NP ++ YLA Sbjct: 715 MEDLITRDYLERDKENPNMFRYLA 738
>CUL3_MOUSE (Q9JLV5) Cullin-3 (CUL-3)| Length = 768 Score = 78.6 bits (192), Expect = 7e-15 Identities = 41/91 (45%), Positives = 60/91 (65%), Gaps = 2/91 (2%) Frame = -2 Query: 453 AIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLK--FPIK 280 A + E+ E T ++V DR+++++AAIVRIMK+RK + H +L+ E+ QQLK F Sbjct: 678 AAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPS 737 Query: 279 PADTKKRIESLIDREYLERDRSNPQIYNYLA 187 P KKRIE LI+REYL R + ++Y Y+A Sbjct: 738 PVVIKKRIEGLIEREYLARTPEDRKVYTYVA 768
>CUL3_HUMAN (Q13618) Cullin-3 (CUL-3)| Length = 768 Score = 78.6 bits (192), Expect = 7e-15 Identities = 41/91 (45%), Positives = 60/91 (65%), Gaps = 2/91 (2%) Frame = -2 Query: 453 AIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLK--FPIK 280 A + E+ E T ++V DR+++++AAIVRIMK+RK + H +L+ E+ QQLK F Sbjct: 678 AAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPS 737 Query: 279 PADTKKRIESLIDREYLERDRSNPQIYNYLA 187 P KKRIE LI+REYL R + ++Y Y+A Sbjct: 738 PVVIKKRIEGLIEREYLARTPEDRKVYTYVA 768
>CUL3_CAEEL (Q17391) Cullin-3| Length = 777 Score = 75.1 bits (183), Expect = 8e-14 Identities = 41/86 (47%), Positives = 57/86 (66%), Gaps = 2/86 (2%) Frame = -2 Query: 438 ETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQL--KFPIKPADTK 265 E+ E T ++V DR+ +V+AAIVRIMK RK L+H L+ E+ QQL +F P K Sbjct: 692 ESEPEIRETRQKVEDDRKLEVEAAIVRIMKARKKLNHNNLVAEVTQQLRHRFMPSPIIIK 751 Query: 264 KRIESLIDREYLERDRSNPQIYNYLA 187 +RIE+LI+REYL RD + + Y Y+A Sbjct: 752 QRIETLIEREYLARDEHDHRAYQYIA 777
>CUL3_SCHPO (Q09760) Cullin-3 (Cul-3)| Length = 785 Score = 74.7 bits (182), Expect = 1e-13 Identities = 40/86 (46%), Positives = 54/86 (62%), Gaps = 2/86 (2%) Frame = -2 Query: 438 ETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQL--KFPIKPADTK 265 E E T E+V + R++Q DA IVR+MK RK H L+ E+ +QL +F P K Sbjct: 700 EDDSERKRTLEKVDESRKHQADACIVRVMKDRKVCEHNQLMAEVTRQLNPRFHPSPMMIK 759 Query: 264 KRIESLIDREYLERDRSNPQIYNYLA 187 +RIE+LI+REYL+R N +IY YLA Sbjct: 760 RRIEALIEREYLQRQADNGRIYEYLA 785
>CUL2_PONPY (Q5RCF3) Cullin-2 (CUL-2)| Length = 745 Score = 69.7 bits (169), Expect = 3e-12 Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 2/94 (2%) Frame = -2 Query: 462 KVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKFPI 283 K+ K+T +E T V +DR+ + AAIVRIMK RK L H LI E+ Q + Sbjct: 652 KITTSMQKDTPQEMEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARF 711 Query: 282 KPADT--KKRIESLIDREYLERDRSNPQIYNYLA 187 P+ + KK IE LID++Y+ER +++ Y+Y+A Sbjct: 712 NPSISMIKKCIEVLIDKQYIERSQASADEYSYVA 745
>CUL2_HUMAN (Q13617) Cullin-2 (CUL-2)| Length = 745 Score = 69.7 bits (169), Expect = 3e-12 Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 2/94 (2%) Frame = -2 Query: 462 KVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKFPI 283 K+ K+T +E T V +DR+ + AAIVRIMK RK L H LI E+ Q + Sbjct: 652 KITTSMQKDTPQEMEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARF 711 Query: 282 KPADT--KKRIESLIDREYLERDRSNPQIYNYLA 187 P+ + KK IE LID++Y+ER +++ Y+Y+A Sbjct: 712 NPSISMIKKCIEVLIDKQYIERSQASADEYSYVA 745
>CUL2_MOUSE (Q9D4H8) Cullin-2 (CUL-2)| Length = 745 Score = 69.3 bits (168), Expect = 4e-12 Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 2/94 (2%) Frame = -2 Query: 462 KVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKFPI 283 K+ K+T +E T V +DR+ + AAIVRIMK RK L H LI E+ Q + Sbjct: 652 KITTSMQKDTPQELEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARF 711 Query: 282 KPADT--KKRIESLIDREYLERDRSNPQIYNYLA 187 P+ + KK IE LID++Y+ER +++ Y+Y+A Sbjct: 712 NPSISMIKKCIEVLIDKQYIERSQASADEYSYVA 745
>CUL2_CAEEL (Q17390) Cullin-2| Length = 776 Score = 69.3 bits (168), Expect = 4e-12 Identities = 42/97 (43%), Positives = 58/97 (59%), Gaps = 5/97 (5%) Frame = -2 Query: 462 KVNAIQMKETVE---ENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLK 292 ++ A Q+ + VE E + T +V QDR+Y ++ AIVRIMKTRK L H L+TE+ Q K Sbjct: 681 RLQAPQVNKAVEKEQEAVANTFQVSQDRKYYMECAIVRIMKTRKVLKHNALVTEIMDQTK 740 Query: 291 FPIKP--ADTKKRIESLIDREYLERDRSNPQIYNYLA 187 P KK IE LI++ Y++R N + Y YLA Sbjct: 741 GRFSPDVPFIKKSIEDLIEKMYIQRTDQNDE-YQYLA 776
>CUL6_CAEEL (Q21346) Cullin-6| Length = 729 Score = 67.8 bits (164), Expect = 1e-11 Identities = 38/88 (43%), Positives = 52/88 (59%), Gaps = 3/88 (3%) Frame = -2 Query: 441 KETVEENTSTTERVFQ-DRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKFPIKP--AD 271 K T + T + + DR+Y++ A IVRIMKTRK+L+HTLLI E+ QLK P Sbjct: 642 KATADRETDAVQNTVESDRKYEIKACIVRIMKTRKSLTHTLLINEIISQLKSRFTPNVQM 701 Query: 270 TKKRIESLIDREYLERDRSNPQIYNYLA 187 K IE LI++ Y+ R + +Y YLA Sbjct: 702 IKICIEILIEQLYIRRSENEHNVYEYLA 729
>CUL4_SCHPO (O14122) Cullin-4 (Cul-4)| Length = 734 Score = 67.0 bits (162), Expect = 2e-11 Identities = 35/93 (37%), Positives = 60/93 (64%), Gaps = 2/93 (2%) Frame = -2 Query: 462 KVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKFPI 283 K+N I +KE +EN+ E+V +DRQ+++ A+IVR+MK ++ + H L+ + +K Sbjct: 643 KINQIYLKEERQENSDVQEQVVRDRQFELQASIVRVMKQKEKMKHDDLVQYVINNVKDRG 702 Query: 282 KP--ADTKKRIESLIDREYLERDRSNPQIYNYL 190 P +D K IE L+++EYLER+ ++ IY Y+ Sbjct: 703 IPLVSDVKTAIEKLLEKEYLEREDND--IYTYV 733
>CUL1_DROME (Q24311) Cullin homolog 1 (Lin-19 homolog protein)| Length = 774 Score = 65.9 bits (159), Expect = 5e-11 Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 2/93 (2%) Frame = -2 Query: 459 VNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKFPIK 280 +N E E + + + +DR+ + AAIVRIMK RK L+HT LI+E+ QL K Sbjct: 682 INQPLKTELKVEQETVHKHIEEDRKLLIQAAIVRIMKMRKRLNHTNLISEVLNQLSTRFK 741 Query: 279 P--ADTKKRIESLIDREYLERDRSNPQIYNYLA 187 P KK I+ LI++EYLER + Y+YLA Sbjct: 742 PKVPVIKKCIDILIEKEYLERMEGHKDTYSYLA 774
>CUL1_PONPY (Q5R4G6) Cullin-1 (CUL-1)| Length = 776 Score = 65.1 bits (157), Expect = 8e-11 Identities = 38/93 (40%), Positives = 52/93 (55%), Gaps = 2/93 (2%) Frame = -2 Query: 459 VNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKFPIK 280 +N E +E +T + + +DR+ + AAIVRIMK RK L H L+ E+ QL K Sbjct: 684 INVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFK 743 Query: 279 P--ADTKKRIESLIDREYLERDRSNPQIYNYLA 187 P KK I+ LI++EYLER Y+YLA Sbjct: 744 PRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA 776
>CUL1_MOUSE (Q9WTX6) Cullin-1 (CUL-1)| Length = 776 Score = 65.1 bits (157), Expect = 8e-11 Identities = 38/93 (40%), Positives = 52/93 (55%), Gaps = 2/93 (2%) Frame = -2 Query: 459 VNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKFPIK 280 +N E +E +T + + +DR+ + AAIVRIMK RK L H L+ E+ QL K Sbjct: 684 INVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFK 743 Query: 279 P--ADTKKRIESLIDREYLERDRSNPQIYNYLA 187 P KK I+ LI++EYLER Y+YLA Sbjct: 744 PRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA 776
>CUL1_HUMAN (Q13616) Cullin-1 (CUL-1)| Length = 776 Score = 65.1 bits (157), Expect = 8e-11 Identities = 38/93 (40%), Positives = 52/93 (55%), Gaps = 2/93 (2%) Frame = -2 Query: 459 VNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKFPIK 280 +N E +E +T + + +DR+ + AAIVRIMK RK L H L+ E+ QL K Sbjct: 684 INVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFK 743 Query: 279 P--ADTKKRIESLIDREYLERDRSNPQIYNYLA 187 P KK I+ LI++EYLER Y+YLA Sbjct: 744 PRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA 776
>CUL1_SCHPO (O13790) Cullin-1 (Cul-1) (Cell division control 53 homolog)| Length = 767 Score = 63.9 bits (154), Expect = 2e-10 Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 2/82 (2%) Frame = -2 Query: 438 ETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLK--FPIKPADTK 265 E +E+ T + + +DR+ + +AIVRIMK R+TL H +L+ E Q+K F K +D K Sbjct: 684 EQKQESLETHKTIEEDRKLLLQSAIVRIMKARRTLKHVVLVKETIDQIKSRFTPKVSDIK 743 Query: 264 KRIESLIDREYLERDRSNPQIY 199 + I+ LI++EYLER + IY Sbjct: 744 QCIDMLIEKEYLERQGRDEYIY 765
>CUL1_CAEEL (Q17389) Cullin-1 (Abnormal cell lineage protein 19)| Length = 780 Score = 61.2 bits (147), Expect = 1e-09 Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 2/87 (2%) Frame = -2 Query: 441 KETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQL--KFPIKPADT 268 ++ V + + + V +DR+ + A IVRIMKTRK + H L+TE+ QL +F K Sbjct: 694 QDAVRDTENVQKNVEEDRKSVISACIVRIMKTRKRVQHQQLMTEVITQLSGRFKPKVEMI 753 Query: 267 KKRIESLIDREYLERDRSNPQIYNYLA 187 K+ I SLI++EY+ R +Y YLA Sbjct: 754 KRCIGSLIEKEYMLRTEGQKDLYEYLA 780
>CUL3_YEAST (P53202) Cullin-3 (Cullin-B)| Length = 744 Score = 50.1 bits (118), Expect = 3e-06 Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 2/67 (2%) Frame = -2 Query: 381 QVDAAIVRIMKTRKTLSHTLLI--TELFQQLKFPIKPADTKKRIESLIDREYLERDRSNP 208 ++ A IVRIMKT LSH L+ T Q + + P+ K+ I+ LI++EY++R+ +P Sbjct: 678 ELSAIIVRIMKTEGKLSHQQLLERTTKRTQSRLSLTPSILKRSIQLLIEKEYIQRNADDP 737 Query: 207 QIYNYLA 187 Y+YL+ Sbjct: 738 SYYHYLS 744
>CDC53_YEAST (Q12018) Cell division control protein 53 (Cullin-A) (E3 ubiquitin| ligase complex SCF subunit CDC53) Length = 815 Score = 49.7 bits (117), Expect = 4e-06 Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 2/86 (2%) Frame = -2 Query: 438 ETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQ--LKFPIKPADTK 265 E +E+ +T ++F ++A IVRIMK ++ L HT L+ E Q +F K + K Sbjct: 737 ERIEKELNTERQIF------LEACIVRIMKAKRNLPHTTLVNECIAQSHQRFNAKVSMVK 790 Query: 264 KRIESLIDREYLERDRSNPQIYNYLA 187 + I+SLI + YL+R + + Y YLA Sbjct: 791 RAIDSLIQKGYLQRG-DDGESYAYLA 815
>CUL5_PONPY (Q5RB36) Cullin-5 (CUL-5)| Length = 780 Score = 47.8 bits (112), Expect = 1e-05 Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 4/96 (4%) Frame = -2 Query: 462 KVNAIQMKETVEENTSTTER--VFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKF 289 K+N I + E E + Q R + AI++IMK RK +S+ L TEL + LK Sbjct: 685 KINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEILKN 744 Query: 288 PIKPAD--TKKRIESLIDREYLERDRSNPQIYNYLA 187 P K++IE LI+ +Y+ RD S+ + Y+A Sbjct: 745 MFLPQKKMIKEQIEWLIEHKYIRRDESDINTFIYMA 780
>CUL5_HUMAN (Q93034) Cullin-5 (CUL-5) (Vasopressin-activated calcium-mobilizing| receptor) (VACM-1) Length = 780 Score = 47.8 bits (112), Expect = 1e-05 Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 4/96 (4%) Frame = -2 Query: 462 KVNAIQMKETVEENTSTTER--VFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKF 289 K+N I + E E + Q R + AI++IMK RK +S+ L TEL + LK Sbjct: 685 KINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEILKN 744 Query: 288 PIKPAD--TKKRIESLIDREYLERDRSNPQIYNYLA 187 P K++IE LI+ +Y+ RD S+ + Y+A Sbjct: 745 MFLPQKKMIKEQIEWLIEHKYIRRDESDINTFIYMA 780
>CUL5_RAT (Q9JJ31) Cullin-5 (CUL-5) (Vasopressin-activated calcium-mobilizing| receptor) (VACM-1) Length = 780 Score = 46.6 bits (109), Expect = 3e-05 Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 4/96 (4%) Frame = -2 Query: 462 KVNAIQMKETVEENTSTTER--VFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKF 289 K+N I + E E + Q R + AI++IMK RK +S+ L TEL + LK Sbjct: 685 KINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEILKN 744 Query: 288 PIKPAD--TKKRIESLIDREYLERDRSNPQIYNYLA 187 P K++IE LI+ +Y+ RD ++ + Y+A Sbjct: 745 MFLPQKKMIKEQIEWLIEHKYIRRDEADINTFIYMA 780
>CUL5_MOUSE (Q9D5V5) Cullin-5 (CUL-5)| Length = 780 Score = 45.1 bits (105), Expect = 9e-05 Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 4/96 (4%) Frame = -2 Query: 462 KVNAIQMKETVEENTSTTER--VFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKF 289 K+N I + E E + Q R + AI++IMK RK +S+ L TEL + LK Sbjct: 685 KINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEILKN 744 Query: 288 PIKPAD--TKKRIESLIDREYLERDRSNPQIYNYLA 187 P K+++E LI+ Y+ RD ++ + Y+A Sbjct: 745 MFLPQKKMIKEQMEWLIEHRYIRRDEADINTFIYMA 780
>CUL5_RABIT (Q29425) Cullin-5 (CUL-5) (Vasopressin-activated calcium-mobilizing| receptor) (VACM-1) Length = 780 Score = 43.1 bits (100), Expect = 3e-04 Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 4/96 (4%) Frame = -2 Query: 462 KVNAIQMKETVEENTSTTER--VFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKF 289 K+N I + E E + Q R + ++IMK RK +S+ L TEL + LK Sbjct: 685 KINLIGRLQLTTERMREEENEGIVQLRILRTRKLYIQIMKMRKKISNAQLQTELVEILKN 744 Query: 288 PIKPAD--TKKRIESLIDREYLERDRSNPQIYNYLA 187 P K++IE LI+ +Y+ RD S+ + Y+A Sbjct: 745 MFLPQKKMIKEQIEWLIEHKYIRRDESDINTFIYMA 780
>CUL5_CAEEL (Q23639) Cullin-5| Length = 741 Score = 40.8 bits (94), Expect = 0.002 Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 4/96 (4%) Frame = -2 Query: 462 KVNAI-QMKETVEENTSTT-ERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLK- 292 KVN I +++ ++E N E + R+ +V IV+I+KTRKT + L EL + LK Sbjct: 646 KVNLIGRLQLSLEANAEKEHESIVALRELRVQEGIVKILKTRKTYTLAQLTMELVEILKP 705 Query: 291 -FPIKPADTKKRIESLIDREYLERDRSNPQIYNYLA 187 F K++I+ LI+ +Y+ER + + Y++ Sbjct: 706 LFIPNRKIIKEQIDWLIENKYMERRADDINTFVYIS 741
>Y835_RICCN (Q92HD6) Hypothetical UPF0192 protein RC0835 precursor| Length = 1892 Score = 30.8 bits (68), Expect = 1.8 Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 16/91 (17%) Frame = -2 Query: 414 TTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKFPIKPADTK---------- 265 TT F+ + A +V++ + KT + L ++ FQ ++ P P + K Sbjct: 358 TTMHSFKVDTFASRALLVKVNQGVKTSDNLTLGSDYFQIVQIPDNPKEVKLMSDGSILSL 417 Query: 264 --KR---IESL-IDREYLERDRSNPQIYNYL 190 KR + SL ID+ YLE DR N Q N+L Sbjct: 418 AGKRKLPVYSLGIDKLYLEIDRINQQEVNHL 448
>U520_CAEEL (Q9U2G0) Putative U5 small nuclear ribonucleoprotein 200 kDa helicase| (EC 3.6.1.-) Length = 2145 Score = 29.3 bits (64), Expect = 5.1 Identities = 11/35 (31%), Positives = 21/35 (60%) Frame = +2 Query: 35 IRIQKMFQRLQLPKRENKEQGNSNTELLYTVYFSQ 139 + +QKM + +P +EN ++ ++ T +L Y SQ Sbjct: 1028 LELQKMAEHAPIPIKENLDEASAKTNVLLQAYISQ 1062
>IF3A_ARATH (Q9LD55) Eukaryotic translation initiation factor 3 subunit 10| (eIF-3 theta) (Eukaryotic translation initiation factor 3 large subunit) (eIF3a) (p114) Length = 987 Score = 28.5 bits (62), Expect = 8.7 Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 12/97 (12%) Frame = -2 Query: 453 AIQMKETVEENTSTTERVFQDRQYQVDAAIVRI-----MKTRKTLSHTLLITELFQ---- 301 A + E + ER F +R+ Q + + + +K + LS L E+FQ Sbjct: 699 AAPLIEAAYQRRLVEEREFYEREQQREVELSKERHESDLKEKNRLSRMLGNKEIFQAQVI 758 Query: 300 ---QLKFPIKPADTKKRIESLIDREYLERDRSNPQIY 199 Q +F + ++RI +I + ERD QIY Sbjct: 759 SRRQAEFDRIRTEREERISKIIREKKQERDIKRKQIY 795
>DNS2B_HUMAN (Q8WZ79) Deoxyribonuclease-2-beta precursor (EC 3.1.22.1)| (Deoxyribonuclease II beta) (DNase II beta) (DNase2-like acid DNase) (DNase II-like acid DNase) (Endonuclease DLAD) Length = 361 Score = 28.5 bits (62), Expect = 8.7 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = +2 Query: 53 FQRLQLPKRENKEQGNSNTELLY 121 F +LPKR+NKE G + E LY Sbjct: 43 FTFYKLPKRQNKESGETGLEYLY 65
>YC8A_METJA (P81318) Hypothetical protein MJ1282.1| Length = 254 Score = 28.5 bits (62), Expect = 8.7 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = -3 Query: 149 SYFIARNTLCKVIPYCCFLVLCSLSSG 69 ++ I N + VIPYC F++L +L +G Sbjct: 132 TFIIFLNAILFVIPYCIFILLINLKNG 158
>CAF1A_HUMAN (Q13111) Chromatin assembly factor 1 subunit A (CAF-1 subunit A)| (Chromatin assembly factor I p150 subunit) (CAF-I 150 kDa subunit) (CAF-Ip150) Length = 938 Score = 28.5 bits (62), Expect = 8.7 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = +3 Query: 387 DDLEILSQWCLCFLLLFPSSELHSP 461 DDL++L Q+ CFL P+ E +P Sbjct: 681 DDLKVLQQFAACFLETLPAQEEQTP 705 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,199,349 Number of Sequences: 219361 Number of extensions: 1182740 Number of successful extensions: 3252 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 3153 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3235 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2968155324 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
