>ADRB1_FELCA (Q9TST6) Beta-1 adrenergic receptor (Beta-1 adrenoceptor) (Beta-1|
           adrenoreceptor)
          Length = 474

 Score = 33.5 bits (75), Expect = 0.21
 Identities = 24/77 (31%), Positives = 35/77 (45%)
 Frame = -1

Query: 406 GPCNKPSAPGPEPGSNVAQAADTLVALSTPREKGK*QRKQPSCTADDPFGPCFGSLLLYM 227
           GP   PS P P PGS    A     A + P   G+  +++PS            +L + M
Sbjct: 268 GPARPPS-PAPAPGSPRPAATAAAAAAAAPLANGRISKRRPSRLVALREQKALKTLGIIM 326

Query: 226 *MFTRFMCWMVAWLAVV 176
            +FT  +CW+  +LA V
Sbjct: 327 GVFT--LCWLPFFLANV 341

>PTC1_MOUSE (Q61115) Protein patched homolog 1 (PTC1) (PTC)|
          Length = 1434

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 9/61 (14%)
 Frame = +3

Query: 87  VSLQINRN*QQIPLVCLFTPDLTAQVPP---ACTTASQATIQHM------KRVNIYMYSN 239
           VS ++N   Q+I    +F P L  Q P    A    ++A +QH+       RV++YMY+ 
Sbjct: 122 VSRELNYTRQKIGEEAMFNPQLMIQTPKEEGANVLTTEALLQHLDSALQASRVHVYMYNR 181

Query: 240 R 242
           +
Sbjct: 182 Q 182

>PTC1_HUMAN (Q13635) Protein patched homolog 1 (PTC1) (PTC)|
          Length = 1447

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 9/61 (14%)
 Frame = +3

Query: 87  VSLQINRN*QQIPLVCLFTPDLTAQVPP---ACTTASQATIQHM------KRVNIYMYSN 239
           VS ++N   Q+I    +F P L  Q P    A    ++A +QH+       RV++YMY+ 
Sbjct: 136 VSRELNYTRQKIGEEAMFNPQLMIQTPKEEGANVLTTEALLQHLDSALQASRVHVYMYNR 195

Query: 240 R 242
           +
Sbjct: 196 Q 196

>MCSP_HUMAN (P49901) Sperm mitochondrial-associated cysteine-rich protein|
          Length = 116

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
 Frame = +1

Query: 256 DQRGHRLCNSAVSSATCP----SLVELIGRRGCQPPERRCCQAQG 378
           DQ  H  C  A  +  CP       +  G + C P + +CCQ +G
Sbjct: 3   DQTKHSKCCPAKGNQCCPPQQNQCCQSKGNQCCPPKQNQCCQPKG 47



 Score = 29.3 bits (64), Expect = 4.0
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +1

Query: 274 LCNSAVSSATCPSLVELIGRRGCQPPERRCCQAQGRAPMAYCRVQILQP 420
           +C+    S  CP+     G + C P + +CCQ++G       + Q  QP
Sbjct: 1   MCDQTKHSKCCPAK----GNQCCPPQQNQCCQSKGNQCCPPKQNQCCQP 45

>ADRB1_PIG (Q28998) Beta-1 adrenergic receptor (Beta-1 adrenoceptor) (Beta-1|
           adrenoreceptor)
          Length = 468

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 21/73 (28%), Positives = 35/73 (47%)
 Frame = -1

Query: 394 KPSAPGPEPGSNVAQAADTLVALSTPREKGK*QRKQPSCTADDPFGPCFGSLLLYM*MFT 215
           +P +P P PGS +  A     A + P   G+  +++PS            +L + M +FT
Sbjct: 270 RPPSPAPSPGSPLPAA-----AAAAPVANGRTSKRRPSRLVALREQKALKTLGIIMGVFT 324

Query: 214 RFMCWMVAWLAVV 176
             +CW+  +LA V
Sbjct: 325 --LCWLPFFLANV 335

>CTNS_HUMAN (O60931) Cystinosin|
          Length = 367

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +3

Query: 162 VPPACTTAS-QATIQHMKRVNIYMYSNRDPKQGPK 263
           VPP  T +S Q T Q++ ++ +Y++ N   + GP+
Sbjct: 78  VPPGVTNSSFQVTSQNVGQLTVYLHGNHSNQTGPR 112

>ONEC2_MOUSE (Q6XBJ3) One cut domain family member 2 (Transcription factor|
           ONECUT-2) (OC-2)
          Length = 486

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +2

Query: 149 PNSTSSSRLYNGKPSHHPAHETGKHLHVQQ 238
           P ST S + ++  P HHP H    H H Q+
Sbjct: 139 PISTVSDKFHHPHPHHHPHHHHHHHHHHQR 168

>ACT22_STRCO (P46105) Probable actinorhodin transporter|
          Length = 578

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +3

Query: 324 DRATRVSAA*ATLLPGSGPGADGLLQGP 407
           D   R +A  + LLP  GPG DG   GP
Sbjct: 7   DEPDRATAPPSALLPEDGPGPDGTAAGP 34

>PTC1_CHICK (Q90693) Protein patched homolog 1 (PTC1) (PTC)|
          Length = 1442

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 9/61 (14%)
 Frame = +3

Query: 87  VSLQINRN*QQIPLVCLFTPDLTAQVPPACTT---ASQATIQHM------KRVNIYMYSN 239
           VS ++N   Q+I    +F P L  Q P    T    ++A  QH+       RV++YMY+ 
Sbjct: 136 VSRELNYTRQKIGEEAMFNPQLMIQTPQEDGTNVLTTEALRQHLDSALQASRVHVYMYNR 195

Query: 240 R 242
           +
Sbjct: 196 Q 196

>IF2_COREF (Q8FPA7) Translation initiation factor IF-2|
          Length = 964

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1

Query: 403 PCNKPSAPGPEPGSNVAQAADTLVALSTPR 314
           P  KP AP P+PG+     A T  A++ P+
Sbjct: 70  PAAKPGAPAPKPGTAQKPTAPTPGAVAAPK 99

>AES_ECOLI (P23872) Acetyl esterase (EC 3.1.1.-)|
          Length = 319

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +3

Query: 39  TDQKLLMFRV*QGDRYVSLQINRN*QQIPLVCLFTPDLTAQVPP 170
           T Q L M+     + Y+S   +R   + P  CLF  DLT +VPP
Sbjct: 217 TQQDLQMYE----EAYLSNDADR---ESPYYCLFNNDLTREVPP 253

>ACOX1_YARLI (O74934) Acyl-coenzyme A oxidase 1 (EC 1.3.3.6) (Acyl-CoA oxidase|
           1)
          Length = 689

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +1

Query: 19  DNSCQVQQIKSYLCSESDRVTGMYPYRLTETNSRSHWFVCLH 144
           D  C +QQ +       +RV  + PY +T+T   S W   LH
Sbjct: 59  DYDCNLQQARK---QTMERVAALSPYLVTDTEKLSLWRAQLH 97

>HSP1_PONPY (P35310) Sperm protamine P1 (Cysteine-rich protamine)|
          Length = 50

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 17/45 (37%), Positives = 20/45 (44%)
 Frame = +1

Query: 268 HRLCNSAVSSATCPSLVELIGRRGCQPPERRCCQAQGRAPMAYCR 402
           +R C S   S  C        R+ C    RRCCQ + RA M  CR
Sbjct: 3   YRCCRSQSQSRCCRR------RQRCHRRRRRCCQTRRRA-MRCCR 40

>ZN409_HUMAN (Q9UPU6) Zinc finger protein 409|
          Length = 862

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
 Frame = +3

Query: 135 LFTPDLTAQVPPACTTASQATIQHMKRVNIYMYSNRDPKQGPKGSS-----AVQLGCFLC 299
           + + D +A  P AC     A   +    N       DPK GP G+S     AV   C LC
Sbjct: 187 ILSHDTSAPSPAACEERHGAFWSYQLAPN----PPGDPKDGPMGNSGGNHVAVFWLCLLC 242

Query: 300 YLPFSR 317
            L FS+
Sbjct: 243 RLGFSK 248

>CAC1B_RABIT (Q05152) Voltage-dependent N-type calcium channel alpha-1B subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.2)
            (Calcium channel, L type, alpha-1 polypeptide isoform 5)
            (Brain calcium channel III) (BIII)
          Length = 2339

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 17/44 (38%), Positives = 20/44 (45%)
 Frame = -2

Query: 306  ASSRGNSRVAQPMTPLVPVLDLCCCTCKCLPVSCAGWWLGLPLY 175
            AS+ G  R   P TPL P   +   T    PV  AG   GLP +
Sbjct: 2180 ASTPGRGRRQLPQTPLTPRPSVTYKTANSSPVHFAGAPSGLPAF 2223

>WHRN_MOUSE (Q80VW5) Whirlin|
          Length = 906

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = -1

Query: 394 KPSAPGPEPGSNVAQAADTLVALSTPREK----GK*QRKQPSCTADDPFGPCFGSL 239
           +P  PG E  + ++ AA + +  S PR +    G      PS   D P  P + S+
Sbjct: 599 QPRKPGREDPAPLSSAAHSGIVFSAPRNRSPPPGTAPTPGPSSAQDSPSSPIYASI 654


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,017,739
Number of Sequences: 219361
Number of extensions: 1432850
Number of successful extensions: 4507
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4496
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)