Clone Name | rbastl39a05 |
---|---|
Clone Library Name | barley_pub |
>GNL3_XENTR (Q6P4W5) Guanine nucleotide-binding protein-like 3| (Nucleostemin-like protein) Length = 548 Score = 28.9 bits (63), Expect = 3.2 Identities = 17/68 (25%), Positives = 28/68 (41%) Frame = +2 Query: 32 DVPSRRTACFTLAPSKTKGCRQKAMTGTKLCTEKMDPRPFLTRAVPHMRNDYSPNGCNLN 211 ++P+ C APSK+ G + K LCTE P + + H + + Sbjct: 192 ELPTVPFRCLPQAPSKSPGKKHKVPNTADLCTENRCPGGQVLLRILHSLCPSQSDAIKVG 251 Query: 212 LLFFCMVG 235 ++ F VG Sbjct: 252 VIGFANVG 259
>TNF10_HUMAN (P50591) Tumor necrosis factor ligand superfamily member 10| (TNF-related apoptosis-inducing ligand) (TRAIL protein) (Apo-2 ligand) (Apo-2L) (CD253 antigen) Length = 281 Score = 28.5 bits (62), Expect = 4.1 Identities = 9/24 (37%), Positives = 17/24 (70%) Frame = +3 Query: 222 SAW*EIKSSHGYAKNLHVQNGDLM 293 ++W +S H + NLH++NG+L+ Sbjct: 152 NSWESSRSGHSFLSNLHLRNGELV 175
>YPUB_KLEPN (P20775) Hypothetical protein in pulS 3'region (Fragment)| Length = 142 Score = 28.1 bits (61), Expect = 5.4 Identities = 15/27 (55%), Positives = 19/27 (70%) Frame = +3 Query: 42 PVGQLVLP*HPAKQKDVDRRR*REQNY 122 P+G+ P PAKQK V RRR RE++Y Sbjct: 8 PIGRKGRPSRPAKQK-VTRRRVREEDY 33
>WRB_MOUSE (Q8K0D7) Tryptophan-rich protein| Length = 174 Score = 27.7 bits (60), Expect = 7.0 Identities = 14/53 (26%), Positives = 26/53 (49%) Frame = -2 Query: 182 RYACVVPRALETVWGPFFQCIILFPSSPSVYILLFCWVLR*NKLSYGTVHPFA 24 +Y V + + W ++ FP+ + I + CW+L NK+ +HPF+ Sbjct: 122 KYYSVPVAVVPSKWITPLDRLVAFPTRVAGGIGITCWILVCNKVVAIVLHPFS 174
>WRB_PONPY (Q5R6K7) Tryptophan-rich protein| Length = 174 Score = 27.3 bits (59), Expect = 9.2 Identities = 13/53 (24%), Positives = 26/53 (49%) Frame = -2 Query: 182 RYACVVPRALETVWGPFFQCIILFPSSPSVYILLFCWVLR*NKLSYGTVHPFA 24 +Y V + + W ++ FP+ + + + CW+L NK+ +HPF+ Sbjct: 122 KYYSVPVAVVPSKWITPLDRLVAFPTRVAGGVGITCWILVCNKVVAIVLHPFS 174
>WRB_HUMAN (O00258) Tryptophan-rich protein (Congenital heart disease 5| protein) Length = 174 Score = 27.3 bits (59), Expect = 9.2 Identities = 13/53 (24%), Positives = 26/53 (49%) Frame = -2 Query: 182 RYACVVPRALETVWGPFFQCIILFPSSPSVYILLFCWVLR*NKLSYGTVHPFA 24 +Y V + + W ++ FP+ + + + CW+L NK+ +HPF+ Sbjct: 122 KYYSVPVAVVPSKWITPLDRLVAFPTRVAGGVGITCWILVCNKVVAIVLHPFS 174 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,750,721 Number of Sequences: 219361 Number of extensions: 1070849 Number of successful extensions: 2241 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2205 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2241 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 1396778976 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)