>INCE_MOUSE (Q9WU62) Inner centromere protein|
          Length = 880

 Score = 31.2 bits (69), Expect = 0.64
 Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
 Frame = -1

Query: 360 VKRQAARGSRIGPTTGRAAGITVRRLISQNQ----KRGSRSMATASSGPLSCFVVYAVAS 193
           + R+ +R S++G    R+  +T+   + +N     +R +R+ A A++   +  V  A +S
Sbjct: 86  LSRRKSRSSQVGTRHLRSKPVTI---VEENGFPVLQRITRATAAAAAAAAAASVASASSS 142

Query: 192 LRASEPTYLPT*CAVAISTPSELS 121
             A  PT L     V IST   LS
Sbjct: 143 STAGSPTVLTKKAVVEISTSERLS 166

>RS6_BRUSU (Q8G274) 30S ribosomal protein S6|
          Length = 148

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -3

Query: 331 DRPDNRQGSWDNGEKTDKSESKERQ*KHGDG 239
           DRP  R+G +D G++ D+   + R  + G+G
Sbjct: 117 DRPRRREGGFDRGDRGDRGPRRPRDTEAGEG 147

>RS6_BRUME (Q8YFP0) 30S ribosomal protein S6|
          Length = 148

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -3

Query: 331 DRPDNRQGSWDNGEKTDKSESKERQ*KHGDG 239
           DRP  R+G +D G++ D+   + R  + G+G
Sbjct: 117 DRPRRREGGFDRGDRGDRGPRRPRDNEAGEG 147

>RS6_BRUAB (Q57ER2) 30S ribosomal protein S6|
          Length = 148

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -3

Query: 331 DRPDNRQGSWDNGEKTDKSESKERQ*KHGDG 239
           DRP  R+G +D G++ D+   + R  + G+G
Sbjct: 117 DRPRRREGGFDRGDRGDRGPRRPRDNEAGEG 147

>RS6_BRUA2 (Q2YMG9) 30S ribosomal protein S6|
          Length = 148

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -3

Query: 331 DRPDNRQGSWDNGEKTDKSESKERQ*KHGDG 239
           DRP  R+G +D G++ D+   + R  + G+G
Sbjct: 117 DRPRRREGGFDRGDRGDRGPRRPRDNEAGEG 147

>SUIS_RABIT (P07768) Sucrase-isomaltase, intestinal [Contains: Sucrase (EC|
           3.2.1.48); Isomaltase (EC 3.2.1.10)]
          Length = 1826

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 134 RLNCHVEEL*LKASCASYTCVFLPWNQTN 48
           R+NC  E+   +A CA   C + PWN ++
Sbjct: 73  RINCIPEQSPTQAICAQRNCCWRPWNNSD 101

>SUIS_RAT (P23739) Sucrase-isomaltase, intestinal [Contains: Sucrase (EC|
           3.2.1.48); Isomaltase (EC 3.2.1.10)]
          Length = 1840

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -2

Query: 134 RLNCHVEEL*LKASCASYTCVFLPWNQT 51
           R+NC  E+   KA C    C + PWN T
Sbjct: 83  RINCIPEQHPTKAICEERGCCWRPWNNT 110

>VE2_HPV38 (Q80910) Regulatory protein E2|
          Length = 441

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = -1

Query: 357 KRQAARGSRIGPTTGRAAGITVRRLISQNQKRGSRSMATASS 232
           +R ++RGS + PT GR  G    R      +  SRS++ ASS
Sbjct: 282 RRSSSRGSSVSPTRGRRRGGGDSRRRGPVTRSRSRSLSRASS 323

>Y2112_PYRAE (Q8ZVU9) UPF0095 protein PAE2112|
          Length = 408

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -1

Query: 303 GITVRRLISQNQKRGSRSMATASSGPLS 220
           GIT +R++    K+G + + TA +GPL+
Sbjct: 363 GITTQRIVDLAAKKGVKIIVTARTGPLT 390

>RMD1_YEAST (Q03441) Sporulation protein RMD1|
          Length = 430

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -3

Query: 115 KNCSLKHHVHPTLVFSCLGTKLIH 44
           K+C   HH HP L   CL T  I+
Sbjct: 149 KDCRKLHHTHPKLFDECLYTPFIY 172

>THT1_CAEEL (P91247) Putative thiosulfate sulfurtransferase F11G11.9 (EC|
           2.8.1.1)
          Length = 277

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +2

Query: 11  LASPTSGFIQKMY*FGSKARKHKCRMHMML*ATILLH 121
           LA+  SG + K+Y  G     +K   H+ +  T+LLH
Sbjct: 215 LAAARSGIVAKLYNGGVHELAYKAPQHLNMRVTLLLH 251

>HFW1_DROPS (P84329) Protein halfway (Protein singed wings)|
          Length = 587

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 178 FGGPQASYCIYNKTGQW 228
           F  P+ SYC+YN T +W
Sbjct: 316 FVNPKHSYCLYNATHEW 332

>SUIS_HUMAN (P14410) Sucrase-isomaltase, intestinal [Contains: Sucrase (EC|
           3.2.1.48); Isomaltase (EC 3.2.1.10)]
          Length = 1826

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 134 RLNCHVEEL*LKASCASYTCVFLPWNQT 51
           R+NC  E+   +  CA   C + PWN +
Sbjct: 73  RINCIPEQFPTEGICAQRGCCWRPWNDS 100

>CE152_HUMAN (O94986) Centrosomal protein of 152 kDa (Cep152 protein)|
          Length = 1275

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -3

Query: 364 DCQASGSEGQQDRPDNRQGSWDNGEKTDKSES 269
           DC   G++GQ   P+  + SW N +   KS+S
Sbjct: 55  DCSEDGTDGQPHHPEQLEMSW-NEQMLPKSQS 85


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,313,367
Number of Sequences: 219361
Number of extensions: 819635
Number of successful extensions: 1917
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1915
length of database: 80,573,946
effective HSP length: 98
effective length of database: 59,076,568
effective search space used: 1417837632
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)